Template:Kyoto/Notebook/Aug 28

From 2013.igem.org

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===Electrophoresis===
===Electrophoresis===
 +
<div class="experiment">
 +
<span class="author">No name</span>
 +
{| class="wikitable"
 +
!Lane||Sample||Enzyme1||Enzyme2
 +
|-
 +
|1||8/22 RBS-lysis1-(1)||EcoRI||SpeI
 +
|-
 +
|2||8/22 RBS-lysis1-(1)||--||--
 +
|-
 +
|3||8/17 RBS-GFP-DT-(2)||XbaI||PstI
 +
|-
 +
|4||8/17 RBS-GFP-DT-(2)||--||--
 +
|-
 +
|5||8/20 Pcon-RBS-GFP-DT-(1)||EcoRI||XbaI
 +
|-
 +
|6||8/20 Pcon-RBS-GFP-DT-(1)||--||--
 +
|-
 +
|7||100bp ladder||--||--
 +
|-
 +
|8||8/20 Pcon-RBS-luxR-DT-(1)||EcoRI||XbaI
 +
|-
 +
|9||8/20 Pcon-RBS-luxR-DT-(1)||--||--
 +
|-
 +
|10||8/28 Plux||SpeI||PstI
 +
|-
 +
|11||8/28 Plux||--||--
 +
|-
 +
|12||8/20 RBS-tetR-DT||XbaI||PstI
 +
|-
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|13||8/20 RBS-tetR-DT||--||--
 +
|}
 +
[[File:igku_Aug28electrophoresis1]]<br>
 +
</div>
 +
===Gel Extraction===
===Gel Extraction===
===Colony PCR===
===Colony PCR===

Revision as of 07:33, 21 September 2013

Contents

Aug 28

Electrophoresis

No name

LaneSample
1100bp
2SasA
3RpaA
4RpaB
5PkaiBC
6PCR NC
7100bp

File:Igku xxxxxx.xxx

Miniprep

No name

DNAconcentration[µg/mL]260/280260/230
8/27 Plux173.81.951.45

Ligation

No name

stateVectorInserter
experiment8/71 DT-13.08.0
  • Samples were evaporeted used evaporator into about 3 µL.
sampleMilliQLigation Hightotal
343.510.5
  • incubate one hour at 16 °C

Gel Extraction

No name

LaneDNA
1100bpladder--
3SasA(8/27 Genome PCR production)
5RpaA(8/27 Genome PCR production)
7RpaB(8/27 Genome PCR production)
9PkaiBC(8/27 Genome PCR production)

File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx

Colony PCR

No name

Samplebase pair
8/21 RBS-lysis2-(3)772
8/21 RBS-lysis2-(4)772
8/21 RBS-lysis2-(5)772
8/21 RBS-lysis2-(6)772
PreDenatureDenatureAnnealingExtensioncycle
94°C94°C55°C68°C--
5min30s30s48s30cycles

File:Igku Aug19electrophoresis1.png

Restriction Enzyme Digestion

No name

8/22 RBS-lysis1-(1)EcoRISpeIBufferBBSAMilliQtotal
2 cuts9µL0.5µL0.5µL3µL0.3µL16.7µL30µL
NC1µL0µL0µL1µL0.1µL7.9µL10µL
8/17 RBS-GFP-DT-(2)XbaIPstIBufferDBSAMilliQtotal
2 cuts4µL0.5µL0.5µL3µL0.3µL21.7µL30µL
NC0.5µL0µL0µL1µL0.1µL8.4µL10µL
8/20 Pcon-RBS-GFP-DT-(1)EcoRISpeIBufferBBSAMilliQtotal
2 cuts3µL0.5µL0.5µL3µL0.3µL22.7µL30µL
NC0.3µL0µL0µL1µL0.1µL8.6µL10µL
8/20 Pcon-RBS-luxR-DT-(1)EcoRIXbaIBufferDBSAMilliQtotal
2 cuts2µL0.5µL0.5µL3µL0.3µL23.7µL30µL
NC0.3µL0µL0µL1µL0.1µL8.6µL10µL

No name

8/28 PluxSpeIPstIBufferDBSAMilliQtotal
2 cuts6µL0.5µL0.5µL3µL0.3µL19.7µL30µL
NC1µL0µL0µL1µL0.1µL7.9µL10µL
8/20 RBS-tetR-DT-(1)XbaIPstIBufferDBSAMilliQtotal
2 cuts5µL0.5µL0.5µL3µL0.3µL20.7µL30µL
NC0.5µL0µL0µL1µL0.1µL8.4µL10µL

Electrophoresis

No name

LaneSampleEnzyme1Enzyme2
18/22 RBS-lysis1-(1)EcoRISpeI
28/22 RBS-lysis1-(1)----
38/17 RBS-GFP-DT-(2)XbaIPstI
48/17 RBS-GFP-DT-(2)----
58/20 Pcon-RBS-GFP-DT-(1)EcoRIXbaI
68/20 Pcon-RBS-GFP-DT-(1)----
7100bp ladder----
88/20 Pcon-RBS-luxR-DT-(1)EcoRIXbaI
98/20 Pcon-RBS-luxR-DT-(1)----
108/28 PluxSpeIPstI
118/28 Plux----
128/20 RBS-tetR-DTXbaIPstI
138/20 RBS-tetR-DT----

File:Igku Aug28electrophoresis1

Gel Extraction

Colony PCR

Liquid Culture

Ligation

===Liquid Culture===
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