Team:XMU Software

From 2013.igem.org

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<div class="home_s4t1">We have designed <span class="home_s4t2">2</span> software tools</div></br></br>
<div class="home_s4t1">We have designed <span class="home_s4t2">2</span> software tools</div></br></br>
<div class="home_s4t3">Brick Worker</div>
<div class="home_s4t3">Brick Worker</div>
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<div class="home_s4t4">A software suit for the evaluation and optimization of biobricks, i.e., promoter, RBS, protein coding sequence and terminator.</div></br></br>
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<div class="home_s4t4">Brick Woker is designed to analyze and predict the strength of various biobricks, i.e. promoters, RBS, protein coding sequence and terminators. It uses Position Weight Matrix method to recognize the key determinants of promoter and RBS sequences, predict their strengths and optimizes the protein coding sequences by  codon usage bias.Brick Worker is the first software to give an all-round and reliable evaluation of all biobricks, especially ,promoters, and represents a major step towards computational prediction and regulation of gene expression.</div></br></br>
<div class="home_s4t3">E' NOTE</div>
<div class="home_s4t3">E' NOTE</div>
<div class="home_s4t4">It is a web application serveing as assistant for experiments. It's useful function such as experiments recording and experimental template customization make experimental process easier and more enjoyable.</div>
<div class="home_s4t4">It is a web application serveing as assistant for experiments. It's useful function such as experiments recording and experimental template customization make experimental process easier and more enjoyable.</div>

Revision as of 14:05, 22 October 2013

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XMU-SOFTWARE
Xiamen University
We have designed 2 software tools


Brick Worker
Brick Woker is designed to analyze and predict the strength of various biobricks, i.e. promoters, RBS, protein coding sequence and terminators. It uses Position Weight Matrix method to recognize the key determinants of promoter and RBS sequences, predict their strengths and optimizes the protein coding sequences by codon usage bias.Brick Worker is the first software to give an all-round and reliable evaluation of all biobricks, especially ,promoters, and represents a major step towards computational prediction and regulation of gene expression.


E' NOTE
It is a web application serveing as assistant for experiments. It's useful function such as experiments recording and experimental template customization make experimental process easier and more enjoyable.