Template:Kyoto/Notebook/Sep 16
From 2013.igem.org
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!DNA||concentration[µg/mL]||260/280||260/230 | !DNA||concentration[µg/mL]||260/280||260/230 | ||
|- | |- | ||
- | | | + | |Dx-lux1||136.7||1.46||1.28 |
+ | |- | ||
+ | |RBS-laczα-DT||237.6||1.88||1.70 | ||
+ | |- | ||
+ | |pSB4K5||148.4||1.55||1.09 | ||
+ | |- | ||
+ | |Pcon-KBS-tetR-DT||126.6||1.73||1.36 | ||
+ | |- | ||
+ | |9/11Plac1||160.0||1.78||1.28 | ||
+ | |- | ||
+ | |9/15Plac2||144.0||1.73||1.81 | ||
+ | |- | ||
+ | |9/14Plac332.5||1.51||2.33 | ||
+ | |- | ||
+ | |Ptet-RBS-laczα-DT||231.3||1.84||1.57 | ||
+ | |- | ||
|} | |} | ||
+ | |||
===PCR=== | ===PCR=== | ||
<!-- ここから --> | <!-- ここから --> |
Revision as of 06:16, 24 September 2013
Contents |
Sep 16
Liquid Culture
Sample | medium |
---|---|
pSB1C3+P-KaiBC① | Plusgrow medium(+CP) |
pSB1C3+P-KaiBC② | Plusgrow medium(+CP) |
Colony PCR
Sample | base pair |
---|---|
pSB1C3+P-KaiBC① | 283 |
pSB1C3+P-KaiBC② | 283 |
PreDenature | Denature | Annealing | Extension | cycle |
---|---|---|---|---|
94°C | 94°C | 55°C | 68°C | -- |
2min | 30s | 30s | 18s | 30cycles |
Gel Extraction
Lane | DNA | Enzyme |
---|---|---|
1 | 1kb ladder | |
2 | pT181 attenuator | X+P |
3 | pT181 attenuator | X+P |
4 | pT181 attenuator | X+P |
6 | pSB1C3 | E+S |
7 | pSB1C3 | E+S |
8 | pSB1C3 | E+S |
10 | pSB4K5 | X+P |
11 | pSB4K5 | X+P |
12 | pSB4K5 | X+P |
File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx
Name | concentration[µg/mL] | 260/280 | 260/230 |
---|---|---|---|
pT181 attenuator(X+P) | 8.2 | 1.62 | 0.11 |
pSB1C3(E+S) | 49.5 | 1.48 | 0.18 |
pSB4K5(X+P) | 18.1 | 1.73 | 0.57 |
DT(S+P) | 70.4 | 1.36 | 1.02 |
aptamer12-1R-DT(S+P) | 42.0 | 1.82 | 0.47 |
spinach-DT(S+P) | 36.8 | 1.79 | 0.61 |
Miniprep
DNA | concentration[µg/mL] | 260/280 | 260/230 |
---|---|---|---|
Dx-lux1 | 136.7 | 1.46 | 1.28 |
RBS-laczα-DT | 237.6 | 1.88 | 1.70 |
pSB4K5 | 148.4 | 1.55 | 1.09 |
Pcon-KBS-tetR-DT | 126.6 | 1.73 | 1.36 |
9/11Plac1 | 160.0 | 1.78 | 1.28 |
9/15Plac2 | 144.0 | 1.73 | 1.81 |
9/14Plac332.5 | 1.51 | 2.33 | |
Ptet-RBS-laczα-DT | 231.3 | 1.84 | 1.57 |
PCR
genome DNA | KOD plus | 10x buffer | dNTP | MgSO4 | SasA_fwd primer | SasA_rev primer | MilliQ | total |
---|---|---|---|---|---|---|---|---|
0.5 | 2.5 | 2.5 | 1.5 | 0.75 | 0.75 | 25 |
PreDenature | Denature | Annealing | Extension | cycle |
---|---|---|---|---|
°C | °C | °C | °C | -- |
(◎Д◎) |
Electrophoresis
Lane | Sample | Enzyme1 | Enzyme2 |
---|---|---|---|
(°Д°) |
Restriction Enzyme Digestion
DNA | restricion enzyme | restriction enzyme | Buffer | BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | (°°) µL | µL | µL | µL | µL | µL | µL |
NC | µL | µL | µL | µL | µL | µL | µL |
Ligation
state | Vector | Inserter | Ligation High ver.2 | ||
---|---|---|---|---|---|
experiment | name | xx µg/mL | name | xx µg/mL | xx µg/mL |
NC | name | xx µg/mL | name | xx µg/mL | xx µg/mL |
PCR
genome DNA | KOD plus | 10x buffer | dNTP | MgSO4 | SasA_fwd primer | SasA_rev primer | MilliQ | total |
---|---|---|---|---|---|---|---|---|
0.5 | 2.5 | 2.5 | 1.5 | 0.75 | 0.75 | 25 |
PreDenature | Denature | Annealing | Extension | cycle |
---|---|---|---|---|
°C | °C | °C | °C | -- |
(◎Д◎) |