Team:Paris Saclay/Notebook/August/12

From 2013.igem.org

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===='''1 - Digestion of Bba_K1155000, Bba_K11'''====
 
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Abdou
 
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Clone 10,14 and 15 plamid extraction using nucleospin kit.
 
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Protocol : [[Team:Paris_Saclay/Protocols/hight copy plamid extraction|hight copy plamid extraction]]
 
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Results: concentration measured by nanodrop
 
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*clone 10: C=38ng/µl  260/280= 1.78
 
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*clone 14: C=48.5ng/µl  260/280=1.90
 
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*clone 15: C=52 ng/µl    260/280=1.78
 
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We still have to sequence plasmids in order to verify our results.
 
{{Team:Paris_Saclay/incl_fin}}
{{Team:Paris_Saclay/incl_fin}}

Revision as of 21:21, 12 August 2013

Contents

Notebook : August 12

Lab work

A - Aerobic/Anaerobic regulation system

Obtaining Pfnr_RBS-LacZ-Term in PSB1C3

1 - Digestion of Bba_K1155000, Bba_K1155007 and Bba_K1155003

Anaïs, Nadia, XiaoJing

Protocol : digestion

Used quantities :

  • Pfnr in PSB1C3 (Bba_K1155000) :
    • Buffer : 5µL
    • H2O : 38µL
    • Pfnr : 5µL
    • SpeI : 1µL
    • PstI : 1µL
  • RBS-LacZ-Term in PSB1C3 (Bba_K1155007) :
    • Buffer : 5µL
    • H2O : 23µL
    • RBS-LacZ-Term : 20µL
    • XBal : 1µL
    • PstI : 1µL
  • RBS-AmilCP-Term in PSB1C3 (Bba_K1155003) :
    • Buffer : 5µL
    • H2O : 33µL
    • RBS-AmilCP-Term : 10µL
    • XBal : 1µL
    • PstI : 1µL

2 - Electrophoresis of digestion pieces

We gonna check if the digestion was good by control the size of digestion pieces.

Psdigestion12.jpg
  • Well 1 : 6µL DNA Ladder
  • Well 2 : 5µL of digested Bba_K1155000+1µl of 6X loading dy
  • Well 3 : 5µL of digested Bba_K1155007+1µl of 6X loading dy
  • Well 4 : 5µL of digested Bba_K1155003+1µl of 6X loading dy
  • Gel : 0.8%

Expected sizes :

  • RBS_LacZ_Term : 3500 kb
  • RBS_AmilCP_Term :
  • PSB1C3 :
We can't see any band for Bba_K1155000 digestion. We just do it again and let it in the fridge over night. 

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