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Team:TU-Eindhoven/Notebook
From 2013.igem.org
(Difference between revisions)
| Line 36: | Line 36: | ||
* Researching about the promoters | * Researching about the promoters | ||
* Researching about the possible proteins for CEST imaging | * Researching about the possible proteins for CEST imaging | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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''Wetlab'' | ''Wetlab'' | ||
* Researching and defining the killing mechanism | * Researching and defining the killing mechanism | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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* Regular team meeting | * Regular team meeting | ||
* Looking for sponsors | * Looking for sponsors | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* Defining the needed materials | * Defining the needed materials | ||
* Defining the needed equipment | * Defining the needed equipment | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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* Regular team meeting | * Regular team meeting | ||
* Looking for sponsors | * Looking for sponsors | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* Locating, booking and learning how to use the necessary equipment | * Locating, booking and learning how to use the necessary equipment | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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* Regular team meeting | * Regular team meeting | ||
* Looking for sponsors | * Looking for sponsors | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* Locating, booking and learning how to use the necessary equipment | * Locating, booking and learning how to use the necessary equipment | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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* Collaborating with Purdue iGEM team | * Collaborating with Purdue iGEM team | ||
* Planning month activities | * Planning month activities | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* General construct design | * General construct design | ||
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''Drylab'' | ''Drylab'' | ||
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* Regular team meeting | * Regular team meeting | ||
* Looking for sponsors | * Looking for sponsors | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* Protein design | * Protein design | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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* Regular team meeting | * Regular team meeting | ||
* Looking for sponsors | * Looking for sponsors | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* Final design of the constructs | * Final design of the constructs | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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* Regular team meeting | * Regular team meeting | ||
* Looking for sponsors | * Looking for sponsors | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* Ordering the constructs | * Ordering the constructs | ||
* Working on the protocols | * Working on the protocols | ||
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''Drylab'' | ''Drylab'' | ||
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* Looking for sponsors | * Looking for sponsors | ||
* Planning month activities | * Planning month activities | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
* Finalizing the protocols | * Finalizing the protocols | ||
* Planning lab schedule | * Planning lab schedule | ||
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''Drylab'' | ''Drylab'' | ||
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* Looking for sponsors | * Looking for sponsors | ||
* Collaborating with Purdue iGEM team | * Collaborating with Purdue iGEM team | ||
| + | |||
''Drylab'' | ''Drylab'' | ||
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* Looking for sponsors | * Looking for sponsors | ||
* Collaborating with Purdue iGEM team | * Collaborating with Purdue iGEM team | ||
| + | |||
''Wetlab'' | ''Wetlab'' | ||
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* DNA retention from cultures | * DNA retention from cultures | ||
* Nano-drop tests | * Nano-drop tests | ||
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''Drylab'' | ''Drylab'' | ||
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* Looking for sponsors | * Looking for sponsors | ||
| + | ''Wetlab'' | ||
* Creating agar plates | * Creating agar plates | ||
* Transforming DNA | * Transforming DNA | ||
Revision as of 15:46, 6 August 2013
In this section you can find a small description of all the work we have done so far organized by the category it belongs to.
Feb-Apr
- Background research
- Selection of topic
- Further research
- Selection of project
- Further research
May
General Activities
- Regular team meeting
- Looking for sponsors
- Month planning
Wetlab
- Researching about the promoters
- Researching about the possible proteins for CEST imaging
Drylab
- Defining what needs to be modeled and what type of model is the most appropriate for it
General Activities
- Regular team meeting
- Looking for sponsors
Wetlab
- Researching and defining the killing mechanism
Drylab
- Starting the Molecular Dynamics model for the proteins selection.
General Activities
- Regular team meeting
- Looking for sponsors
Wetlab
- Defining the needed materials
- Defining the needed equipment
Drylab
- Continuing the Molecular Dynamics model for the proteins selection.
General Activities
- Regular team meeting
- Looking for sponsors
Wetlab
- Locating, booking and learning how to use the necessary equipment
Drylab
- Analyzing the results from the Molecular Dynamics model for the proteins selection and identifying the most useful proteins for CEST imaging
- Researching and defining the needed parameters for the analysis of the decoy sites through a stochastic simulations model
General Activities
- Regular team meeting
- Looking for sponsors
Wetlab
- Locating, booking and learning how to use the necessary equipment
Drylab
- Starting the stochastic simulations for the analysis of the decoy sites
June
General Activities
- Regular team meeting
- Looking for sponsors
- Collaborating with Purdue iGEM team
- Planning month activities
Wetlab
- General construct design
Drylab
- Continuing the stochastic simulations for the analysis of the decoy sites
General Activities
- Regular team meeting
- Looking for sponsors
Wetlab
- Protein design
Drylab
- Continuing the stochastic simulations for the analysis of the decoy sites
General Activities
- Regular team meeting
- Looking for sponsors
Wetlab
- Final design of the constructs
Drylab
- Continuing the stochastic simulations for the analysis of the decoy sites
General Activities
- Regular team meeting
- Looking for sponsors
Wetlab
- Ordering the constructs
- Working on the protocols
Drylab
- Analyzing the results from the stochastic simulations for the analysis of the decoy sites
July
General Activities
- Regular team meeting
- Looking for sponsors
- Planning month activities
Wetlab
- Finalizing the protocols
- Planning lab schedule
Drylab
- Starting the ODE model for the analysis of the FNR promoter
General Activities
- Regular team meeting
- Looking for sponsors
- Collaborating with Purdue iGEM team
Drylab
- Continuing the ODE model for the analysis of the FNR promoter
General Activities
- Regular team meetings
- Looking for sponsors
- Collaborating with Purdue iGEM team
Wetlab
- Creating agar plates
- Transforming DNA
- Plating bacteria
- Making LB medium
- Creating small cultures
- DNA retention from cultures
- Nano-drop tests
Drylab
- Analyzing the results from the ODE model for the analysis of the FNR promoter
General Activities
- Regular team meetings
- Looking for sponsors
Wetlab
- Creating agar plates
- Transforming DNA
- Plating bacteria
- Making LB medium
- Creating small cultures
- DNA retention from cultures
- Nano-drop tests
Drylab
- Merging the stochastic simulations model for the decoy sites with the ODE model for the FNR promoter
August
- ...
- ...
- ...
- ...
- ...
September
- ...
- ...
- ...
- ...
