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Team:DTU-Denmark/ToxicityExperiment
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== Description == | == Description == | ||
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| + | Determine whether the ions nitrite, nitrate and ammonium are toxic to ''E. coli'', and at what concentration. This experiment will use the Biolector to grow an ''E. coli'' strain that constitutively expresses RFP in the presence of these ions (at a range of concentrations) to determine the OD and fluorescence of the cells as a proxy for growth. | ||
== Results == | == Results == | ||
| - | [[File:DTU-Denmark- | + | The graphs in the following sections show the response in biomass and fluorescence of GFP over time for varying concentrations of each ion. The data has been baseline adjusted by using a script from Chris Workman (unpublished). The horizontal facets show concentrations in mM. |
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| + | ==== Ammonium ==== | ||
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| + | [[File:DTU-Denmark-Toxicity-Ammonium-parsed.png|600px]] | ||
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| + | ==== Nitrate ==== | ||
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| + | [[File:DTU-Denmark-Toxicity-Nitrate-parsed.png|600px]] | ||
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| + | ==== Nitrite ==== | ||
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| + | [[File:DTU-Denmark-Toxicity-Nitrite-parsed.png|600px]] | ||
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| + | == Conclusions == | ||
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| + | Very high concentrations of ammonium ≥500 mM were able to inhibit growth of ''E. coli''. Nitrate at concentrations of 25mM and greater also inhibits growth of ''E. coli'', whereas concentrations of nitrate at 5mM and greater show delayed expression of GFP and slower growth. The tested concentrations of nitrite were not sufficient to inhibit growth. | ||
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| + | == Discussion == | ||
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| + | The average concentration of ammonium in wastewater treatment plants is 70 mg/L [1] which is much less than 500mM that we found to be toxic to ''E. coli''. If we assume the ammonia is stoichiometrically converted to nitrite via our mutants, the concentrations of nitrite that will be produced with this volume of ammonium will also not be toxic to the cell. We do not expect that a significant amount of nitrate will be produced during this process, since ''E. coli'' contains the Nap pathway that converts nitrate to nitrite. Therefore, we can expect that our transformants will survive in this environment. | ||
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| + | ==References== | ||
| + | [1] Sotirakou, E. ,Kladitis, G., Diamantis, N., Grigoropoulou, H.; Ammonia and Phosphorous Removal in Municipal Wastewater Treatment Plant With Extended Aeration. "Global Nest", Sept. 1999, Vol. 1, No 1, pp 47-53. | ||
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| + | {{:Team:DTU-Denmark/Templates/EndPage}} | ||
Latest revision as of 15:04, 4 October 2013
Toxicity Experiment
Contents |
Description
Determine whether the ions nitrite, nitrate and ammonium are toxic to E. coli, and at what concentration. This experiment will use the Biolector to grow an E. coli strain that constitutively expresses RFP in the presence of these ions (at a range of concentrations) to determine the OD and fluorescence of the cells as a proxy for growth.
Results
The graphs in the following sections show the response in biomass and fluorescence of GFP over time for varying concentrations of each ion. The data has been baseline adjusted by using a script from Chris Workman (unpublished). The horizontal facets show concentrations in mM.
Ammonium
Nitrate
Nitrite
Conclusions
Very high concentrations of ammonium ≥500 mM were able to inhibit growth of E. coli. Nitrate at concentrations of 25mM and greater also inhibits growth of E. coli, whereas concentrations of nitrate at 5mM and greater show delayed expression of GFP and slower growth. The tested concentrations of nitrite were not sufficient to inhibit growth.
Discussion
The average concentration of ammonium in wastewater treatment plants is 70 mg/L [1] which is much less than 500mM that we found to be toxic to E. coli. If we assume the ammonia is stoichiometrically converted to nitrite via our mutants, the concentrations of nitrite that will be produced with this volume of ammonium will also not be toxic to the cell. We do not expect that a significant amount of nitrate will be produced during this process, since E. coli contains the Nap pathway that converts nitrate to nitrite. Therefore, we can expect that our transformants will survive in this environment.
References
[1] Sotirakou, E. ,Kladitis, G., Diamantis, N., Grigoropoulou, H.; Ammonia and Phosphorous Removal in Municipal Wastewater Treatment Plant With Extended Aeration. "Global Nest", Sept. 1999, Vol. 1, No 1, pp 47-53.
