Team:XMU Software/result1

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Revision as of 16:22, 26 September 2013

<!DOCTYPE HTML> Result1

The result of sigma factors recognition

Among the sequences given bellow, number 1-50 are sigma 70 promoters, number 51-60 are sigma 28 promoters, 61-70 are sigma 24 promoters, number 71-80 are sigma 54 promoters, number 81-90 are sigma 38 promoters, number 91-100 are sigma 32 promoters.

number promoter sequence actual type predicted type
1 acgggaaacagactcatgttgaccttggttgtaaagagagagcaggcgttattattttcaGcatctgtcgccgcagagaagsigma70 sigma70
2 gcgagagcaacattgctgtagattgatatttaatatattagcgtaactgttatgctgttaTctatattatgtgatctaaatsigma70 sigma70
3 gggcatggaaagccgggcgagagcaacattgctgtagattgatatttaatatattagcgtAactgttatgctgttatctatsigma70 sigma70
4 gggaaacagactcatgttgaccttggttgtaaagagagagcaggcgttattattttcagcAtctgtcgccgcagagaagggsigma70 sigma70
5 tgcttgccagacaggggcgttattaccagttcaagcagggtttgtaagctattattgaacGatccgacttgcgtggagtttsigma70 sigma38
6 gcccgggaaaaatatgctcgcgggcttgctatctcgctgacggacaggcaaattgatgacCagcttttaaaccgactccgtsigma70 sigma70
7 tgaaggttatttacatgttagctgttgattatcttccctgataagaccagtatttagctgCcaattgctacgaaatcgttasigma70 sigma70
8 actccgcggttcgaccacttttttatccaaagtttcgggctgttatgttttaatgtgcaaCattcatggtctgttgggggcsigma70 sigma70
9 tatttttaattaaaatggaaattgtttttgattttgcattttaaatgagtagtcttagttGtgctgaacgaaaagagcacasigma70 sigma70
10 tcttttatcaatttgggttgttatcaaatcgttacgcgatgtttgtgttatctttaatatTcaccctgaagagaatcagggsigma70 sigma70
11 tttatgttgcttttttgtaaacagattaacacctcgtcaaaatcctgctattctgcccgtTgcggtactgggcatttacccsigma70 sigma70
12 aatcgtggtaagacctgccgggatttagttgcaaatttttcaacattttatacactacgaAaaccatcgcgaaagcgagttsigma70 sigma70
13 gttcgtgaatttacaggcgttagatttacatacatttgtgaatgtatgtaccatagcacgAcgataatataaacgcagcaasigma70 sigma70
14 aaagtcagttaatgtaatgcctcctactgaccaaagaatacttgcacttaaggttcagtaTaaaagggcatgataatttacsigma70 sigma70
15 ttacgaggttttaattctgcctctttcaacccgcgtcaaaataaaacagtagaatattaaTctttttttgtgtttatgtgcsigma70 sigma70
16 gatttcaaattggtcaatggtcaaaagttaataaacccattgctgcgtttatattatcgtCgtgctatggtacatacattcsigma70 sigma70
17 cgcaaagctgaccgcacaaaaggggagtgcttttctgtgcttagcggttagaatagtctcAtgactatatctggagttgacsigma70 sigma70
18 aataaccacactgtgaatgttgtctttaatcaattgtaagtgcatgtaaaataccactttAgagttagtcagtatcttcctsigma70 sigma70
19 aacgtaaaaaatcgttgcgcaatcgtggatttttaccctgctttgtttttataatggtgcGcacttttatatccagaaaaasigma70 sigma70
20 ttcagtgataattatcacatttcaattgcacattaatggatattctttaataatctcgcgAcgtttctttatgataaataasigma70 sigma70
21 catttaaattatttaatcatgtttattgcatataaattcacttgatggcattgttatcccAtgccgcagacacggccaaaa sigma70 sigma70
22 ttttaacttttaaagcagaaatattgcataattattctgtcaaaggtactatcttcgaccTcaatagctatcagactgccasigma70 sigma70
23 ataaaaaatgaacaattcactctcttgcttatttagtgacaactattcatgattttgtgaAaccggtttcttaattccgtt sigma70 sigma24
24 aatatttttcccgccgattgtgcaaggacaatcggcaaacggtgcagtacactgcgttgaTtgcgtgtaaagggatgaaaasigma70 sigma70
25 gagttaggctttttattgaatgattattgcatgtgtgtcggtttttgttgcttaatcataAgcaacaggacgcaggagtatsigma70 sigma70
26 tcattcaataaaaagcctaactcacttttgattcattaaaaaagaaggctaaaatagaatGaatcatcaatccgcataagasigma70 sigma70
27 aatgacttatgaaatttagtgttgacagacaaggtaccgctaagtaatattcgccccgttCacacgattcctctgtagttcsigma70 sigma70
28 ttggggaatttaaaaatcgggtttgacaaaagatttttcgccgttaagatgtgcctcaacAacgattcctctgtagttcagsigma70 sigma70
29 caaaaaaatgcatttcaccctttgacatcaccatgcactgccattaatatgcgccccgttCacacgattcctctgtagttcsigma70 sigma70
30 accgacacttaaagtgatccagattacggtagaaatcctcaagcagcatatgatctcgggTattcggtcgatgcaggggatsigma70 sigma70
31 ttcaaaagatgagaaaaaccgttgacgaaggtcgaggcaatccgtaatattcgcctcgttCccaacggaacacaacgcggasigma70 sigma70
32 ggctggcacgaaccctgcaatctacatttacagcgcaaacattacttattattaacatatAaataacgaattatttactgtsigma70 sigma70
33 ctccctgaaagacaccatccgtggctttaaaggcatcatggaaggcgaatacgatcacctGccggagcaggcgttctacat sigma70 sigma70
34 ttattcaccttttggctacttattgtttgaaatcacgggggcgcaccgtataatttgaccGctttttgatgcttgactctasigma70 sigma70
35 gaacataggcttcgatttattgcgctatctctgtggcaggattgtgaataaagtgtcaacAagcaacggggcatcgcccatsigma70 sigma70
36 tttatgtgatttgtatcacataaagattgatttttgtgatggttgtcatattataagcgcAaagacaataacacctgtata sigma70 sigma70
37 gaacataggcttcgatttattgcgctatctctgtggcaggattgtgaataaagtgtcaacAagcaacggggcatcgcccat sigma70 sigma70
38 tttatgtgatttgtatcacataaagattgatttttgtgatggttgtcatattataagcgcAaagacaataacacctgtata sigma70 sigma70
39 ccgtcaggtatggatgggcggtgaagagttgattctgacgcccaaagaatatgctctgctGtcacggttaatgctcaaagc sigma70 sigma70
40 ttggggtgctcttgacagctatttttgatatgatttgagattcaactctcaaatttgtgaAaaatataaggtgttggaatgsigma70 sigma38
41 tttggactattccttggggtgctcttgacagctatttttgatatgatttgagattcaactCtcaaatttgtgaaaaatatasigma70 sigma38
42 attgagcaagcgttcaaagccctatgtacagaactcaatgcacaaggcagtattaacgtcGtcaattattcccaacatgatsigma70 sigma70
43 agggcatattccgtgtgctgacttctctggtttcctgggttgtatcgtttattccgcgccGcccggagcggagcgaaacggsigma70 sigma70
44 aaaatcacacgtcttgtgaccttctaaattgattcacatgctaaatctgataagttttaaTttcaatggtaggtttatttcsigma70 sigma24
45 tacggcgagacgggaatttgctcactttttgactttccgttacgcaacagaaaaagttaaAaacgaaaagactaaaatcacsigma70 sigma70
46 ttacaaaacctgttgacagaaagttaaaacagttttgtaatgcatgttacataataaatcAaggagtccttatgggcgcttsigma70 sigma70
47 acctgtaaaagcgcccataaggactccttgatttattatgtaacatgcattacaaaactgTtttaactttctgtcaacaggsigma70 sigma70
48 tacacccaggtgaagtccatccaggttgagatggctaaattccagtccatattctaaccaGgaggtttatttgcaatttgasigma70 sigma70
49 cgtaacaattaagacacattttatattgaacgtccaatcaataaccgctttaatagataaAcaccgctgatgaatggagtgsigma70 sigma70
50 tttatctattaaagcggttattgattggacgttcaatataaaatgtgtcttaattgttacGaatttgattttaaatagtaasigma70 sigma70
51 cctctgccgaagccctgcaacaggccattgacgataatttctggcaagccgaataccgcgActaccgccgtacctccatctsigma28 sigma38
52 aattgcgatctaaatcaaattaatcggttaaagataaccgcagcggggccgacataaactCtgacaagaagttaacaaccasigma28 sigma28
53 cttgccggaaggcgaggtctatgcataaaaagcagcggctgacgtcttccgacgttggccGtttttttatgtgtaaggaacsigma28 sigma70
54 accaaaaactatcgtgccagctacaacgttgaaggtgcgttccaggcctccaacaaaaatAtcgccgatgcggttaacagtsigma28 sigma70
55 gtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtGtggggtctccccatgcgagasigma28 sigma70
56 ctggcgattgcggcgctgaaagagatctaccgcaccaccagcgaaatgccggtagaagaaGcgtatcgctatattcgcagcsigma28 sigma70
57 catcggttctgcattcggaagatgccattgaagggccgctggcgtttgccgagaagcgcgAtccggtgtggaaaggacgttsigma28 sigma28
58 gataaagtaatggggctgattcacaccattaaaggcttcgagattgctgccagtaacgccGcacttagcggagaatttaacsigma28 sigma70
59 ccgacgtcattatctctaaccgaatggcagaagagcttaaggatgtggcagataaggtatAcacccgcgatctctttggcasigma28 sigma24
60 taagctcttgtcagcggcagggcgttctgccgataaccgtaaccgaagatgataactgacAatgggtaaaacgaacgactgsigma28 sigma70
61 caaccagcaagagaacatctggcctgcgggcaccactgctacagtggtggtcactggcaaAcaagatcgcgacgaaagccasigma24 sigma24
62 agcaagagaacatctggcctgcgggcaccactgctacagtggtggtcactggcaaacaagAtcgcgacgaaagccaggattsigma24 sigma24
63 ccgcgacctttgccgcaagcctcggtctgaaagttaacgccggacacggtctgacctatcAcaacgtgaaagccattgccgsigma24 sigma24
64 caagagctggcgcgtatcgccaaagccgcgacctttgccgcaagcctcggtctgaaagttAacgccggacacggtctgaccsigma24 sigma24
65 tagatgtccttgattaacaccaaaattaaaccttttaaaaaccaggcattcaaaaacggcGaattcatcgaaatcaccgaasigma24 sigma24
66 tattttatctacaaaaactgactaaataaaaatttttcactaattgattagtcatagccaGcgatatacgctatgcgaaaasigma24 sigma70
67 atttgcctgatttttcagcgattgaaactacacgttgcaatttgccgttgacacattcggGcggaattcatatgatgccgcsigma24 sigma70
68 cagggttatagcggcgaggcggcatgttaaaactccagatagctaacgaatcataaggtaGaaacatgctactctgaaccgsigma24 sigma24
69 aatatcgccgatgcggttaacagtgtgctgaccgataccatcgctgatatgtctcaggacAccagcatccacgaattcatcsigma24 sigma24
70 gtgcaatcattgaaaccccgctgggcaccatgcagggtcactacgaaatgatcgatgaaaAtggcgtccctttcagcatcgsigma24 sigma70
71 atttacattaactcctttttttctccacgattggctcgtaccttgccgctacagtgaagcAagtcaagcctacaacgatacsigma54 sigma70
72 gatctcctttgttctcaccggtatctacatctggcgggcgaacggcgaattcgaccgtctTaataatgaagtcctgcatgasigma54 sigma24
73 tatttaacgttgaatgttactgttgtcgtcaagatggcataagacctgcatgaaagagccTgcaaacacacaacacaatacsigma54 sigma70
74 aaaaagcagtatttcggcgagtagcgcagcttggtagcgcaactggtttgggaccagtggGtcggaggttcgaatcctctcsigma54 sigma24
75 tagcctccgccgtttatgcacttttatcactggctggcacgaaccctgcaatctacatttAcagcgcaaacattacttattsigma54 sigma38
76 attagttaaataactaaatccaataatctcattctggcactccccttgctattgcctgacTgtacccacaacggtgtatgcsigma54 sigma70
77 agttaaagctattcgtgcggtgttgccttgcaagtggtccgtggattgcatattgtcccgTtagtggtttcaaaatgagcasigma54 sigma70
78 tgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagaTagcaatgacgttaccgagtgsigma54 sigma38
79 acatcctatcacaggattgaaagtaggggaaaatggcagggttttctctttgtgcctcatCattaccataattaacggaatsigma54 sigma70
80 ttaagccagcattctggcgcttatcccggcatggcatgagatctgcataagcggaaagcgCagcaatttttgtcttatacasigma54 sigma24
81 tttgcaaaaatttgatttggatcacgtaatcagtacccagaagtgagtaatcttgcttacGccacctggaagtgacgcattsigma38 sigma70
82 tacgaaaatggctcacccgaaatatcatacttctgcctttagctccgtctctataatttgGgaaaattgtttctgaatgttsigma38 sigma70
83 gctgtcgtaaagctgttaccgactggcgaagatttcgccagtcacgtctacccttgttatAcctcacaccgcaaggagacgsigma38 sigma38
84 gaataatggtgataactatcatcgccaggatgaataaacattgttcatggcaacttatatGactttttcattaaagcaatcsigma38 sigma70
85 acccataaagaataatggtgataactatcatcgccaggatgaataaacattgttcatggcAacttatatgactttttcattsigma38 sigma70
86 gcacatcatcctgattatgattgtgtatttaattggttgttatttgactactatcaacttGttttaattttatgataggtgsigma38 sigma70
87 aatgctttgttttccgattaatttaacgaatgtcattcgtttttgccctacacaaaacgaCactaaagctggagagaaccasigma38 sigma54
88 ccgcccccgttattttgtgctatgtttattgaataatgcgctttgcttttaacttttaaaGcagaaatattgcataattatsigma38 sigma70
89 gacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaataatgcGctttgcttttaacttttaaasigma38 sigma70
90 tccgccgtttatgcacttttatcactggctggcacgaaccctgcaatctacatttacagcGcaaacattacttattattaasigma38 sigma38
91 gggcaccactgctacagtggtggtcactggcaaacaagatcgcgacgaaagccaggattcGttcttccgtaaaatggcccasigma32 sigma70
92 ggtgtcatcatgcgctacgctctatggctccctgacgtttttttagccacgtatcaattaTaggtacttccatgtcgagtasigma32 sigma38
93 acagtacgtcgtactttatttctgtctttaaagacttctacggtatgacgccgctgcattAtgttagtcagcacagagaacsigma32 sigma70
94 aagaatcagaacaattcactatataacattgcatgtaaagcatatacacctcattattttGtcattattaagttattaacasigma32 sigma70
95 ccgcagaaccgcttgccggtatgggttttgaaacctatgccattgccagcgccatcattgGcggcaccagtttcttcggcgsigma32 sigma70
96 gccggacaaccgttcattcctgaaatgctggataaacttgccgaactgaaggcatggcgtGaacgagaaggtctggagtacsigma32 sigma24
97 tgaccaaaaactatcgtgccagctacaacgttgaaggtgcgttccaggcctccaacaaaaAtatcgccgatgcggttaacasigma32 sigma70
98 gagcaggcagatgagcgtcaggcactgagccttgcgatgcctaaagtcagccaggctgttGcctgagtaaggagagtatgasigma32 sigma24
99 gggcagtagtctgcctgattaattttcttttaaatgatagatatagagtaccacatcgcgGctttctatgcgttgttcaatsigma32 sigma70
100 gagttacacccaggtgaagtccatccaggttgagatggctaaattccagtccatattctaAccaggaggtttatttgcaatsigma32 sigma70

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