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Team:SYSU-Software/tutorial
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Latest revision as of 12:05, 28 October 2013
Tutorial
Download instruction.pdf
Download instruction.pdf
Contents
regulation network
1. add a part to the canvas
2. choose a part and view its attributes
3. return to the page of parts list
4. shared parts
5. click to view the attributes
6. attributes of the part
7. view the regulation network
2. choose a part and view its attributes
3. return to the page of parts list
4. shared parts
5. click to view the attributes
6. attributes of the part
7. view the regulation network
1.repress
2.activate
3.bond
4.relieve bond
5.delete the part
2.activate
3.bond
4.relieve bond
5.delete the part
gene circuit
1. view the plasmid sequences
2. edit the regulation network
3. view the simulation construction in detail
4.forward/backward move the component group
5. forward/reverse the sequences of component group
6. construct a new plasmid
7. backout
8. the expression level before induced (the result is calculated by lgX)
9. regulation ratio
10.the expression level after induced (the result is calculated by lgX)
11.RBS parameters
12.k1
13.the concentration of inducer
14.promoter parameters
15. plasmid copynumber
2. edit the regulation network
3. view the simulation construction in detail
4.forward/backward move the component group
5. forward/reverse the sequences of component group
6. construct a new plasmid
7. backout
8. the expression level before induced (the result is calculated by lgX)
9. regulation ratio
10.the expression level after induced (the result is calculated by lgX)
11.RBS parameters
12.k1
13.the concentration of inducer
14.promoter parameters
15. plasmid copynumber
simulation
1.choose the wanted curve
2.Whether to join the randomness
3.Whether to join the time delay
4.choose the time to add inducer
5.back
6.save
7.click the site to choose the time to add inducer
2.Whether to join the randomness
3.Whether to join the time delay
4.choose the time to add inducer
5.back
6.save
7.click the site to choose the time to add inducer
plasmid
1.the sequences of plasmid(local)
2.part
3.the annotation of part
4.choose the assembly standards
5.download the sequences
6.save plasmid graph
7. the sequences of plasmid
8. the sequences of plasmid
2.part
3.the annotation of part
4.choose the assembly standards
5.download the sequences
6.save plasmid graph
7. the sequences of plasmid
8. the sequences of plasmid
file management
1.open
2.delete
3.share
4.unshare
5.back
2.delete
3.share
4.unshare
5.back
creat new part
1.input basic information of regulation network
2.input promoter information of moderling parameters
3. present
2.input promoter information of moderling parameters
3. present
1.add a part
2.save
2.save
1.add a part from registry
2.add a part from sequence
3.present
4.the sequence of part
5.view the constitution of part
2.add a part from sequence
3.present
4.the sequence of part
5.view the constitution of part
