Team:KU Leuven/Project

From 2013.igem.org

Revision as of 21:48, 4 October 2013 by FrederikM (Talk | contribs)

iGem

Secret garden

Congratulations! You've found our secret garden! Follow the instructions below and win a great prize at the World jamboree!


  • A video shows that two of our team members are having great fun at our favourite company. Do you know the name of the second member that appears in the video?
  • For one of our models we had to do very extensive computations. To prevent our own computers from overheating and to keep the temperature in our iGEM room at a normal level, we used a supercomputer. Which centre maintains this supercomputer? (Dutch abbreviation)
  • We organised a symposium with a debate, some seminars and 2 iGEM project presentations. An iGEM team came all the way from the Netherlands to present their project. What is the name of their city?

Now put all of these in this URL:https://2013.igem.org/Team:KU_Leuven/(firstname)(abbreviation)(city), (loose the brackets and put everything in lowercase) and follow the very last instruction to get your special jamboree prize!

tree ladybugcartoon

Our goal is to create a sustainable system to reduce the damage that aphids cause to our agricultural industry. The current solution usually requires huge amounts of insecticides, damaging ecosystems in several ways. First, the indiscriminate weakening of insects means that beneficial insects (pollinators, ...) are also affected. Second, insecticides affect vertebrates, including humans, damaging our health. Third, insecticide residues (catabolites) accumulate in each food-chain. The highest organism, be it humans or for example predatory birds, will end up with potentially high levels of residues and their negative effects.
We aim to offer an effective and sustainable alternative for insecticides. Our modified E. coli, the BanAphid (meaning ‘to ban aphids’ as well as with ‘benefits’), would produce the aphid’s own alarm pheromone, E-β-farnesene, (EBF) to repel them off the plant. On top of that we want to attract aphid predators such as the ladybug via the production of methyl salicylate (MeS), a phytohormone, by our BanAphids. This way we ensure aphids are thoroughly removed from the plant. More about this can be found here.
We have established some of the potential hurdles when introducing this system in agriculture. First, the plant’s metabolism should not be overburdened. Second, aphids might habituate to constitutive expression of EBF. Finally, we do not want to attract the aphid’s natural predators when they are not needed.
We devised two different systems that might use these molecules. One method would be to spray our BanAphids onto the plants. To minimise the burden on the plant’s metabolism and attract predators only when needed, our BanAphids will only produce MeS when aphids are present. Another way to avoid habituation of the aphids is an oscillating production of EBF, which requires a colony-wide synchronized oscillating system.
Our second method starts from the principle that the BanAphids may not come in direct contact (for instance, because of safety issues) with the plants and the aphids these would carry. To ensure this, we developed an oscillating system such that the BanAphids could alternate between MeS and EBF production without the "aphid present" signal. We will place our BanAphids in a container, isolated from the environment but producing MeS and EBF in an oscillating pattern, to prevent habituation. We turned to the sticker model of the Groningen 2012 iGEM team to use as a container. The sticker is composed of a plastic film, whose pores are too small for the BanAphids to pass but large enough so the volatile pheromones it produces still pass. The Groningen 2012 iGEM team has already investigated the biosafety of this sticker.

banaphids

Glucose Model
This drawing shows our BanAphid producing EBF and MeS to get rid of the aphids and attract a ladybug.

"Sticker" or "Oscillator" model
This drawing shows how the sticker could be placed in a rose bush to repel aphids and attract ladybugs.

Aphid Biology

Crashcourse in aphid biology.

Glucose Model

Our BanAphids react to honeydew.

Oscillator Model

An alternative approach

Ecology

An autonomous alternative.

Parts

BioBrick 'm all!

Data Page

Everything what we did summarized.