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Team:Shenzhen BGIC 0101/Software
From 2013.igem.org
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<h1>Overview：Genome Design Suite</h1> | <h1>Overview：Genome Design Suite</h1> | ||
| - | <p>Genovo is a Computer-Aided Design（CAD） suite to assist users to create new system denovo.</p> | + | <p>Genovo is a <b>Computer-Aided Design（CAD） suite</b> to assist users to create new system denovo.</p> |
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It sets us free in the laborious, complex creating procedure, including choosing genes of new system (here the system refers to new pathways which is in form of a chromosome), changing chromosome’s structure, editing coding DNA sequence, splitting the chromosome into equipped fragments for synthesis and assembly. | It sets us free in the laborious, complex creating procedure, including choosing genes of new system (here the system refers to new pathways which is in form of a chromosome), changing chromosome’s structure, editing coding DNA sequence, splitting the chromosome into equipped fragments for synthesis and assembly. | ||
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| + | Genovo’s UI is mainly developed on a genome browser, <a href="http://www.gmod.org/wiki/JBrowse">Jbrowse</a> interface<br/> | ||
| + | <img src="https://static.igem.org/mediawiki/2013/8/82/Genovoui.png" width=850px /> | ||
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| + | Functionally, Genovo is partially based on <a href="http://54.235.254.95/gd/">GeneDesign</a> algorithm suite, and BioStudio development environment under <a href="http://syntheticyeast.org/">SC2.0 project</a>, but it has great extensions. | ||
</p> | </p> | ||
Latest revision as of 16:09, 28 October 2013
Overview：Genome Design Suite
Genovo is a Computer-Aided Design（CAD） suite to assist users to create new system denovo.
It sets us free in the laborious, complex creating procedure, including choosing genes of new system (here the system refers to new pathways which is in form of a chromosome), changing chromosome’s structure, editing coding DNA sequence, splitting the chromosome into equipped fragments for synthesis and assembly.
Genovo’s UI is mainly developed on a genome browser, Jbrowse interface
Functionally, Genovo is partially based on GeneDesign algorithm suite, and BioStudio development environment under SC2.0 project, but it has great extensions.
