Template:Kyoto/Notebook/Sep 7

(Difference between revisions)

Revision as of 12:47, 25 September 2013

No name

DNA	concentration[µg/mL]	260/280	260/230
RBS-lysis1-DT	195.3
RBS-lysis3-DT	255.5	1.91	2.04
Ptet-pT18	183.6	1.85	1.48
Pcon-RBS-tetR-DT	134.3	1.94	2.20
Ptet-RBS-lacZα-DT	67.7	1.92	1.79
Pcon-pT181 attenuator	232.3	1.95	1.90
pSB4K5	237.0	1.61	1.50
pT181 antisense(pSB1C3)	256.4	1.63	1.78
apt12_1R(pSB1C3)	230.0	1.98	2.28

No name

Lane	Sample
1	100bp ladder
2	Plac-pT181 antisense

No Name

state	Vector		Inserter		Ligation High ver.2
experiment	9/6 Plux (SpeI&PstI)	2 µL	9/7 RBS-lysis2-DT (EcoRI&XbaI)	µL	3.5 µL
experiment	9/6 Plac (SpeI&PstI)	µL	9/7 RBS-lysis2-DT (EcoRI&XbaI)	µL	3.5 µL
experiment	9/6 Pcon-RBS-luxR-DT (EcoRI&XbaI)	1.9 µL	9/6 Plux-RBS-GFP-DT(SpeI&PstI)	2.2 µL	3.5 µL
experiment	9/6 Pbed/araC (SpeI&PstI)	1.6 µL	9/5 RBS-luxI-DT (EcoRI&XbaI)	16 µL	3.5 µL
experiment	9/6 Plac (SpeI&PstI)	1.5 µL	9/5 pT181 antisense (EcoRI&XbaI)	2.0 µL	3.5 µL
experiment	9/6 Pcon (SpeI&PstI)	3.0 µL	9/5 RBS-luxI-DT (EcoRI&XbaI)	10 µL	3.5 µL

No name

Sample	base pair
9/5 Plac-spinarch-DT-13~20
9/5 Plac-pT181 attenuator-13~20

PreDenature	Denature	Annealing	Extension	cycle
94　°C	94　°C	55　°C	60　°C	--
5min	30s	30s	42s	30cycle

Tatsui

Name	Sample	Competent Cells	Total
Pcon-RBS-luxR-DT+Plux-RBS-GFP-DT	2µL	20µL	22µL
Pbed/araC+RBS-luxI-DT	2µL	20µL	22µL
Plac+pT181 antisence	2µL	20µL	22µL
Pcon+RBS-luxI-DT	2µL	20µL	22µL

No Name

	DNA	XbaI	PstI	Buffer	BSA	MilliQ	total
9/7 RBS-lysis1-DT(XbaI & PstI)	10 µL	1 µL	1 µL	3 µL	3 µL	12 µL	30 µL
NC	0.5 µL	0 µL	0 µL	1 µL	1 µL	7.5 µL	10 µL

	DNA	XbaI	PstI	Buffer	BSA	MilliQ	total
9/7 RBS-lysis3-DT (XbaI & PstI)	7.8 µL	1 µL	1 µL	3 µL	3 µL	14.2 µL	30 µL
NC	0.4 µL	0 µL	0 µL	1 µL	1 µL	7.6 µL	10 µL

	DNA	SpeI	PstI	Buffer	BSA	MilliQ	total
9/5 Plac (SpeI & PstI)	6.0 µL	1 µL	1 µL	3 µL	3 µL	16.0 µL	30 µL
NC	0.3 µL	0 µL	0 µL	1 µL	1 µL	7.7 µL	10 µL

	DNA	EcorI	SpeI	Buffer	BSA	MilliQ	total
9/7 pSB4K5 (EcoRI & SpeI)	8.4 µL	1 µL	1 µL	3 µL	3 µL	16.0 µL	30 µL
NC	0.4 µL	0 µL	0 µL	1 µL	1 µL	7.7 µL	10 µL

	DNA	restricion enzyme	restriction enzyme	Buffer	BSA	MilliQ	total
Pcon-pT181 attenuator (SpeI & PstI)	8.6 µL	1 µL	1 µL	3 µL	3 µL	13.4 µL	30 µL
Pcon-pT181 attenuator (EcorI & SpeI)	8.6 µL	1 µL	1 µL	3 µL	3 µL	13.4 µL	30 µL
NC	0.4 µL	0 µL	0 µL	1 µL	1 µL	7.6 µL	10 µL

	DNA	XbaI	PstI	Buffer	BSA	MilliQ	total
9/5 Spin-DT (XbaI & PstI)	5.4 µL	1 µL	1 µL	3 µL	3 µL	16.6 µL	30 µL
NC	0.3 µL	0 µL	0 µL	1 µL	1 µL	7.7 µL	10 µL

	DNA	SpeI	PstI	Buffer	BSA	MilliQ	total
Ptet-anticodone (SpeI & PstI)	11 µL	1 µL	1 µL	3 µL	3 µL	11 µL	30 µL
NC	0.5 µL	0 µL	0 µL	1 µL	1 µL	7.5 µL	10 µL

	DNA	XbaI	PstI	Buffer	BSA	MilliQ	total
9/6 RBS-lacZα-DT (XbaI & PstI)	11 µL	1 µL	1 µL	3 µL	3 µL	11 µL	30 µL
NC	0.5 µL	0 µL	0 µL	1 µL	1 µL	7.5 µL	10 µL

	DNA	EcoRI	SpeI	Buffer	BSA	MilliQ	total
pSB1C3 (1) (EcoRI & SpeI)	6.6 µL	1 µL	1 µL	3 µL	3 µL	15.4 µL	30 µL
NC	0.3 µL	0 µL	0 µL	1 µL	1 µL	7.7 µL	10 µL

	DNA	XbaI	PstI	Buffer	BSA	MilliQ	total
pSB1C3 (3) (XbaI & PstI)	6.6 µL	1 µL	1 µL	3 µL	3 µL	15.4 µL	30 µL
NC	0.3 µL	0 µL	0 µL	1 µL	1 µL	7.7 µL	10 µL

@@ Line 29: / Line 29: @@
 </div>
 ===Electrophoresis===
+<div class="experiment">
+<span class="author">No name</span>
+{| class="wikitable"
+!Lane||Sample
+|-
+|1||100bp ladder
+|-
+|2||Plac-Spinach-DT -5
+|-
+|3||Plac-Spinach-DT -6
+|-
+|4||Plac-Spinach-DT -7
+|-
+|5||Plac-Spinach-DT -8
+|-
+|6||Plac-Spinach-DT -9
+|-
+|7||Plac-Spinach-DT -10
+|-
+|8||100bp ladder
+|-
+|1||100bp ladder
+|-
+|2||Plac-Spinach-DT -11
+|-
+|3||Plac-Spinach-DT -12
+|-
+|4||Pcon-antisense -5
+|-
+|5||Pcon-antisense -6
+|-
+|6||Pcon-antisense -7
+|-
+|7||Pcon-antisense -8
+|-
+|8||100bp ladder
+|}
+[[File:igku_xxxxxx.xxx]]<br>
+{| class="wikitable"
+!Lane||Sample
+|-
+|1||100bp ladder
+|-
+|2||Pcon-antisense -9
+|-
+|3||Pcon-antisense -10
+|-
+|4||Pcon-antisense -11
+|-
+|5||Pcon-antisense -12
+|-
+|6||Plac-attenuator -5
+|-
+|7||Plac-attenuator -6
+|-
+|8||100bp ladder
+|-
+|1||100bp ladder
+|-
+|2||Plac-attenuator -7
+|-
+|3||Plac-attenuator -8
+|-
+|4||Plac-attenuator -9
+|-
+|5||Plac-attenuator -10
+|-
+|6||Plac-attenuator -11
+|-
+|7||Plac-attenuator -12
+|-
+|8||100bp ladder
+|}
+[[File:igku_xxxxxx.xxx]]<br>
+{| class="wikitable"
+!Lane||Sample
+|-
+|1||100bp ladder
+|-
+|2||Plac-pT181 antisense
+|}
+[[File:igku_xxxxxx.xxx]]<br>
+</div>
 ===Ligation===
 <div class="experiment">