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From 2013.igem.org

Revision as of 03:51, 5 October 2013 (view source) Charly (Talk | contribs) ← Older edit		Latest revision as of 03:46, 29 October 2013 (view source) JuliaS1992 (Talk | contribs)
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	== Database updates ==		== Database updates ==
-		+	As many organisms have several NRPS pathways and some NRPS pathways are present in different organisms (e.g. different bacterial strains) the database was changed in order to separate origin and product. The coding sequences now function as many to many connection between origin and products.
	== Integrating NRPS-PKS ==		== Integrating NRPS-PKS ==
		+	We manually put all the organisms and pathways annotated in NRPS-PKS in our database. This basis was then used to write simple scraping script.

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Latest revision as of 03:46, 29 October 2013

Database updates

As many organisms have several NRPS pathways and some NRPS pathways are present in different organisms (e.g. different bacterial strains) the database was changed in order to separate origin and product. The coding sequences now function as many to many connection between origin and products.

Integrating NRPS-PKS

We manually put all the organisms and pathways annotated in NRPS-PKS in our database. This basis was then used to write simple scraping script.