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Team:Washington/Protocols
From 2013.igem.org
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| - | <b><u>Cloning Protocols | + | <b><u>Cloning Protocols</u></b> |
</header> | </header> | ||
<body> | <body> | ||
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<p> | <p> | ||
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<ul> | <ul> | ||
<li><a href = "https://2013.igem.org/Team:Washington/iGEMVectors">iGEM Vector Information</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/iGEMVectors">iGEM Vector Information</a></li> | ||
<li><a href = "https://2013.igem.org/Team:Washington/General_Cloning_Strategy">General Cloning Strategy</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/General_Cloning_Strategy">General Cloning Strategy</a></li> | ||
| + | </ul> | ||
| + | <b>Workflow:</b> | ||
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| + | <ul> | ||
<li><a href = "https://2013.igem.org/Team:Washington/ISOLATION_OF_PLASMID">1) Isolation of Plasmid DNA (miniprep)</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/ISOLATION_OF_PLASMID">1) Isolation of Plasmid DNA (miniprep)</a></li> | ||
<li><a href = "https://2013.igem.org/Team:Washington/GENERAL_PCR_PROTOCOL">2) General PCR Protocol </a>(also see <a href = "https://2013.igem.org/Team:Washington/PCR_GOTAG">PCR GoTaq</a> - product (30-200ng/ ul) Check on gel PCR Purification and/or <a href = "https://2013.igem.org/Team:Washington/DPNL_DIGEST">Dpnl Digest</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/GENERAL_PCR_PROTOCOL">2) General PCR Protocol </a>(also see <a href = "https://2013.igem.org/Team:Washington/PCR_GOTAG">PCR GoTaq</a> - product (30-200ng/ ul) Check on gel PCR Purification and/or <a href = "https://2013.igem.org/Team:Washington/DPNL_DIGEST">Dpnl Digest</a></li> | ||
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<li><a href = "https://2013.igem.org/Team:Washington/HEAT_SHOCK_CHEM_TRANS">6) Heat shock/chemical competent transformation</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/HEAT_SHOCK_CHEM_TRANS">6) Heat shock/chemical competent transformation</a></li> | ||
<li><a href = "https://2013.igem.org/Team:Washington/COLONY_PCR_GREEN">7) Colony PCR with Green taq</a> Miniprep (stocks can be made from this culture - add 1ml extra)</li> | <li><a href = "https://2013.igem.org/Team:Washington/COLONY_PCR_GREEN">7) Colony PCR with Green taq</a> Miniprep (stocks can be made from this culture - add 1ml extra)</li> | ||
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<li><a href = "https://2013.igem.org/Team:Washington/MAKING_GLYCEROL_FROZEN_STOCKS">9) Making Glycerol Frozen Stocks</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/MAKING_GLYCEROL_FROZEN_STOCKS">9) Making Glycerol Frozen Stocks</a></li> | ||
</ul> | </ul> | ||
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<br> | <br> | ||
| - | <b><u>Light | + | <b><u>Light Sensing Protocols</u></b> |
<br> | <br> | ||
<p> | <p> | ||
| - | <b>Light | + | <b>Light Sensing Media:</b> |
| - | <li><a href = "https://2013.igem.org/Team:Washington/M9Salts">5X M9 Salts</a></li> | + | <ul><li><a href = "https://2013.igem.org/Team:Washington/M9Salts">5X M9 Salts</a></li> |
<li><a href = "https://2013.igem.org/Team:Washington/M9Media">M9 Media + Casamino Acid Recipe</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/M9Media">M9 Media + Casamino Acid Recipe</a></li> | ||
| - | <li><a href = "https://2013.igem.org/Team:Washington/M9Plate">M9 + Casamino Acid Plate</a></li> | + | <li><a href = "https://2013.igem.org/Team:Washington/M9Plate">M9 + Casamino Acid Plate</a></li></ul> |
| - | <b>Light Testing:</b> | + | <b>Light Testing:</b><ul> |
<li><a href = "https://2013.igem.org/Team:Washington/GeneralProtocol">General Protocol</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/GeneralProtocol">General Protocol</a></li> | ||
| - | <li><a href = "https://2013.igem.org/Team:Washington/96WellPlateAssay">96 Well Plate Assay</a></li> | + | <li><a href = "https://2013.igem.org/Team:Washington/96WellPlateAssay">96-Well Plate Assay</a></li> |
| - | <li><a href = "https://2013.igem.org/Team:Washington/60mmPetriDishAssay"> | + | <li><a href = "https://2013.igem.org/Team:Washington/60mmPetriDishAssay">60 mm Petri Dish Assay</a></li> |
| + | <li><a href = "https://2013.igem.org/Team:Washington/LightIntensityTest">Light Intensity Test</a></li> | ||
| + | <li><a href = "https://2013.igem.org/Team:Washington/BlinkingTest">Blinking Test</a></li> | ||
<li><a href = "https://2013.igem.org/Team:Washington/FluorescentAnalysisProtocol">Fluorescent Analysis Protocol</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/FluorescentAnalysisProtocol">Fluorescent Analysis Protocol</a></li> | ||
<li><a href = "https://2013.igem.org/Team:Washington/GFPExpression">GFP Expression on Agar Plates</a></li> | <li><a href = "https://2013.igem.org/Team:Washington/GFPExpression">GFP Expression on Agar Plates</a></li> | ||
| + | </ul> | ||
| + | <b>Setting Up The App:</b><ul> | ||
| + | <li><a href = "https://2013.igem.org/Team:Washington/appsetup">E.colight Setup</a></li></ul> | ||
| + | <b>App Testing:</b><ul> | ||
| + | <li><a href = "https://2013.igem.org/Team:Washington/BleedThroughTest">Bleed-Through Test</a></li> | ||
| + | </ul> | ||
</body> | </body> | ||
| - | + | <br> | |
</html> | </html> | ||
Latest revision as of 21:55, 27 September 2013
Cloning Protocols Workflow:
- 1) Isolation of Plasmid DNA (miniprep)
- 2) General PCR Protocol (also see PCR GoTaq - product (30-200ng/ ul) Check on gel PCR Purification and/or Dpnl Digest
- 3) General Digestion Protocol Check on gel PCR Purification or Heat Inactivation (check enzyme temp and time, usually 80C for 20min)
- 4) Agarose Gel Electrophoresis
- 5) General Ligation Protocol (Don’t forget background control plates) Heat Inactivation (optional - up to 10 fold increase) - 65° for 10 minutes
- 6) Heat shock/chemical competent transformation
- 7) Colony PCR with Green taq Miniprep (stocks can be made from this culture - add 1ml extra)
- 9) Making Glycerol Frozen Stocks
Light Sensing Protocols
Light Sensing Media:
Light Testing:Setting Up The App: App Testing:
- General Protocol
- 96-Well Plate Assay
- 60 mm Petri Dish Assay
- Light Intensity Test
- Blinking Test
- Fluorescent Analysis Protocol
- GFP Expression on Agar Plates
