Team:DTU-Denmark/Notebook/1 August 2013
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(→PCR) |
(→USER reaction with HAO and pZA21 (native)) |
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Per reaction: | Per reaction: | ||
- | USER enzyme - 1 uL | + | * USER enzyme - 1 uL |
- | NEB buffer 4 - 0.5 uL | + | * NEB buffer 4 - 0.5 uL |
- | 10x BSA - 0.5 uL | + | * 10x BSA - 0.5 uL |
- | backbone - 1 uL | + | * backbone - 1 uL |
- | fragment - 7 uL | + | * fragment - 7 uL |
Made doubles and negative. One reaction is incubated with top10 competent cells, the other with our competent cells. | Made doubles and negative. One reaction is incubated with top10 competent cells, the other with our competent cells. |
Revision as of 16:39, 1 August 2013
1 August 2013
Contents |
lab ...
Main purpose
Who was in the lab
Procedure
gel purification
Gel purified HAO fragment for USER cloning and pZA21 with endings for cloning with the 2-part Nir. Used QIAEX kit (without columns).
PCR
Set up PCR to amplify AMO as fragment for USER cloning. Run triplicates on 50C and 3:00 and dublicates on a ramp program 56C -> 50C with 0.1C/s and 3:00
USER reaction with HAO and pZA21 (native)
Procedure as protocolled.
Per reaction:
- USER enzyme - 1 uL
- NEB buffer 4 - 0.5 uL
- 10x BSA - 0.5 uL
- backbone - 1 uL
- fragment - 7 uL
Made doubles and negative. One reaction is incubated with top10 competent cells, the other with our competent cells.
LB+Kan plates
Made agar plates from LB medium and added Kanamycin to final concentration of 30 ug/ml.
Results
Gels
1% gel for PCR of cytochromes with His-tag
- neg
- cycAX with His-tag at 45C
- cycAX with His-tag at 45C
- cycAX with His-tag at 50C
- cycAX with His-tag at 50C
- 1 kb ladder
1% gel for PCR products of Nir
- 1 kb ladder
- Nir part 2
- Nir part 2
- Nir part 1
- Nir part 1
- neg
Conclusion
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