CLUSTAL O(1.2.0) multiple sequence alignment


Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      CTTTCCTCGAACACCGTGCGCAGTCCGCCGTGGCGCTCCAGCAGCACGCCGAACGCCTGC
Sequencing_Result_pHM04_DN07_colony_05_old                   ------------------------------------------------------------
                                                                                                                         

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      CGCAAGGCCGCCAGATCCAGCTCGCCATGCATCCACGAGGCCTGGGCGATGTGGTAGGCC
Sequencing_Result_pHM04_DN07_colony_05_old                   ------------AGATCCAGCTCGCCATGCATCCACGAGGCCTGGGCGATGTGGTAGGCC
                                                                         ************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      GAGCTTTGCGGGTCCAGCTTCCACAGGAACCACTGGCGCAACTGCGCATGGGACAGGGCT
Sequencing_Result_pHM04_DN07_colony_05_old                   GAGCTTTGCGGGTCCAGCTTCCACAGGAACCACTGGCGCAACTGCGCATGGGACAGGGCT
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      TCGGTCTGGTCGGACGAGGGTGCGCGGACCGGGATGGGGAAGTGCGAGAGATCCAGTCCC
Sequencing_Result_pHM04_DN07_colony_05_old                   TCGGTCTGGTCGGACGAGGGTGCGCGGACCGGGATGGGGAAGTGCGAGAGATCCAGTCCC
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      TCGGCCCGGATCTTTTGCAATGCCAGCGTGCGCTGGGCAGGGGTCAGGCTTGCAAAGCGC
Sequencing_Result_pHM04_DN07_colony_05_old                   TCGGCCCGGATCTTTTGCAATGCCAGCGTGCGCTGGGCAGGGGTCAGGCTTGCAAAGCGC
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      TCGGCGATTTGGCGCAGGCGGCCACGGTCCATCTAGTATTTCTCCTCTTTCTCTAGTATG
Sequencing_Result_pHM04_DN07_colony_05_old                   TCGGTGATTTGGCGCAGGCGGCCACGGTCCATCTAGTATTTCTCCTCTTTCTCTAGTATG
                                                             **** *******************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      TGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTA
Sequencing_Result_pHM04_DN07_colony_05_old                   TGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTA
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      AAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCG
Sequencing_Result_pHM04_DN07_colony_05_old                   AAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCG
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      CTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGA
Sequencing_Result_pHM04_DN07_colony_05_old                   CTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGA
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      GAGGCGGTTTGCGTATTGCTCTAGAAGCGGCCGCGAATTCTTGAAGACGAAAGGGCCTCG
Sequencing_Result_pHM04_DN07_colony_05_old                   GAGGCGGTTTGCGTATTGCTCTAGAAGCGGCCGCGAATTCTTGAAGACGAAAGGGCCTCG
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      TGATACGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTG
Sequencing_Result_pHM04_DN07_colony_05_old                   TGATACGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTG
                                                             ************************************************************

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      GCA---------------------------------------------------------
Sequencing_Result_pHM04_DN07_colony_05_old                   GCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAA
                                                             ***                                                         

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      ------------------------------------------------------------
Sequencing_Result_pHM04_DN07_colony_05_old                   ATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTTCAATAATATTTGAAAAAG
                                                                                                                         

Reference_Sequence_pHM04_construct_VF2_to_DN_07_reverse      -----
Sequencing_Result_pHM04_DN07_colony_05_old                   GAAGA