"
Team:XMU Software/result1
From 2013.igem.org
(Difference between revisions)
m |
|||
| Line 198: | Line 198: | ||
position:absolute; | position:absolute; | ||
top:50px; | top:50px; | ||
| - | left: | + | left:150px; |
width:1000px; | width:1000px; | ||
overflow-y:auto; | overflow-y:auto; | ||
Revision as of 03:57, 28 September 2013
<!DOCTYPE HTML>
The result of sigma factors recognition
Among the sequences given bellow, number 1-50 are sigma 70 promoters, number 51-60 are sigma 28 promoters, 61-70 are sigma 24 promoters, number 71-80 are sigma 54 promoters, number 81-90 are sigma 38 promoters, number 91-100 are sigma 32 promoters.
| number | promoter sequence | actual type | predicted type |
|---|---|---|---|
| 1 | acgggaaacagactcatgttgaccttggttgtaaagagagagcaggcgttattattttcaGcatctgtcgccgcagagaag | sigma70 | sigma70 |
| 2 | gcgagagcaacattgctgtagattgatatttaatatattagcgtaactgttatgctgttaTctatattatgtgatctaaat | sigma70 | sigma70 |
| 3 | gggcatggaaagccgggcgagagcaacattgctgtagattgatatttaatatattagcgtAactgttatgctgttatctat | sigma70 | sigma70 |
| 4 | gggaaacagactcatgttgaccttggttgtaaagagagagcaggcgttattattttcagcAtctgtcgccgcagagaaggg | sigma70 | sigma70 |
| 5 | tgcttgccagacaggggcgttattaccagttcaagcagggtttgtaagctattattgaacGatccgacttgcgtggagttt | sigma70 | sigma38 |
| 6 | gcccgggaaaaatatgctcgcgggcttgctatctcgctgacggacaggcaaattgatgacCagcttttaaaccgactccgt | sigma70 | sigma70 |
| 7 | tgaaggttatttacatgttagctgttgattatcttccctgataagaccagtatttagctgCcaattgctacgaaatcgtta | sigma70 | sigma70 |
| 8 | actccgcggttcgaccacttttttatccaaagtttcgggctgttatgttttaatgtgcaaCattcatggtctgttgggggc | sigma70 | sigma70 |
| 9 | tatttttaattaaaatggaaattgtttttgattttgcattttaaatgagtagtcttagttGtgctgaacgaaaagagcaca | sigma70 | sigma70 |
| 10 | tcttttatcaatttgggttgttatcaaatcgttacgcgatgtttgtgttatctttaatatTcaccctgaagagaatcaggg | sigma70 | sigma70 |
| 11 | tttatgttgcttttttgtaaacagattaacacctcgtcaaaatcctgctattctgcccgtTgcggtactgggcatttaccc | sigma70 | sigma70 |
| 12 | aatcgtggtaagacctgccgggatttagttgcaaatttttcaacattttatacactacgaAaaccatcgcgaaagcgagtt | sigma70 | sigma70 |
| 13 | gttcgtgaatttacaggcgttagatttacatacatttgtgaatgtatgtaccatagcacgAcgataatataaacgcagcaa | sigma70 | sigma70 |
| 14 | aaagtcagttaatgtaatgcctcctactgaccaaagaatacttgcacttaaggttcagtaTaaaagggcatgataatttac | sigma70 | sigma70 |
| 15 | ttacgaggttttaattctgcctctttcaacccgcgtcaaaataaaacagtagaatattaaTctttttttgtgtttatgtgc | sigma70 | sigma70 |
| 16 | gatttcaaattggtcaatggtcaaaagttaataaacccattgctgcgtttatattatcgtCgtgctatggtacatacattc | sigma70 | sigma70 |
| 17 | cgcaaagctgaccgcacaaaaggggagtgcttttctgtgcttagcggttagaatagtctcAtgactatatctggagttgac | sigma70 | sigma70 |
| 18 | aataaccacactgtgaatgttgtctttaatcaattgtaagtgcatgtaaaataccactttAgagttagtcagtatcttcct | sigma70 | sigma70 |
| 19 | aacgtaaaaaatcgttgcgcaatcgtggatttttaccctgctttgtttttataatggtgcGcacttttatatccagaaaaa | sigma70 | sigma70 |
| 20 | ttcagtgataattatcacatttcaattgcacattaatggatattctttaataatctcgcgAcgtttctttatgataaataa | sigma70 | sigma70 |
| 21 | catttaaattatttaatcatgtttattgcatataaattcacttgatggcattgttatcccAtgccgcagacacggccaaaa | sigma70 | sigma70 |
| 22 | ttttaacttttaaagcagaaatattgcataattattctgtcaaaggtactatcttcgaccTcaatagctatcagactgcca | sigma70 | sigma70 |
| 23 | ataaaaaatgaacaattcactctcttgcttatttagtgacaactattcatgattttgtgaAaccggtttcttaattccgtt | sigma70 | sigma24 |
| 24 | aatatttttcccgccgattgtgcaaggacaatcggcaaacggtgcagtacactgcgttgaTtgcgtgtaaagggatgaaaa | sigma70 | sigma70 |
| 25 | gagttaggctttttattgaatgattattgcatgtgtgtcggtttttgttgcttaatcataAgcaacaggacgcaggagtat | sigma70 | sigma70 |
| 26 | tcattcaataaaaagcctaactcacttttgattcattaaaaaagaaggctaaaatagaatGaatcatcaatccgcataaga | sigma70 | sigma70 |
| 27 | aatgacttatgaaatttagtgttgacagacaaggtaccgctaagtaatattcgccccgttCacacgattcctctgtagttc | sigma70 | sigma70 |
| 28 | ttggggaatttaaaaatcgggtttgacaaaagatttttcgccgttaagatgtgcctcaacAacgattcctctgtagttcag | sigma70 | sigma70 |
| 29 | caaaaaaatgcatttcaccctttgacatcaccatgcactgccattaatatgcgccccgttCacacgattcctctgtagttc | sigma70 | sigma70 |
| 30 | accgacacttaaagtgatccagattacggtagaaatcctcaagcagcatatgatctcgggTattcggtcgatgcaggggat | sigma70 | sigma70 |
| 31 | ttcaaaagatgagaaaaaccgttgacgaaggtcgaggcaatccgtaatattcgcctcgttCccaacggaacacaacgcgga | sigma70 | sigma70 |
| 32 | ggctggcacgaaccctgcaatctacatttacagcgcaaacattacttattattaacatatAaataacgaattatttactgt | sigma70 | sigma70 |
| 33 | ctccctgaaagacaccatccgtggctttaaaggcatcatggaaggcgaatacgatcacctGccggagcaggcgttctacat | sigma70 | sigma70 |
| 34 | ttattcaccttttggctacttattgtttgaaatcacgggggcgcaccgtataatttgaccGctttttgatgcttgactcta | sigma70 | sigma70 |
| 35 | gaacataggcttcgatttattgcgctatctctgtggcaggattgtgaataaagtgtcaacAagcaacggggcatcgcccat | sigma70 | sigma70 |
| 36 | tttatgtgatttgtatcacataaagattgatttttgtgatggttgtcatattataagcgcAaagacaataacacctgtata | sigma70 | sigma70 |
| 37 | gaacataggcttcgatttattgcgctatctctgtggcaggattgtgaataaagtgtcaacAagcaacggggcatcgcccat | sigma70 | sigma70 |
| 38 | tttatgtgatttgtatcacataaagattgatttttgtgatggttgtcatattataagcgcAaagacaataacacctgtata | sigma70 | sigma70 |
| 39 | ccgtcaggtatggatgggcggtgaagagttgattctgacgcccaaagaatatgctctgctGtcacggttaatgctcaaagc | sigma70 | sigma70 |
| 40 | ttggggtgctcttgacagctatttttgatatgatttgagattcaactctcaaatttgtgaAaaatataaggtgttggaatg | sigma70 | sigma38 |
| 41 | tttggactattccttggggtgctcttgacagctatttttgatatgatttgagattcaactCtcaaatttgtgaaaaatata | sigma70 | sigma38 |
| 42 | attgagcaagcgttcaaagccctatgtacagaactcaatgcacaaggcagtattaacgtcGtcaattattcccaacatgat | sigma70 | sigma70 |
| 43 | agggcatattccgtgtgctgacttctctggtttcctgggttgtatcgtttattccgcgccGcccggagcggagcgaaacgg | sigma70 | sigma70 |
| 44 | aaaatcacacgtcttgtgaccttctaaattgattcacatgctaaatctgataagttttaaTttcaatggtaggtttatttc | sigma70 | sigma24 |
| 45 | tacggcgagacgggaatttgctcactttttgactttccgttacgcaacagaaaaagttaaAaacgaaaagactaaaatcac | sigma70 | sigma70 |
| 46 | ttacaaaacctgttgacagaaagttaaaacagttttgtaatgcatgttacataataaatcAaggagtccttatgggcgctt | sigma70 | sigma70 |
| 47 | acctgtaaaagcgcccataaggactccttgatttattatgtaacatgcattacaaaactgTtttaactttctgtcaacagg | sigma70 | sigma70 |
| 48 | tacacccaggtgaagtccatccaggttgagatggctaaattccagtccatattctaaccaGgaggtttatttgcaatttga | sigma70 | sigma70 |
| 49 | cgtaacaattaagacacattttatattgaacgtccaatcaataaccgctttaatagataaAcaccgctgatgaatggagtg | sigma70 | sigma70 |
| 50 | tttatctattaaagcggttattgattggacgttcaatataaaatgtgtcttaattgttacGaatttgattttaaatagtaa | sigma70 | sigma70 |
| 51 | cctctgccgaagccctgcaacaggccattgacgataatttctggcaagccgaataccgcgActaccgccgtacctccatct | sigma28 | sigma38 |
| 52 | aattgcgatctaaatcaaattaatcggttaaagataaccgcagcggggccgacataaactCtgacaagaagttaacaacca | sigma28 | sigma28 |
| 53 | cttgccggaaggcgaggtctatgcataaaaagcagcggctgacgtcttccgacgttggccGtttttttatgtgtaaggaac | sigma28 | sigma70 |
| 54 | accaaaaactatcgtgccagctacaacgttgaaggtgcgttccaggcctccaacaaaaatAtcgccgatgcggttaacagt | sigma28 | sigma70 |
| 55 | gtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtGtggggtctccccatgcgaga | sigma28 | sigma70 |
| 56 | ctggcgattgcggcgctgaaagagatctaccgcaccaccagcgaaatgccggtagaagaaGcgtatcgctatattcgcagc | sigma28 | sigma70 |
| 57 | catcggttctgcattcggaagatgccattgaagggccgctggcgtttgccgagaagcgcgAtccggtgtggaaaggacgtt | sigma28 | sigma28 |
| 58 | gataaagtaatggggctgattcacaccattaaaggcttcgagattgctgccagtaacgccGcacttagcggagaatttaac | sigma28 | sigma70 |
| 59 | ccgacgtcattatctctaaccgaatggcagaagagcttaaggatgtggcagataaggtatAcacccgcgatctctttggca | sigma28 | sigma24 |
| 60 | taagctcttgtcagcggcagggcgttctgccgataaccgtaaccgaagatgataactgacAatgggtaaaacgaacgactg | sigma28 | sigma70 |
| 61 | caaccagcaagagaacatctggcctgcgggcaccactgctacagtggtggtcactggcaaAcaagatcgcgacgaaagcca | sigma24 | sigma24 |
| 62 | agcaagagaacatctggcctgcgggcaccactgctacagtggtggtcactggcaaacaagAtcgcgacgaaagccaggatt | sigma24 | sigma24 |
| 63 | ccgcgacctttgccgcaagcctcggtctgaaagttaacgccggacacggtctgacctatcAcaacgtgaaagccattgccg | sigma24 | sigma24 |
| 64 | caagagctggcgcgtatcgccaaagccgcgacctttgccgcaagcctcggtctgaaagttAacgccggacacggtctgacc | sigma24 | sigma24 |
| 65 | tagatgtccttgattaacaccaaaattaaaccttttaaaaaccaggcattcaaaaacggcGaattcatcgaaatcaccgaa | sigma24 | sigma24 |
| 66 | tattttatctacaaaaactgactaaataaaaatttttcactaattgattagtcatagccaGcgatatacgctatgcgaaaa | sigma24 | sigma70 |
| 67 | atttgcctgatttttcagcgattgaaactacacgttgcaatttgccgttgacacattcggGcggaattcatatgatgccgc | sigma24 | sigma70 |
| 68 | cagggttatagcggcgaggcggcatgttaaaactccagatagctaacgaatcataaggtaGaaacatgctactctgaaccg | sigma24 | sigma24 |
| 69 | aatatcgccgatgcggttaacagtgtgctgaccgataccatcgctgatatgtctcaggacAccagcatccacgaattcatc | sigma24 | sigma24 |
| 70 | gtgcaatcattgaaaccccgctgggcaccatgcagggtcactacgaaatgatcgatgaaaAtggcgtccctttcagcatcg | sigma24 | sigma70 |
| 71 | atttacattaactcctttttttctccacgattggctcgtaccttgccgctacagtgaagcAagtcaagcctacaacgatac | sigma54 | sigma70 |
| 72 | gatctcctttgttctcaccggtatctacatctggcgggcgaacggcgaattcgaccgtctTaataatgaagtcctgcatga | sigma54 | sigma24 |
| 73 | tatttaacgttgaatgttactgttgtcgtcaagatggcataagacctgcatgaaagagccTgcaaacacacaacacaatac | sigma54 | sigma70 |
| 74 | aaaaagcagtatttcggcgagtagcgcagcttggtagcgcaactggtttgggaccagtggGtcggaggttcgaatcctctc | sigma54 | sigma24 |
| 75 | tagcctccgccgtttatgcacttttatcactggctggcacgaaccctgcaatctacatttAcagcgcaaacattacttatt | sigma54 | sigma38 |
| 76 | attagttaaataactaaatccaataatctcattctggcactccccttgctattgcctgacTgtacccacaacggtgtatgc | sigma54 | sigma70 |
| 77 | agttaaagctattcgtgcggtgttgccttgcaagtggtccgtggattgcatattgtcccgTtagtggtttcaaaatgagca | sigma54 | sigma70 |
| 78 | tgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagaTagcaatgacgttaccgagtg | sigma54 | sigma38 |
| 79 | acatcctatcacaggattgaaagtaggggaaaatggcagggttttctctttgtgcctcatCattaccataattaacggaat | sigma54 | sigma70 |
| 80 | ttaagccagcattctggcgcttatcccggcatggcatgagatctgcataagcggaaagcgCagcaatttttgtcttataca | sigma54 | sigma24 |
| 81 | tttgcaaaaatttgatttggatcacgtaatcagtacccagaagtgagtaatcttgcttacGccacctggaagtgacgcatt | sigma38 | sigma70 |
| 82 | tacgaaaatggctcacccgaaatatcatacttctgcctttagctccgtctctataatttgGgaaaattgtttctgaatgtt | sigma38 | sigma70 |
| 83 | gctgtcgtaaagctgttaccgactggcgaagatttcgccagtcacgtctacccttgttatAcctcacaccgcaaggagacg | sigma38 | sigma38 |
| 84 | gaataatggtgataactatcatcgccaggatgaataaacattgttcatggcaacttatatGactttttcattaaagcaatc | sigma38 | sigma70 |
| 85 | acccataaagaataatggtgataactatcatcgccaggatgaataaacattgttcatggcAacttatatgactttttcatt | sigma38 | sigma70 |
| 86 | gcacatcatcctgattatgattgtgtatttaattggttgttatttgactactatcaacttGttttaattttatgataggtg | sigma38 | sigma70 |
| 87 | aatgctttgttttccgattaatttaacgaatgtcattcgtttttgccctacacaaaacgaCactaaagctggagagaacca | sigma38 | sigma54 |
| 88 | ccgcccccgttattttgtgctatgtttattgaataatgcgctttgcttttaacttttaaaGcagaaatattgcataattat | sigma38 | sigma70 |
| 89 | gacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaataatgcGctttgcttttaacttttaaa | sigma38 | sigma70 |
| 90 | tccgccgtttatgcacttttatcactggctggcacgaaccctgcaatctacatttacagcGcaaacattacttattattaa | sigma38 | sigma38 |
| 91 | gggcaccactgctacagtggtggtcactggcaaacaagatcgcgacgaaagccaggattcGttcttccgtaaaatggccca | sigma32 | sigma70 |
| 92 | ggtgtcatcatgcgctacgctctatggctccctgacgtttttttagccacgtatcaattaTaggtacttccatgtcgagta | sigma32 | sigma38 |
| 93 | acagtacgtcgtactttatttctgtctttaaagacttctacggtatgacgccgctgcattAtgttagtcagcacagagaac | sigma32 | sigma70 |
| 94 | aagaatcagaacaattcactatataacattgcatgtaaagcatatacacctcattattttGtcattattaagttattaaca | sigma32 | sigma70 |
| 95 | ccgcagaaccgcttgccggtatgggttttgaaacctatgccattgccagcgccatcattgGcggcaccagtttcttcggcg | sigma32 | sigma70 |
| 96 | gccggacaaccgttcattcctgaaatgctggataaacttgccgaactgaaggcatggcgtGaacgagaaggtctggagtac | sigma32 | sigma24 |
| 97 | tgaccaaaaactatcgtgccagctacaacgttgaaggtgcgttccaggcctccaacaaaaAtatcgccgatgcggttaaca | sigma32 | sigma70 |
| 98 | gagcaggcagatgagcgtcaggcactgagccttgcgatgcctaaagtcagccaggctgttGcctgagtaaggagagtatga | sigma32 | sigma24 |
| 99 | gggcagtagtctgcctgattaattttcttttaaatgatagatatagagtaccacatcgcgGctttctatgcgttgttcaat | sigma32 | sigma70 |
| 100 | gagttacacccaggtgaagtccatccaggttgagatggctaaattccagtccatattctaAccaggaggtttatttgcaat | sigma32 | sigma70 |
