Team:UCSF/kendall

From 2013.igem.org

(Difference between revisions)
(Created page with "<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en"...")
 
(3 intermediate revisions not shown)
Line 3: Line 3:
<head>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-
<meta name="generator" content="MediaWiki 1.16.0" />
+
<meta name="generator" content="MediaWiki 1.16.5" />
-
<link rel="alternate" type="application/x-wiki" title="Edit" href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=edit" />
+
-
<link rel="edit" title="Edit" href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=edit" />
+
<link rel="shortcut icon" href="/favicon.ico" />
<link rel="shortcut icon" href="/favicon.ico" />
-
<link rel="search" type="application/opensearchdescription+xml" href="/wiki/opensearch_desc.php" title="2012.igem.org (en)" />
+
<link rel="search" type="application/opensearchdescription+xml" href="/wiki/opensearch_desc.php" title="2013.igem.org (en)" />
-
<link title="Creative Commons" type="application/rdf+xml" href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=creativecommons" rel="meta" />
+
<link title="Creative Commons" type="application/rdf+xml" href="/wiki/index.php?title=Team:UCSF/lily&amp;action=creativecommons" rel="meta" />
<link rel="copyright" href="http://creativecommons.org/licenses/by/3.0/" />
<link rel="copyright" href="http://creativecommons.org/licenses/by/3.0/" />
-
<link rel="alternate" type="application/atom+xml" title="2012.igem.org Atom feed" href="/wiki/index.php?title=Special:RecentChanges&amp;feed=atom" /> <title>Team:Johns Hopkins-Software - 2012.igem.org</title>
+
<link rel="alternate" type="application/atom+xml" title="2013.igem.org Atom feed" href="/wiki/index.php?title=Special:RecentChanges&amp;feed=atom" /> <title>Team:UCSF/lily - 2013.igem.org</title>
<style type="text/css" media="screen, projection">/*<![CDATA[*/
<style type="text/css" media="screen, projection">/*<![CDATA[*/
@import "/wiki/skins/common/shared.css?270";
@import "/wiki/skins/common/shared.css?270";
Line 33: Line 31:
wgVariantArticlePath=false,
wgVariantArticlePath=false,
wgActionPaths={},
wgActionPaths={},
-
wgServer="https://2012.igem.org",
+
wgServer="https://2013.igem.org",
wgCanonicalNamespace="",
wgCanonicalNamespace="",
wgCanonicalSpecialPageName=false,
wgCanonicalSpecialPageName=false,
wgNamespaceNumber=0,
wgNamespaceNumber=0,
-
wgPageName="Team:Johns_Hopkins-Software",
+
wgPageName="Team:UCSF/lily",
-
wgTitle="Team:Johns Hopkins-Software",
+
wgTitle="Team:UCSF/lily",
wgAction="view",
wgAction="view",
-
wgArticleId=264,
+
wgArticleId=8502,
wgIsArticle=true,
wgIsArticle=true,
-
wgUserName="Kfkearns",
+
wgUserName=null,
-
wgUserGroups=["*", "user", "autoconfirmed"],
+
wgUserGroups=null,
wgUserLanguage="en",
wgUserLanguage="en",
wgContentLanguage="en",
wgContentLanguage="en",
wgBreakFrames=false,
wgBreakFrames=false,
-
wgCurRevisionId=296480,
+
wgCurRevisionId=64631,
-
wgVersion="1.16.0",
+
wgVersion="1.16.5",
wgEnableAPI=true,
wgEnableAPI=true,
wgEnableWriteAPI=true,
wgEnableWriteAPI=true,
Line 54: Line 52:
wgDigitTransformTable=["", ""],
wgDigitTransformTable=["", ""],
wgMainPageTitle="Main Page",
wgMainPageTitle="Main Page",
-
wgFormattedNamespaces={"-2": "Media", "-1": "Special", "0": "", "1": "Talk", "2": "User", "3": "User talk", "4": "2012.igem.org", "5": "2012.igem.org talk", "6": "File", "7": "File talk", "8": "MediaWiki", "9": "MediaWiki talk", "10": "Template", "11": "Template talk", "12": "Help", "13": "Help talk", "14": "Category", "15": "Category talk"},
+
wgFormattedNamespaces={"-2": "Media", "-1": "Special", "0": "", "1": "Talk", "2": "User", "3": "User talk", "4": "2013.igem.org", "5": "2013.igem.org talk", "6": "File", "7": "File talk", "8": "MediaWiki", "9": "MediaWiki talk", "10": "Template", "11": "Template talk", "12": "Help", "13": "Help talk", "14": "Category", "15": "Category talk"},
-
wgNamespaceIds={"media": -2, "special": -1, "": 0, "talk": 1, "user": 2, "user_talk": 3, "2012.igem.org": 4, "2012.igem.org_talk": 5, "file": 6, "file_talk": 7, "mediawiki": 8, "mediawiki_talk": 9, "template": 10, "template_talk": 11, "help": 12, "help_talk": 13, "category": 14, "category_talk": 15, "image": 6, "image_talk": 7},
+
wgNamespaceIds={"media": -2, "special": -1, "": 0, "talk": 1, "user": 2, "user_talk": 3, "2013.igem.org": 4, "2013.igem.org_talk": 5, "file": 6, "file_talk": 7, "mediawiki": 8, "mediawiki_talk": 9, "template": 10, "template_talk": 11, "help": 12, "help_talk": 13, "category": 14, "category_talk": 15, "image": 6, "image_talk": 7},
-
wgSiteName="2012.igem.org",
+
wgSiteName="2013.igem.org",
wgCategories=[],
wgCategories=[],
-
wgMWSuggestTemplate="https://2012.igem.org/wiki/api.php?action=opensearch\x26search={searchTerms}\x26namespace={namespaces}\x26suggest",
+
wgMWSuggestTemplate="https://2013.igem.org/wiki/api.php?action=opensearch\x26search={searchTerms}\x26namespace={namespaces}\x26suggest",
-
wgDBname="2012_igem_org",
+
wgDBname="2013_igem_org",
wgSearchNamespaces=[0],
wgSearchNamespaces=[0],
wgMWSuggestMessages=["with suggestions", "no suggestions"],
wgMWSuggestMessages=["with suggestions", "no suggestions"],
wgRestrictionEdit=[],
wgRestrictionEdit=[],
-
wgRestrictionMove=[],
+
wgRestrictionMove=[];
-
wgAjaxWatch={"watchMsg": "Watch", "unwatchMsg": "Unwatch", "watchingMsg": "Watching...", "unwatchingMsg": "Unwatching...", "tooltip-ca-watchMsg": "Add this page to your watchlist", "tooltip-ca-unwatchMsg": "Remove this page from your watchlist"};
+
</script>                 
</script>                 
<script type="text/javascript" src="/wiki/skins/common/wikibits.js?270"><!-- wikibits js --></script>
<script type="text/javascript" src="/wiki/skins/common/wikibits.js?270"><!-- wikibits js --></script>
<!-- Head Scripts -->
<!-- Head Scripts -->
<script src="/wiki/skins/common/ajax.js?270"></script>
<script src="/wiki/skins/common/ajax.js?270"></script>
-
<script src="/wiki/skins/common/ajaxwatch.js?270"></script>
 
<script src="/wiki/skins/common/mwsuggest.js?270"></script>
<script src="/wiki/skins/common/mwsuggest.js?270"></script>
-
<script type="text/javascript" src="/wiki/index.php?title=-&amp;action=raw&amp;smaxage=0&amp;gen=js&amp;useskin=igem"><!-- site js --></script>
+
<script type="text/javascript" src="/wiki/index.php?title=-&amp;action=raw&amp;gen=js&amp;useskin=igem"><!-- site js --></script>
<!-- jQuery Javascript -->
<!-- jQuery Javascript -->
<script type='text/javascript'        src ='/common/jquery-latest.min.js'></script>
<script type='text/javascript'        src ='/common/jquery-latest.min.js'></script>
Line 81: Line 77:
</head>
</head>
-
<body              class="mediawiki  ltr ns-0 ns-subject page-Team_Johns_Hopkins-Software">
+
<body              class="mediawiki  ltr ns-0 ns-subject page-Team_UCSF_lily">
   <div id="globalWrapper">
   <div id="globalWrapper">
Line 88: Line 84:
    <a href="/Main_Page"
    <a href="/Main_Page"
      title="Main Page">
      title="Main Page">
-
    <img src='/wiki/skins/common/images/wiki.png'>"
+
    <img src='/wiki/skins/common/images/wiki.jpg'>"
    </a>
    </a>
</div>  <!-- end p-logo -->
</div>  <!-- end p-logo -->
Line 98: Line 94:
    <ul>
    <ul>
                    <li  
                    <li  
-
                 class='selected'       ><a href="/Team:Johns_Hopkins-Software">Page              </a></li>
+
                 class='selected'       ><a href="/Team:UCSF/lily">Page              </a></li>
               <li  
               <li  
-
                 class='new'       ><a href="/wiki/index.php?title=Talk:Team:Johns_Hopkins-Software&amp;action=edit&amp;redlink=1">Discussion              </a></li>
+
                 class='new'       ><a href="/wiki/index.php?title=Talk:Team:UCSF/lily&amp;action=edit&amp;redlink=1">Discussion              </a></li>
               <li  
               <li  
-
                     ><a href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=edit">Edit               </a></li>
+
                     ><a href="/wiki/index.php?title=Team:UCSF/lily&amp;action=edit">View source               </a></li>
               <li  
               <li  
-
                     ><a href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=history">History               </a></li>
+
                     ><a href="/wiki/index.php?title=Team:UCSF/lily&amp;action=history">History              </a></li>
-
              <li
+
               <li style='color:white;cursor:default'>teams</li>
-
                    ><a href="/Special:MovePage/Team:Johns_Hopkins-Software">Move              </a></li>
+
-
              <li
+
-
                    ><a href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=watch">Watch               </a></li>
+
-
               <li style='color:#808080;cursor:default'>teams</li>
+
    </ul>
    </ul>
  </div> <!-- end menubar (left) -->
  </div> <!-- end menubar (left) -->
Line 115: Line 107:
<div class="right-menu noprint" id="menubar">
<div class="right-menu noprint" id="menubar">
    <ul>
    <ul>
-
                 <li id="pt-userpage"><a href="/User:Kfkearns" title="Your user page [.]" accesskey="." class="new">Kfkearns</a></li>                              <li id='pt-preferences'><a href='https://igem.org/User_Information' title='My account'>My account</a></li>
+
                 <li id="pt-login"><a href="/wiki/index.php?title=Special:UserLogin&amp;returnto=Team:UCSF/lily" title="You are encouraged to log in; however, it is not mandatory [o]" accesskey="o">Log in</a></li>     </ul>
-
                          <li id="pt-logout"><a href="/wiki/index.php?title=Special:UserLogout&amp;returnto=Team:Johns_Hopkins-Software" title="Log out">Log out</a></li>     </ul>
+
</div><!-- end right menubar -->
</div><!-- end right menubar -->
<div id="search-controls" class="noprint">
<div id="search-controls" class="noprint">
<form action="/Special:Search" id="searchform">
<form action="/Special:Search" id="searchform">
-
<input id="searchInput" name="search" type="text" title="Search 2012.igem.org [f]" accesskey="f" value="" />
+
<input id="searchInput" name="search" type="text" title="Search 2013.igem.org [f]" accesskey="f" value="" />
<input type='submit' name="go" class="searchButton" id="searchGoButton" value="Go" title="Go to a page with this exact name if exists" />&nbsp;
<input type='submit' name="go" class="searchButton" id="searchGoButton" value="Go" title="Go to a page with this exact name if exists" />&nbsp;
      <input type='submit' name="fulltext" class="searchButton" id="mw-searchButton" value="Search" title="Search the pages for this text" />
      <input type='submit' name="fulltext" class="searchButton" id="mw-searchButton" value="Search" title="Search the pages for this text" />
Line 129: Line 120:
     <div id="content">
     <div id="content">
<a name="top" id="top"></a>
<a name="top" id="top"></a>
-
<h1 class="firstHeading">Team:Johns Hopkins-Software</h1>
+
<h1 class="firstHeading">Team:UCSF/lily</h1>
<div id="bodyContent">
<div id="bodyContent">
-
<h3 id="siteSub" class='noprint'>From 2012.igem.org</h3>
+
<h3 id="siteSub" class='noprint'>From 2013.igem.org</h3>
<div id="contentSub"></div>
<div id="contentSub"></div>
<!--
<!--
Line 137: Line 128:
<!-- start content -->
<!-- start content -->
<p>
<p>
-
</div></div></div></div></div></div></div></div></div></div></div></div>
+
<!--
 +
Currently unable to implement the CSS switching due to the stupidity of the wiki. Will work on other things instead.
 +
 
 +
New header structure
 +
-->
<head>
<head>
 +
<!--CSS styles: global-->
 +
<!--<link rel='stylesheet' type='text/css' href="https://2012.igem.org/Team:Calgary/static/basicpageglobal.css?action=raw&amp;ctype=text/css" />-->
 +
<style type="text/css">
 +
    /***
 +
Minimal header: removes the search bar and header image and readjusts font colours in the menus.
-
<!-- Remove all empty <p> tags -->
+
Thanks a lot to the 2011 Brown-Stanford, 2012 Lethbridge iGEM and 2012 Calgary teams for snippets of their code!
-
<script type="text/javascript">
+
Check out their wikis at:
-
    $(document).ready(function() {
+
https://2011.igem.org/Team:Brown-Stanford
-
        $("p").filter( function() {
+
https://2012.igem.org/Team:Lethbridge
-
            return $.trim($(this).html()) == '';
+
https://2012.igem.org/Team:Calgary
-
        }).remove()
+
***/
-
    });
+
-
</script>
+
-
<link rel="stylesheet" href="https://2012.igem.org/Team:Johns_Hopkins-Software/Templates/cssindex?action=raw&amp;ctype=text/css" type="text/css"/>
+
#content h1.firstHeading {
-
</head>
+
visibility:hidden;
 +
}
 +
#p-logo {
 +
display: none;
 +
}
 +
#searchform {
 +
    display: none;
 +
}
 +
.left-menu {
 +
background-color: #555;
 +
 +
}
 +
.left-menu a {
 +
    color: #000;
 +
}
-
<div id="header_new">
+
div#top-section{ /*the div containing the entire top bar*/
-
<div id="headerimgs">
+
height: 20px;
-
<div id="headerimg1" class="headerimg"></div>
+
margin-bottom: 0px !important;
-
<div id="headerimg2" class="headerimg"></div>
+
border: none;
-
</div>
+
}
-
</div>
+
-
<div id="back" class="btn"></div>
 
-
<div id="next" class="btn"></div>
 
-
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.1/jquery.min.js"></script>
+
#content{
 +
margin-top: 0px;
 +
}
 +
#search-controls {
 +
overflow:hidden;
 +
display:none;
 +
background: none;
 +
position: absolute;
 +
top: 170px;
 +
right: 40px;
 +
}
-
    <script type='text/javascript' src='http://ajax.googleapis.com/ajax/libs/jquery/1.3.2/jquery.min.js?ver=1.3.2'></script>
+
div#header {
-
   
+
width: 975px;
 +
text-align: left;
 +
margin-left: auto;
 +
margin-right: auto;
 +
margin-bottom: 0px !important;
 +
} 
 +
#menubar {
 +
position: absolute;
 +
background: none;
 +
color: black;
 +
}
 +
.left-menu, .right-menu{
 +
position: absolute;
 +
background: none;
 +
color: black;
 +
}
 +
.left-menu li a, .right-menu li a {
 +
color: #000 !important;
 +
}
-
<body>
 
 +
.left-menu ul li, .right-menu ul li a{
 +
background: none;
 +
color: #000 !important;
 +
}
-
</body>
+
.left-menu li a:hover, .right-menu li a:hover, .right-menu li a:visited, .right-menu li a:active {
 +
    color: #000 !important;
 +
}
 +
#catlinks{
 +
display:none;
 +
}
 +
/*important for background colours*/
 +
.mediawiki{
 +
background: #ffffff;
 +
}
 +
/***End minimal header***/
-
<script type="text/javascript">
+
/*Base styles*/
-
/*
+
#content{
-
* Author:     Marco Kuiper (http://www.marcofolio.net/)
+
border: none;
-
*/
+
}
 +
h1, h2, h3, h4, #css-full, #css-mobi{
 +
font-family: Myriad Pro, Gill Sans MT, Trebuchet MS, Arial, Sans-Serif;
 +
border: 0;
 +
font-weight: 400;
 +
}
 +
p, div.thumb div div.thumbcaption{
 +
font-family: Georgia, Serif;
 +
font-size: 1.1em;
 +
font-weight: normal;
 +
color: black;
 +
margin-bottom: 10px;
 +
padding-left: 5px;
 +
}
-
// Speed of the automatic slideshow
+
#css-full, #css-mobi{
-
var slideshowSpeed = 6000;
+
position: absolute;
 +
float: right;
 +
color: black;
 +
font-size: 1.3em;
 +
top: 0px;
 +
right: 15px;
 +
display: block;
 +
padding: 10px;
 +
}
-
// Variable to store the images we need to set as background
+
#jsnotice{
-
// which also includes some text and url's.
+
background-color: #4ED92F;
-
var photos = [ {
+
}
-
"title" : "Gilman Hall",
+
-
"image" : "../../wiki/images/7/73/Hopkins.gif",
+
-
"url" : "http://www.sxc.hu/photo/1271909",
+
-
"firstline" : "",
+
-
"secondline" : ""
+
-
}, {
+
-
"title" : "Johns Hopkins Hospital",
+
-
"image" : "../../wiki/images/6/64/Hospital.gif",
+
-
"url" : "",
+
-
"firstline" : "",
+
-
"secondline" : ""
+
-
}, {
+
-
"title" : "Peabody Library",
+
-
"image" : "../../wiki/images/f/f7/Library.gif",
+
-
"url" : "",
+
-
"firstline" : "",
+
-
"secondline" : ""
+
-
}, {
+
-
"title" : "Design",
+
-
"image" : "../../wiki/images/0/0a/Design.png",
+
-
"url" : "",
+
-
"firstline" : "",
+
-
"secondline" : ""
+
-
}
+
-
];
+
 +
#table{
 +
margin: 10px;
 +
}
 +
</style>
 +
<!--desktop-->
 +
<!--<link rel='stylesheet' type='text/css' href='https://2012.igem.org/Team:Calgary/static/basicpagedesktop.css?action=raw&amp;ctype=text/css' />-->
 +
<style type="text/css">
 +
    /*======
 +
Desktop Styling
 +
Thanks a lot to the 2012 Calgary team for snippets of their code!
 +
Check out their wiki at:
 +
https://2012.igem.org/Team:Calgary
-
$(document).ready(function() {
+
======*/
-
+
 
-
// Backwards navigation
+
/***Nav styling***/
-
$("#back").click(function() {
+
header{
-
stopAnimation();
+
position: relative;
-
navigate("back");
+
top: -45px;
-
});
+
z-index: 999;
 +
}
 +
 
 +
#nav-wrap{
 +
height: 0px;
 +
margin-top: -45px;
 +
}
 +
 
 +
#nav, #nav ul{
 +
list-style: none;
 +
margin: 0;
 +
padding: 0;
 +
width: 965px;
 +
height: 100%;
 +
display: table;
-
// Forward navigation
 
-
$("#next").click(function() {
 
-
stopAnimation();
 
-
navigate("next");
 
-
});
 
-
var interval;
+
}
-
$("#control").toggle(function(){
+
-
stopAnimation();
+
-
}, function() {
+
-
// Change the background image to "pause"
+
-
$(this).css({ "background-image" : "url(images/btn_pause.png)" });
+
-
+
-
// Show the next image
+
-
navigate("next");
+
-
+
-
// Start playing the animation
+
-
interval = setInterval(function() {
+
-
navigate("next");
+
-
}, slideshowSpeed);
+
-
});
+
 +
/*To be moved to JQ block*/
 +
#menu-icon{
 +
display: none;
 +
}
 +
 +
/*menu*/
 +
#nav li{
 +
height: auto;
 +
padding: 0;
 +
list-style: none;
 +
float: left;
 +
width: auto;
 +
margin: 0;
 +
background: #333333;
 +
position: relative;
 +
}
 +
#nav > li a{
 +
padding: 0 15px;
 +
}
 +
#nav > li{
 +
background: transparent;
 +
}
-
var activeContainer = 1;
+
/*submenu*/
-
var currentImg = 0;
+
#nav li ul {
-
var animating = false;
+
position: absolute;
-
var navigate = function(direction) {
+
width: 200px;
-
// Check if no animation is running. If it is, prevent the action
+
display: none;
-
if(animating) {
+
}
-
return;
+
#nav li:hover ul {
 +
display: block;
 +
}
 +
/*sub-submenu*/
 +
#nav li ul ul{
 +
margin-left: 230px;
 +
margin-top: -15px;
 +
}
 +
#nav li:hover ul ul{
 +
display: none;
 +
}
 +
#nav li:hover ul, #nav li li:hover ul{
 +
display: block;
 +
}
 +
#nav a{
 +
display: block;
 +
font-family: Myriad Pro, Gill Sans MT, Trebuchet MS, Arial, Sans-Serif;
 +
color: white;
 +
}
 +
#nav li a{
 +
line-height: 1.4em; /*centers the text vertically*/
 +
font-size: 2em;
 +
}
 +
#nav ul li > a{
 +
width: 200px;
}
}
-
+
/*color change after rollover*/
-
// Check which current image we need to show
+
#nav li a:hover, #nav li li a.drop:hover::after{
-
if(direction == "next") {
+
display: block;
-
currentImg++;
+
text-decoration: none;
-
if(currentImg == photos.length + 1) {
+
color: #43bbff;
-
currentImg = 1;
+
}
-
}
+
#nav li ul li ul{
-
} else {
+
margin-top: -32px;
-
currentImg--;
+
position: absolute;
-
if(currentImg == 0) {
+
}
-
currentImg = photos.length;
+
/*submenu and sub-submenu*/
-
}
+
#nav li ul li ul li a, #nav li ul li a{
 +
font-size: 1.8em;
 +
}
 +
#nav li li a.drop:after{
 +
content: '>';
 +
padding-left: 20px;
 +
color: #BBB;
 +
display: inline;
 +
float: right;
}
}
-
 
-
// Check which container we need to use
 
-
var currentContainer = activeContainer;
 
-
if(activeContainer == 1) {
 
-
activeContainer = 2;
 
-
} else {
 
-
activeContainer = 1;
 
-
}
 
-
 
-
showImage(photos[currentImg - 1], currentContainer, activeContainer);
 
-
 
-
};
 
-
 
-
var currentZindex = -1;
 
-
var showImage = function(photoObject, currentContainer, activeContainer) {
 
-
animating = true;
 
-
 
-
// Make sure the new container is always on the background
 
-
currentZindex--;
 
-
 
-
// Set the background image of the new active container
 
-
$("#headerimg" + activeContainer).css({
 
-
"background-image" : "url(images/" + photoObject.image + ")",
 
-
"display" : "block",
 
-
"z-index" : currentZindex
 
-
});
 
-
 
-
// Hide the header text
 
-
$("#headertxt").css({"display" : "none"});
 
-
 
-
// Set the new header text
 
-
$("#firstline").html(photoObject.firstline);
 
-
$("#secondline")
 
-
.attr("href", photoObject.url)
 
-
.html(photoObject.secondline);
 
-
$("#pictureduri")
 
-
.attr("href", photoObject.url)
 
-
.html(photoObject.title);
 
-
 
-
 
-
// Fade out the current container
 
-
// and display the header text when animation is complete
 
-
$("#headerimg" + currentContainer).fadeOut(function() {
 
-
setTimeout(function() {
 
-
$("#headertxt").css({"display" : "block"});
 
-
animating = false;
 
-
}, 500);
 
-
});
 
-
};
 
-
 
-
var stopAnimation = function() {
 
-
// Change the background image to "play"
 
-
$("#control").css({ "background-image" : "url(images/btn_play.png)" });
 
-
 
-
// Clear the interval
 
-
clearInterval(interval);
 
-
};
 
-
 
-
// We should statically set the first image
 
-
navigate("next");
 
-
 
-
// Start playing the animation
 
-
interval = setInterval(function() {
 
-
navigate("next");
 
-
}, slideshowSpeed);
 
-
 
-
});
 
 +
/***End nav styling***/
-
</script>
+
/***Headerimage***/
 +
#headerimage{
 +
width: 968px;
 +
position: relative;
 +
margin-left: 0px;
 +
margin-bottom: 10px;
 +
top: 0px;
 +
}
 +
#css-full{
 +
display: none;
 +
}
 +
#css-mobi{
 +
display: block;
 +
top: 0px;
 +
}
 +
/***Logo styling***/
 +
#logo{
 +
position: absolute;
 +
top: 10px;
 +
right: 20px;
 +
float: right;
 +
}
 +
#logo img{
 +
width: 260px;
 +
}
 +
 +
/***Body styling***/
 +
h1{
 +
font-size: 2.3em;
 +
line-height: 1em;
 +
}
 +
h2{
 +
font-size: 1.8em;
 +
line-height: 1.2em;
 +
}
 +
h3{
 +
font-size: 1.6em;
 +
margin: 0px 15px;
 +
font-weight: bold;
 +
}
 +
h4{
 +
font-size: 1.4em;
 +
color: #333333;
 +
margin: 0px 20px;
 +
font-weight: bold;
 +
}
 +
#bodycontainer p{
 +
font-size: 1.2em;
 +
}
 +
#pagetitle{
 +
border-bottom: 2px solid black;
 +
padding-bottom: 10px;
 +
padding-left: 10px;
 +
}
 +
#bodycontainer h2{
 +
margin-left: 10px;
 +
margin-right: 10px;
 +
}
 +
#bodycontainer p{
 +
margin-left: 20px;
 +
margin-right: 10px;
 +
}
 +
#bodycontainer{
 +
margin-left: 220px;
 +
}
 +
#bodycontainer ul{
 +
margin-left: 5.0em;
 +
}
 +
#bodycontainer li{
 +
font-family: Georgia, Serif;
 +
}
 +
#sidebar{
 +
position: absolute;
 +
width: 210px;
 +
z-index: 0;
 +
}
 +
/*
 +
#sidebarimg{
 +
width: 214px;
 +
height: 144px;
 +
background: #43bbff;
 +
margin: 5px 0px;
 +
border: 3px solid #333333;
 +
}
 +
*/
 +
#sidebar #list{
 +
background: #333333;
 +
}
 +
#sidebar h2{
 +
color: white;
 +
padding: 20px 15px 0px 15px;
 +
font-size: 2.0em;
 +
}
 +
#sidebar ul{
 +
list-style: none;
 +
margin: 0px 15px;
 +
}
 +
#sidebar #list > ul{
 +
padding-bottom: 20px;
 +
}
 +
#sidebar a{
 +
color: white;
 +
font-family: Georgia, Serif;
 +
font-size: 1.4em;
 +
display: block;
 +
line-height: 1.4em;
 +
}
 +
#sidebar a:hover{
 +
text-decoration: none;
 +
color: #43BBFF;
 +
}
-
 
+
/* thumbnails */
-
 
+
div.thumb {
-
<div id="navigation"></div>
+
    margin-bottom: .5em;
-
 
+
    border-style: solid;
 +
    border-color: transparent;
 +
    width: auto;
 +
}
 +
div.thumb div {
 +
    border: 0px;
 +
    padding: 3px !important;
 +
    font-size: 94%;
 +
    text-align: center;
 +
    overflow: hidden;
 +
background: transparent;
 +
}
 +
div.thumb div a img {
 +
    border: none;
 +
}
 +
div.thumb div div.thumbcaption {
 +
    border: none;
 +
    text-align: left;
 +
    line-height: 1.4em;
 +
    padding: .3em 0 .1em 0;
 +
}
 +
div.magnify {
 +
    float: right;
 +
    border: none !important;
 +
    background: none !important;
 +
}
 +
div.magnify a, div.magnify img {
 +
    display: block;
 +
    border: none !important;
 +
    background: none !important;
 +
}
 +
div.tright {
 +
    clear: right;
 +
    float: right;
 +
    border-width: .5em 0 .8em 1.4em;
 +
}
 +
div.tleft {
 +
    float: left;
 +
    margin-right: .5em;
 +
    border-width: .5em 1.4em .8em 0;
 +
}
 +
/*colouring*/
 +
/*oranges: current page and all sidebar rollovers*/
 +
#home header #homelink, #home #sidebar #list a:hover, #home #nav li a:hover, #home #nav li a.drop:hover::after,
 +
#team header #teamlink, #team #sidebar #list a:hover, #team #nav li a:hover, #team #nav li a.drop:hover::after,
 +
#proj_hp header #projectlink, #proj_hp #sidebar #list a:hover, #proj_hp #nav li a:hover, #proj_hp #nav li a.drop:hover::after,
 +
#parts header #partslink, #parts #sidebar #list a:hover, #parts #nav li a:hover, #parts #nav li a.drop:hover::after,
 +
#notebook header #notebooklink, #notebook #sidebar #list a:hover, #notebook #nav li a:hover, #notebook #nav li a.drop:hover::after,
 +
#outreach header #outreachlink, #outreach #sidebar #list a:hover, #outreach #nav li a:hover, #outreach #nav li a.drop:hover::after,
 +
#sponsors header #sponsorslink, #sponsors #sidebar #list a:hover, #sponsors #nav li a:hover, #sponsors #nav li a.drop:hover::after{
 +
color: #F6A82D;
 +
}
 +
/*oranges: sidebar border*/
 +
#home #sidebar #list,
 +
#team #sidebar #list,
 +
#proj_hp #sidebar #list,
 +
#parts #sidebar #list,
 +
#notebook #sidebar #list,
 +
#outreach #sidebar #list,
 +
#sponsors #sidebar #list{
 +
border-left: 10px solid #F6A82D;
 +
}
 +
/*oranges: links*/
 +
#team #bodycontainer a,
 +
#proj_hp #bodycontainer a,
 +
#parts #bodycontainer a,
 +
#notebook #bodycontainer a,
 +
#outreach #bodycontainer a,
 +
#sponsors #bodycontainer a{
 +
color: #FF7A00;
 +
}
 +
#team #bodycontainer a:visited,
 +
#proj_hp #bodycontainer a:visited,
 +
#parts #bodycontainer a:visited,
 +
#notebook #bodycontainer a:visited,
 +
#outreach #bodycontainer a:visited,
 +
#sponsors #bodycontainer a:visited{
 +
color: #C40;
 +
}
 +
/*blues: current page, all rollover links in nav, all sidebar hovers and dropdown menus*/
 +
#proj_o header #projectlink, #proj_o #sidebar #list a:hover, #proj_o #nav li a:hover, #proj_o #nav li a.drop:hover::after,
 +
#note_o header #notebooklink, #note_o #sidebar #list a:hover, #note_o #nav li a:hover, #note_o #nav li a.drop:hover::after{
 +
color: #43BBFF;
 +
}
 +
/*blues: sidebar border*/
 +
#proj_o #sidebar #list,
 +
#note_o #sidebar #list{
 +
border-left: 10px solid #43BBFF;
 +
}
 +
/*blues: links*/
 +
#proj_o #bodycontainer a,
 +
#note_o #bodycontainer a{
 +
color: #1088CC;
 +
}
 +
#proj_o #bodycontainer a:visited,
 +
#note_o #bodycontainer a:visited{
 +
color: #05B;
 +
}
 +
/*greens: current page, all rollover links in nav, all sidebar hovers, and dropdown menus*/
 +
#proj_f header #projectlink, #proj_f #sidebar #list a:hover, #proj_f #nav li a:hover, #proj_f #nav li a.drop:hover::after,
 +
#note_f header #notebooklink, #note_f #sidebar #list a:hover, #note_f #nav li a:hover, #note_f #nav li a.drop:hover::after{
 +
color: #58CD45;
 +
}
 +
/*greens: sidebar border*/
 +
#proj_f #sidebar #list,
 +
#note_f #sidebar #list{
 +
border-left: 10px solid #58CD45;
 +
}
 +
/*greens: links*/
 +
#proj_f #bodycontainer a,
 +
#proj_f #bodycontainer a{
 +
color: #159900;
 +
}
 +
/*greens: links*/
 +
#proj_f #bodycontainer a:visited,
 +
#proj_f #bodycontainer a:visited{
 +
color: #06660B;
 +
}
 +
/*hub page CSS*/
 +
a.hublink{
 +
text-decoration: none;
 +
margin-left: 15px;
 +
margin-right: 15px;
 +
}
 +
div.hubbox{
 +
margin-left: 15px;
 +
}
 +
div.hubbox img{
 +
float: left;
 +
padding: 15px;
 +
}
 +
div.hubbox h2{
 +
color: white;
 +
padding: 15px 15px 0px 15px;
 +
font-size: 2.0em;
 +
margin-left: 120px !important;
 +
}
 +
div.hubbox p{
 +
color: white;
 +
padding: 0px 15px 15px 15px;
 +
margin-left: 120px !important;
 +
}
 +
div.hubbox b{
 +
font-size: 1.1em;
 +
}
 +
</style>
 +
<script type="text/javascript">
 +
    jQuery(document).ready(function ($) {
 +
        //eliminate jsnotice
 +
        $('#jsnotice').hide();
 +
        //prepend menu icon
 +
        $('#nav-wrap').prepend('<div id="menu-icon">Menu</div>');
 +
        //toggle nav
 +
        $("#menu-icon").click(function () {
 +
            $("#nav").slideToggle('fast');
 +
            $(this).toggleClass("active");
 +
        });
 +
        //hide url bar
 +
        window.scrollTo(0, 1);
 +
    });
 +
</script>
 +
<!--switching function: thanks to http://www.digital-web.com/articles/strategies_for_css_switching/-->
-
<link rel="stylesheet" href="https://2012.igem.org/Team:Johns_Hopkins-Software/Templates/cssindex?action=raw&amp;ctype=text/css" type="text/css"/>
+
<script type="text/javascript">
 +
    var _gaq = _gaq || [];
 +
    _gaq.push(['_setAccount', 'UA-32774032-1']);
 +
    _gaq.push(['_trackPageview']);
 +
    (function () {
 +
        var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
 +
        ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
 +
        var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
 +
    })();
 +
</script>
 +
</head>
 +
<body>
-
 
+
<header>
-
 
+
<!--
-
 
+
<a id="css-full" href="#default">Full View</a>
-
 
+
<a id="css-mobi" href="#mobile">Mobile View</a>
-
 
+
-->
-
 
+
<div id="headerimage"><img src="https://static.igem.org/mediawiki/2013/b/b8/Leaf1.png"></img></div>
-
 
+
    <a id="logo" href="https://2013.igem.org/Team:UCSF"><img src="https://static.igem.org/mediawiki/2013/b/be/Ucsf_sig_rgb_1.png"></img></a>
-
<div style="position: absolute; top: 490px; width: 600; left: 15% ;">
+
<div id="nav-wrap">
-
 
+
<ul id="nav">
-
 
+
<li><a href="https://2013.igem.org/Team:UCSF" id="homelink">Home</a></li>
-
ajglakjdgakldjgkaldjg
+
<li><a class="drop" id="team">Team</a>
-
 
+
-
 
+
-
</div>
+
-
 
+
-
 
+
-
</div>
+
-
</div>
+
-
<br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br>
+
-
 
+
-
 
+
-
<link rel="stylesheet" href="https://2012.igem.org/Team:Johns_Hopkins-Software/Templates/cssindex?action=raw&amp;ctype=text/css" type="text/css"/>
+
-
<div id="header_body">
+
-
<div id="header_new">
+
-
<div id="header_title">
+
-
<a href="https://2012.igem.org/Team:Johns_Hopkins-Software"><img src="https://static.igem.org/mediawiki/2012/0/09/AutogeneHeader.png" width="74.1%" alt="Autogene" style="border:none; -moz-box-shadow: 0px 0px 0px #fff;
+
-
-webkit-box-shadow: 0px 0px 0px #Fff;
+
-
box-shadow: 0px 0px 0px #fff;
+
-
/* For IE 8 */
+
-
-ms-filter: "progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff')";
+
-
/* For IE 5.5 - 7 */
+
-
filter: progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff');"></a><a href="https://2012.igem.org/Main_Page"><img src="https://static.igem.org/mediawiki/2012/2/2e/Return1.png" width="25.9%" style="border:none; -moz-box-shadow: 0px 0px 0px #fff;
+
-
-webkit-box-shadow: 0px 0px 0px #Fff;
+
-
box-shadow: 0px 0px 0px #fff;
+
-
/* For IE 8 */
+
-
-ms-filter: "progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff')";
+
-
/* For IE 5.5 - 7 */
+
-
filter: progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff');"></a>
+
-
</div>
+
-
</div>
+
-
 
+
-
<div id = "navigation_wrapper">
+
-
<div id="navigation_low">
+
-
<div id="mydroplinemenu" class="droplinebar">
+
-
<ul>
+
-
<li><a href="#">Team</a>
+
<ul>
<ul>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Team">Members</a></li>
+
                        <li><a href="https://2012.igem.org/Team:UCSF/Background">Team Background</a></li>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Attributions">Attributions</a></li>
+
<li><a href="https://2013.igem.org/Team:UCSF/Team">Members</a></li>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Sponsors">Sponsors</a></li>
+
                        <li><a herf="https://2013.igem.org/Team:UCSF/TeamAttribution">Attribution</a><li>
 +
<li><a href="https://2012.igem.org/Team:UCSF/Advisors">Advisors</a></li>
 +
                        <li><a href="https://2012.igem.org/Team:UCSF/Mentors&amp;Instructors">Mentors</a></li>
 +
                        <li><a href="https://igem.org/Team.cgi?year=2013">Profile</a></li>
 +
                        <li><a href="https://2013.igem.org/Team:UCSF/ContactUs">Contact Us</a></li>
</ul>
</ul>
-
</li>
+
</li>
-
 
+
<li><a class="drop" href="https://2013.igem.org/Team:UCSF/Project" id="projectlink">Project</a>
-
<li><a href="#">Software</a>
+
<ul>
<ul>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/theSoftware_overview">Overview</a></li>
+
<li>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/AutoPlasmid">AutoPlasmid</a></li>
+
<a class="drop" href="https://2012.igem.org/Team:Calgary/Project">Overview</a>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/AutoDesign">AutoDesign</a></li>
+
<ul>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Cloud">Cloud</a></li>
+
                                <li><a href="https://2013.igem.org/Team:UCSF/Project/Accomplish">Accomplishments</a></li>
-
                                        <li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Compatibility">Compatibility</a></li>
+
                                <li><a href="https://2013.igem.org/Team:UCSF/Project/DataPage">Data Page</a></li>
-
                                        <li><a href="http://www.ugrad.cs.jhu.edu/~eisinger/iGEM/Screencast.mov">Screencast</a></li>
+
                                <li><a href="https://2012.igem.org/Team:Calgary/Parts">Parts</a></li>
-
                                        <li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/DownloadSoftware">Download</a></li>
+
                                <li><a href="https://2013.igem.org/Team:UCSF/Safety">Safety</a></li>
 +
                                <!--<li><a href="https://2012.igem.org/Team:Calgary/Project/Post-Regionals">Post-Regionals</a></li>-->
 +
</ul>
 +
</li>
 +
<li>
 +
<a class="drop" href="https://2013.igem.org/Team:UCSF/Project/Conjugation">Conjugation</a>
 +
                            <!--
 +
<ul>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Detecting">Toxin Sensing</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Reporting">Electroreporting</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Modelling">Modelling</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Prototype">Device Prototype</a></li>
 +
</ul>
 +
                            -->
 +
</li>
 +
<li>
 +
<a class="drop" href="https://2013.igem.org/Team:UCSF/Project/Circuit">Synthetic Circuit</a>
 +
                            <!--
 +
<ul>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Decarboxylation">Decarboxylation</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/CatecholDegradation">Decatecholization</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/FluxAnalysis">Flux Analysis</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Bioreactor">Bioreactor</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Upgrading">Upgrading</a></li>
 +
<li><a style="margin:0 -1em 0 1em;"href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Desulfurization">Desulfurization</a></li>
 +
<li><a style="margin:0 -1em 0 1em;"href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Denitrogenation">Denitrogenation</a></li>
 +
</ul>
 +
                            -->
 +
</li>
 +
<li><a href="https://2013.igem.org/Team:UCSF/Project/References">References</a></li>
</ul>
</ul>
-
</li>
+
</li>
-
 
+
                <li><a class="drop" href="https://2013.igem.org/Team:UCSF/Modeling" id="Modeling">Modeling</a></li>
-
<li><a href="#">Requirements</a>
+
                <li><a class="drop" href="https://2013.igem.org/Team:UCSF/HumanPractice" id="HumanPractive">Human Practice</a></li>
 +
<li><a class="drop" href="https://2013.igem.org/Team:UCSF/Notebook" id="notebooklink">Notebook</a>
<ul>
<ul>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/MedalFulfillment">Medals</a></li>
+
<li><a href="https://2012.igem.org/Team:UCSF/Bootcamp">Bootcamp</a></li>
-
    <li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Safety">Safety</a></li>
+
                        <li><a herf="https://2013.igem.org/Team:UCSF/Notebook">Notebook</a></li>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Collaboration">Collaboration</a></li>
+
                        <li><a class="drop"> Protocols</a>
 +
<ul>
 +
                                <li><a href="https://2012.igem.org/Team:UCSF/Protocols">General Protocols</a></li>
 +
                                <li><a href="https://2012.igem.org/Team:UCSF/Protocols2">Project Protocols</a></li>
 +
</ul>
 +
                        </li>
</ul>
</ul>
-
</li>
+
</li>
-
 
+
<li><a class="drop" id="outreachlink">Gallery</a>
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/PathogenDetection">Human Practices</a>
+
<ul>
<ul>
-
+
<li><a href="https://2012.igem.org/Team:UCSF/Video">Videos</a></li>
 +
<li><a href="https://2012.igem.org/Team:UCSF/Photos">Photos</a></li>
</ul>
</ul>
-
</li>
+
</li>
-
</div>
+
<li><a href="https://2013.igem.org" target="_blank">iGEM</a></li>
-
 
+
</ul>
-
<div style = "position: absolute; top: 4px; right: 7px;"><img src = "https://static.igem.org/mediawiki/2012/f/f3/HopkinsBanner.png" style="border:none; -moz-box-shadow: 0px 0px 0px #fff;
+
-
-webkit-box-shadow: 0px 0px 0px #Fff;
+
-
box-shadow: 0px 0px 0px #fff;
+
-
/* For IE 8 */
+
-
-ms-filter: "progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff')";
+
-
/* For IE 5.5 - 7 */
+
-
filter: progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff');"></a> <a href="https://www.facebook.com/AutogeneJHU"><img src="http://www.theinternetwalloffame.com/facebook-icon.jpg" height="40px" style="border:none; -moz-box-shadow: 0px 0px 0px #fff;
+
-
-webkit-box-shadow: 0px 0px 0px #Fff;
+
-
box-shadow: 0px 0px 0px #fff;
+
-
/* For IE 8 */
+
-
-ms-filter: "progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff')";
+
-
/* For IE 5.5 - 7 */
+
-
filter: progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff');"></a></div>
+
-
 
+
-
 
+
</div>
</div>
-
</div>
+
</header>
-
</div>
+
-
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.1/jquery.min.js"></script>
 
 +
</body>
-
    <script type='text/javascript' src='http://ajax.googleapis.com/ajax/libs/jquery/1.3.2/jquery.min.js?ver=1.3.2'></script>
+
<div id="box1" align="justify">
 +
</a>
 +
<h2>ABSTRACT</h2>
 +
<p>
 +
    The human race is growing fast. The world population is projected to top 10 billion by 2050. One response to the food supply needs of an increasing world population is creating better crop yield through crop survival. Pathogens and pests can cause catastrophic crop loss. Currently there is no widely used synthetic biological mechanism to help plants fight off bacterial pathogens and pests, so the main way large-scale growers protect crops is by using pesticides. We have engineered two possible solutions to address this problem.
 +
    </p>
 +
    <p>
 +
    In our first project, we have incorporated catalytically dead CAS9 (dCAS9) in conjunction with synthetic gRNAs complementary to pathogenic bacterial genes into a plasmid that naturally conjugates into neighboring bacterial cells. The specificity of the gRNAs will potentially allow us to target specific populations of bacterial pathogens in soil while leaving positive bacterial populations unharmed.
 +
    </p>
 +
    <p>
 +
    Our second project will provide plants with a sugar-mediated synthetic circuit that boosts a plant’s natural immune system and pesticide-producing capabilities in response to different levels of sugar a plant naturally produces in response to pests. The repression capabilities of dCAS9 will be used to regulate the synthetic circuit promoters that sense high or low sugar levels, reducing metabolic strain.
 +
    </p>
 +
    <p>
 +
    </p>
 +
    <p>
 +
    </p>
 +
</div>
 +
<center>
 +
<h2>Special Thanks to our 2013 iGEM Team Sponsors!</h2>
 +
<img align="center" style="margin-bottom:0px; width: 500px; margin-top:20px; padding:2; margin-left:55px;" src="https://dl.dropbox.com/u/24404809/iGEM%202012/igem%202012%20website%20photos/Logos/2012%20Sponsors.jpg">
 +
<br><p>
 +
</p>
 +
<!--
 +
NewPP limit report
 +
Preprocessor node count: 16/1000000
 +
Post-expand include size: 124/2097152 bytes
 +
Template argument size: 0/2097152 bytes
 +
Expensive parser function count: 0/100
 +
-->
-
<script type="text/javascript">
+
<!-- Saved in parser cache with key 2013_igem_org:pcache:idhash:8502-0!1!0!!en!2!edit=0 and timestamp 20130810042328 -->
 +
<div class="printfooter">
 +
Retrieved from "<a href="https://2013.igem.org/Team:UCSF/lily">https://2013.igem.org/Team:UCSF/lily</a>"</div>
 +
<div id="catlinks"><div id='catlinks' class='catlinks catlinks-allhidden'></div></div> <!-- end content -->
 +
<div class="visualClear"></div>
 +
</div>
 +
    </div>
 +
<!-- PAGE FOOTER -- ITEMS FROM COLUMN ! HAVE BEEN MOVED HERE  -- RDR  -->
 +
<div class="visualClear"></div>
 +
    <div id='footer-box' class='noprint'>
 +
        <div id="footer">
 +
              <div id="f-poweredbyico"><a href="http://www.mediawiki.org/"><img src="/wiki/skins/common/images/poweredby_mediawiki_88x31.png" height="31" width="88" alt="Powered by MediaWiki" /></a></div>       <div id="f-copyrightico"><a href="http://creativecommons.org/licenses/by/3.0/"><img src="http://i.creativecommons.org/l/by/3.0/88x31.png" alt="Attribution 3.0 Unported" width="88" height="31" /></a></div>     <ul id="f-list">
 +
-
/*********************
+
  <!-- Recentchanges is not handles well DEBUG -->
-
//* jQuery Drop Line Menu- By Dynamic Drive: http://www.dynamicdrive.com/
+
    <li id="t-recentchanges"><a href="/Special:RecentChanges"
-
//* Last updated: May 9th, 11'
+
      title='Recent changes'>Recent changes</a></li>
-
//* Menu avaiable at DD CSS Library: http://www.dynamicdrive.com/style/
+
-
*********************/
+
-
var droplinemenu={
+
    <li id="t-whatlinkshere"><a href="/Special:WhatLinksHere/Team:UCSF/lily"
 +
      title="List of all wiki pages that link here [j]" accesskey="j">What links here</a></li>
-
/*arrowimage: {classname: 'downarrowclass', src: '', leftpadding: 5}, //customize down arrow image*/
+
                        <li id="t-recentchangeslinked"><a href="/Special:RecentChangesLinked/Team:UCSF/lily"
-
animateduration: {over: 80, out: 50}, //duration of slide in/ out animation, in milliseconds
+
                          title="Recent changes in pages linked from this page [k]" accesskey="k">Related changes</a></li>
-
buildmenu:function(menuid){
 
-
jQuery(document).ready(function($){
 
-
var $mainmenu=$("#"+menuid+">ul")
 
-
var $headers=$mainmenu.find("ul").parent()
 
-
$headers.each(function(i){
 
-
var $curobj=$(this)
 
-
var $subul=$(this).find('ul:eq(0)')
 
-
this._dimensions={h:$curobj.find('a:eq(0)').outerHeight()}
 
-
this.istopheader=$curobj.parents("ul").length==1? true : false
 
-
if (!this.istopheader)
 
-
$subul.css({left:0, top:this._dimensions.h})
 
-
var $innerheader=$curobj.children('a').eq(0)
 
-
$innerheader=($innerheader.children().eq(0).is('span'))? $innerheader.children().eq(0) : $innerheader //if header contains inner SPAN, use that
 
-
/* $innerheader.append(
 
-
'<img src="'+ droplinemenu.arrowimage.src
 
-
+'" class="' + droplinemenu.arrowimage.classname
 
-
+ '" style="border:0; padding-left: '+droplinemenu.arrowimage.leftpadding+'px" />'
 
-
)*/
 
-
$curobj.hoverIntent(
 
-
function(e){
 
-
var $targetul=$(this).children("ul:eq(0)")
 
-
if ($targetul.queue().length<=1) //if 1 or less queued animations
 
-
if (this.istopheader)
 
-
$targetul.css({left: $mainmenu.position().left, top: $mainmenu.position().top+this._dimensions.h})
 
-
if (document.all &amp;&amp; !window.XMLHttpRequest) //detect IE6 or less, fix issue with overflow
 
-
$mainmenu.find('ul').css({overflow: (this.istopheader)? 'hidden' : 'visible'})
 
-
$targetul.dequeue().slideDown(droplinemenu.animateduration.over)
 
-
},
 
-
function(e){
 
-
var $targetul=$(this).children("ul:eq(0)")
 
-
$targetul.dequeue().slideUp(droplinemenu.animateduration.out)
 
-
}
 
-
) //end hover
 
-
}) //end $headers.each()
 
-
$mainmenu.find("ul").css({display:'none', visibility:'visible', width:$mainmenu.width()})
 
-
}) //end document.ready
 
-
}
 
-
}
 
-
</text>
 
 +
                <li id="t-specialpages"><a href="/Special:SpecialPages"
 +
                  title="List of all special pages [q]" accesskey="q">Special pages</a>
 +
                </li>
 +
                <li><a href='/Special:Preferences'>My preferences</a></li>
 +
            </ul>
 +
        </div> <!-- close footer -->
 +
        <div id='footer'>
 +
    <ul id="f-list">
-
<script type="text/javascript">
+
            <li id="t-print"><a href="/wiki/index.php?title=Team:UCSF/lily&amp;printable=yes"
 +
              title="Printable version of this page [p]" accesskey="p">Printable version</a>
 +
            </li>
 +
            <li id="t-permalink"><a href="/wiki/index.php?title=Team:UCSF/lily&amp;oldid=64631"
 +
              title="Permanent link to this revision of the page">Permanent link</a>
 +
            </li>
-
var DDSPEED = 10;
 
-
var DDTIMER = 15;
 
-
// main function to handle the mouse events //
+
        <li id="privacy"><a href="/2013.igem.org:Privacy_policy" title="2013.igem.org:Privacy policy">Privacy policy</a></li>
-
function ddMenu(id,d){
+
        <li id="disclaimer"><a href="/2013.igem.org:General_disclaimer" title="2013.igem.org:General disclaimer">Disclaimers</a></li>
-
  var h = document.getElementById(id + '-ddheader');
+
    </ul>
-
  var c = document.getElementById(id + '-ddcontent');
+
</div> <!-- close footer -->
-
  clearInterval(c.timer);
+
    </div> <!-- close footer-box -->
-
  if(d == 1){
+
-
    clearTimeout(h.timer);
+
<script>if (window.runOnloadHook) runOnloadHook();</script>
-
    if(c.maxh &amp;&amp; c.maxh <= c.offsetHeight){return}
+
</div>
-
    else if(!c.maxh){
+
<!-- Served in 0.155 secs. --></body>
-
      c.style.display = 'block';
+
-
      c.style.height = 'auto';
+
-
      c.maxh = c.offsetHeight;
+
-
      c.style.height = '0px';
+
-
    }
+
-
    c.timer = setInterval(function(){ddSlide(c,1)},DDTIMER);
+
-
  }else{
+
-
    h.timer = setTimeout(function(){ddCollapse(c)},50);
+
-
  }
+
-
}
+
-
 
+
-
// collapse the menu //
+
-
function ddCollapse(c){
+
-
  c.timer = setInterval(function(){ddSlide(c,-1)},DDTIMER);
+
-
}
+
-
 
+
-
// cancel the collapse if a user rolls over the dropdown //
+
-
function cancelHide(id){
+
-
  var h = document.getElementById(id + '-ddheader');
+
-
  var c = document.getElementById(id + '-ddcontent');
+
-
  clearTimeout(h.timer);
+
-
  clearInterval(c.timer);
+
-
  if(c.offsetHeight < c.maxh){
+
-
    c.timer = setInterval(function(){ddSlide(c,1)},DDTIMER);
+
-
  }
+
-
}
+
-
 
+
-
// incrementally expand/contract the dropdown and change the opacity //
+
-
function ddSlide(c,d){
+
-
  var currh = c.offsetHeight;
+
-
  var dist;
+
-
  if(d == 1){
+
-
    dist = (Math.round((c.maxh - currh) / DDSPEED));
+
-
  }else{
+
-
    dist = (Math.round(currh / DDSPEED));
+
-
  }
+
-
  if(dist <= 1 &amp;&amp; d == 1){
+
-
    dist = 1;
+
-
  }
+
-
  c.style.height = currh + (dist * d) + 'px';
+
-
  c.style.opacity = currh / c.maxh;
+
-
  c.style.filter = 'alpha(opacity=' + (currh * 100 / c.maxh) + ')';
+
-
  if((currh < 2 &amp;&amp; d != 1) || (currh > (c.maxh - 2) &amp;&amp; d == 1)){
+
-
    clearInterval(c.timer);
+
-
  }
+
-
}
+
-
 
+
-
</script>
+
</html>
</html>

Latest revision as of 02:59, 11 August 2013

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> Team:UCSF/lily - 2013.igem.org

 

Team:UCSF/lily

From 2013.igem.org

ABSTRACT

The human race is growing fast. The world population is projected to top 10 billion by 2050. One response to the food supply needs of an increasing world population is creating better crop yield through crop survival. Pathogens and pests can cause catastrophic crop loss. Currently there is no widely used synthetic biological mechanism to help plants fight off bacterial pathogens and pests, so the main way large-scale growers protect crops is by using pesticides. We have engineered two possible solutions to address this problem.

In our first project, we have incorporated catalytically dead CAS9 (dCAS9) in conjunction with synthetic gRNAs complementary to pathogenic bacterial genes into a plasmid that naturally conjugates into neighboring bacterial cells. The specificity of the gRNAs will potentially allow us to target specific populations of bacterial pathogens in soil while leaving positive bacterial populations unharmed.

Our second project will provide plants with a sugar-mediated synthetic circuit that boosts a plant’s natural immune system and pesticide-producing capabilities in response to different levels of sugar a plant naturally produces in response to pests. The repression capabilities of dCAS9 will be used to regulate the synthetic circuit promoters that sense high or low sugar levels, reducing metabolic strain.

Special Thanks to our 2013 iGEM Team Sponsors!


Retrieved from "https://2013.igem.org/Team:UCSF/lily"

Retrieved from "http://2013.igem.org/Team:UCSF/kendall"