Team:UCSF/kendall

From 2013.igem.org

(Difference between revisions)
 
(One intermediate revision not shown)
Line 1: Line 1:
 +
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en" dir="ltr">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en" dir="ltr">
<head>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-
<meta name="generator" content="MediaWiki 1.16.0" />
+
<meta name="generator" content="MediaWiki 1.16.5" />
-
<link rel="alternate" type="application/x-wiki" title="Edit" href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=edit" />
+
-
<link rel="edit" title="Edit" href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=edit" />
+
<link rel="shortcut icon" href="/favicon.ico" />
<link rel="shortcut icon" href="/favicon.ico" />
-
<link rel="search" type="application/opensearchdescription+xml" href="/wiki/opensearch_desc.php" title="2012.igem.org (en)" />
+
<link rel="search" type="application/opensearchdescription+xml" href="/wiki/opensearch_desc.php" title="2013.igem.org (en)" />
-
<link title="Creative Commons" type="application/rdf+xml" href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;action=creativecommons" rel="meta" />
+
<link title="Creative Commons" type="application/rdf+xml" href="/wiki/index.php?title=Team:UCSF/lily&amp;action=creativecommons" rel="meta" />
<link rel="copyright" href="http://creativecommons.org/licenses/by/3.0/" />
<link rel="copyright" href="http://creativecommons.org/licenses/by/3.0/" />
-
<link rel="alternate" type="application/atom+xml" title="2012.igem.org Atom feed" href="/wiki/index.php?title=Special:RecentChanges&amp;feed=atom" /> <title>Team:Johns Hopkins-Software - 2012.igem.org</title>
+
<link rel="alternate" type="application/atom+xml" title="2013.igem.org Atom feed" href="/wiki/index.php?title=Special:RecentChanges&amp;feed=atom" /> <title>Team:UCSF/lily - 2013.igem.org</title>
<style type="text/css" media="screen, projection">/*<![CDATA[*/
<style type="text/css" media="screen, projection">/*<![CDATA[*/
@import "/wiki/skins/common/shared.css?270";
@import "/wiki/skins/common/shared.css?270";
Line 32: Line 31:
wgVariantArticlePath=false,
wgVariantArticlePath=false,
wgActionPaths={},
wgActionPaths={},
-
wgServer="https://2012.igem.org",
+
wgServer="https://2013.igem.org",
wgCanonicalNamespace="",
wgCanonicalNamespace="",
wgCanonicalSpecialPageName=false,
wgCanonicalSpecialPageName=false,
wgNamespaceNumber=0,
wgNamespaceNumber=0,
-
wgPageName="Team:Johns_Hopkins-Software",
+
wgPageName="Team:UCSF/lily",
-
wgTitle="Team:Johns Hopkins-Software",
+
wgTitle="Team:UCSF/lily",
wgAction="view",
wgAction="view",
-
wgArticleId=264,
+
wgArticleId=8502,
wgIsArticle=true,
wgIsArticle=true,
-
wgUserName="Kfkearns",
+
wgUserName=null,
-
wgUserGroups=["*", "user", "autoconfirmed"],
+
wgUserGroups=null,
wgUserLanguage="en",
wgUserLanguage="en",
wgContentLanguage="en",
wgContentLanguage="en",
wgBreakFrames=false,
wgBreakFrames=false,
-
wgCurRevisionId=296480,
+
wgCurRevisionId=64631,
-
wgVersion="1.16.0",
+
wgVersion="1.16.5",
wgEnableAPI=true,
wgEnableAPI=true,
wgEnableWriteAPI=true,
wgEnableWriteAPI=true,
Line 53: Line 52:
wgDigitTransformTable=["", ""],
wgDigitTransformTable=["", ""],
wgMainPageTitle="Main Page",
wgMainPageTitle="Main Page",
-
wgFormattedNamespaces={"-2": "Media", "-1": "Special", "0": "", "1": "Talk", "2": "User", "3": "User talk", "4": "2012.igem.org", "5": "2012.igem.org talk", "6": "File", "7": "File talk", "8": "MediaWiki", "9": "MediaWiki talk", "10": "Template", "11": "Template talk", "12": "Help", "13": "Help talk", "14": "Category", "15": "Category talk"},
+
wgFormattedNamespaces={"-2": "Media", "-1": "Special", "0": "", "1": "Talk", "2": "User", "3": "User talk", "4": "2013.igem.org", "5": "2013.igem.org talk", "6": "File", "7": "File talk", "8": "MediaWiki", "9": "MediaWiki talk", "10": "Template", "11": "Template talk", "12": "Help", "13": "Help talk", "14": "Category", "15": "Category talk"},
-
wgNamespaceIds={"media": -2, "special": -1, "": 0, "talk": 1, "user": 2, "user_talk": 3, "2012.igem.org": 4, "2012.igem.org_talk": 5, "file": 6, "file_talk": 7, "mediawiki": 8, "mediawiki_talk": 9, "template": 10, "template_talk": 11, "help": 12, "help_talk": 13, "category": 14, "category_talk": 15, "image": 6, "image_talk": 7},
+
wgNamespaceIds={"media": -2, "special": -1, "": 0, "talk": 1, "user": 2, "user_talk": 3, "2013.igem.org": 4, "2013.igem.org_talk": 5, "file": 6, "file_talk": 7, "mediawiki": 8, "mediawiki_talk": 9, "template": 10, "template_talk": 11, "help": 12, "help_talk": 13, "category": 14, "category_talk": 15, "image": 6, "image_talk": 7},
-
wgSiteName="2012.igem.org",
+
wgSiteName="2013.igem.org",
wgCategories=[],
wgCategories=[],
-
wgMWSuggestTemplate="https://2012.igem.org/wiki/api.php?action=opensearch\x26search={searchTerms}\x26namespace={namespaces}\x26suggest",
+
wgMWSuggestTemplate="https://2013.igem.org/wiki/api.php?action=opensearch\x26search={searchTerms}\x26namespace={namespaces}\x26suggest",
-
wgDBname="2012_igem_org",
+
wgDBname="2013_igem_org",
wgSearchNamespaces=[0],
wgSearchNamespaces=[0],
wgMWSuggestMessages=["with suggestions", "no suggestions"],
wgMWSuggestMessages=["with suggestions", "no suggestions"],
wgRestrictionEdit=[],
wgRestrictionEdit=[],
-
wgRestrictionMove=[],
+
wgRestrictionMove=[];
-
wgAjaxWatch={"watchMsg": "Watch", "unwatchMsg": "Unwatch", "watchingMsg": "Watching...", "unwatchingMsg": "Unwatching...", "tooltip-ca-watchMsg": "Add this page to your watchlist", "tooltip-ca-unwatchMsg": "Remove this page from your watchlist"};
+
</script>                 
</script>                 
<script type="text/javascript" src="/wiki/skins/common/wikibits.js?270"><!-- wikibits js --></script>
<script type="text/javascript" src="/wiki/skins/common/wikibits.js?270"><!-- wikibits js --></script>
<!-- Head Scripts -->
<!-- Head Scripts -->
<script src="/wiki/skins/common/ajax.js?270"></script>
<script src="/wiki/skins/common/ajax.js?270"></script>
-
<script src="/wiki/skins/common/ajaxwatch.js?270"></script>
 
<script src="/wiki/skins/common/mwsuggest.js?270"></script>
<script src="/wiki/skins/common/mwsuggest.js?270"></script>
-
<script type="text/javascript" src="/wiki/index.php?title=-&amp;action=raw&amp;smaxage=0&amp;gen=js&amp;useskin=igem"><!-- site js --></script>
+
<script type="text/javascript" src="/wiki/index.php?title=-&amp;action=raw&amp;gen=js&amp;useskin=igem"><!-- site js --></script>
<!-- jQuery Javascript -->
<!-- jQuery Javascript -->
<script type='text/javascript'        src ='/common/jquery-latest.min.js'></script>
<script type='text/javascript'        src ='/common/jquery-latest.min.js'></script>
Line 80: Line 77:
</head>
</head>
-
<body              class="mediawiki  ltr ns-0 ns-subject page-Team_Johns_Hopkins-Software">
+
<body              class="mediawiki  ltr ns-0 ns-subject page-Team_UCSF_lily">
   <div id="globalWrapper">
   <div id="globalWrapper">
Line 87: Line 84:
    <a href="/Main_Page"
    <a href="/Main_Page"
      title="Main Page">
      title="Main Page">
-
    <img src='/wiki/skins/common/images/wiki.png'>"
+
    <img src='/wiki/skins/common/images/wiki.jpg'>"
    </a>
    </a>
</div>  <!-- end p-logo -->
</div>  <!-- end p-logo -->
Line 94: Line 91:
 +
<div id="menubar" class='left-menu noprint'>
 +
  <ul>
 +
                  <li
 +
                class='selected'       ><a href="/Team:UCSF/lily">Page              </a></li>
 +
              <li
 +
                class='new'       ><a href="/wiki/index.php?title=Talk:Team:UCSF/lily&amp;action=edit&amp;redlink=1">Discussion              </a></li>
 +
              <li
 +
                    ><a href="/wiki/index.php?title=Team:UCSF/lily&amp;action=edit">View source              </a></li>
 +
              <li
 +
                    ><a href="/wiki/index.php?title=Team:UCSF/lily&amp;action=history">History              </a></li>
 +
              <li style='color:white;cursor:default'>teams</li>
 +
  </ul>
 +
</div> <!-- end menubar (left) -->
 +
 +
<div class="right-menu noprint" id="menubar">
 +
    <ul>
 +
                <li id="pt-login"><a href="/wiki/index.php?title=Special:UserLogin&amp;returnto=Team:UCSF/lily" title="You are encouraged to log in; however, it is not mandatory [o]" accesskey="o">Log in</a></li>     </ul>
 +
</div><!-- end right menubar -->
 +
 +
<div id="search-controls" class="noprint">
 +
<form action="/Special:Search" id="searchform">
 +
<input id="searchInput" name="search" type="text" title="Search 2013.igem.org [f]" accesskey="f" value="" />
 +
<input type='submit' name="go" class="searchButton" id="searchGoButton" value="Go" title="Go to a page with this exact name if exists" />&nbsp;
 +
      <input type='submit' name="fulltext" class="searchButton" id="mw-searchButton" value="Search" title="Search the pages for this text" />
 +
</form>
 +
</div> <!-- close search controls -->
 +
    </div> <!-- close top-section-->
     <div id="content">
     <div id="content">
<a name="top" id="top"></a>
<a name="top" id="top"></a>
-
<h1 class="firstHeading">Team:Johns Hopkins-Software</h1>
+
<h1 class="firstHeading">Team:UCSF/lily</h1>
<div id="bodyContent">
<div id="bodyContent">
-
<h3 id="siteSub" class='noprint'>From 2012.igem.org</h3>
+
<h3 id="siteSub" class='noprint'>From 2013.igem.org</h3>
<div id="contentSub"></div>
<div id="contentSub"></div>
<!--
<!--
Line 104: Line 128:
<!-- start content -->
<!-- start content -->
<p>
<p>
-
</div></div></div></div></div></div></div></div></div></div></div></div>
+
<!--
 +
Currently unable to implement the CSS switching due to the stupidity of the wiki. Will work on other things instead.
 +
 
 +
New header structure
 +
-->
<head>
<head>
 +
<!--CSS styles: global-->
 +
<!--<link rel='stylesheet' type='text/css' href="https://2012.igem.org/Team:Calgary/static/basicpageglobal.css?action=raw&amp;ctype=text/css" />-->
 +
<style type="text/css">
 +
    /***
 +
Minimal header: removes the search bar and header image and readjusts font colours in the menus.
-
<!-- Remove all empty <p> tags -->
+
Thanks a lot to the 2011 Brown-Stanford, 2012 Lethbridge iGEM and 2012 Calgary teams for snippets of their code!
-
<script type="text/javascript">
+
Check out their wikis at:
-
    $(document).ready(function() {
+
https://2011.igem.org/Team:Brown-Stanford
-
        $("p").filter( function() {
+
https://2012.igem.org/Team:Lethbridge
-
            return $.trim($(this).html()) == '';
+
https://2012.igem.org/Team:Calgary
-
        }).remove()
+
***/
-
    });
+
-
</script>
+
-
<link rel="stylesheet" href="https://2012.igem.org/Team:Johns_Hopkins-Software/Templates/cssindex?action=raw&amp;ctype=text/css" type="text/css"/>
+
#content h1.firstHeading {
-
</head>
+
visibility:hidden;
-
 
+
}
-
 
+
#p-logo {
-
<div id="header_new">
+
display: none;
-
<div id="headerimgs">
+
}
-
<div id="headerimg1" class="headerimg"></div>
+
#searchform {
-
<div id="headerimg2" class="headerimg"></div>
+
     display: none;
-
</div>
+
}
-
</div>
+
-
 
+
-
<div id="back" class="btn"></div>
+
-
<div id="next" class="btn"></div>
+
-
 
+
-
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.1/jquery.min.js"></script>
+
-
 
+
-
 
+
-
 
+
-
     <script type='text/javascript' src='http://ajax.googleapis.com/ajax/libs/jquery/1.3.2/jquery.min.js?ver=1.3.2'></script>
+
-
   
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
<div id="navigation"></div>
+
 +
.left-menu {
 +
background-color: #555;
 +
}
 +
.left-menu a {
 +
    color: #000;
 +
}
 +
div#top-section{ /*the div containing the entire top bar*/
 +
height: 20px;
 +
margin-bottom: 0px !important;
 +
border: none;
 +
}
 +
#content{
 +
margin-top: 0px;
 +
}
 +
#search-controls {
 +
overflow:hidden;
 +
display:none;
 +
background: none;
 +
position: absolute;
 +
top: 170px;
 +
right: 40px;
 +
}
 +
div#header {
 +
width: 975px;
 +
text-align: left;
 +
margin-left: auto;
 +
margin-right: auto;
 +
margin-bottom: 0px !important;
 +
} 
 +
#menubar {
 +
position: absolute;
 +
background: none;
 +
color: black;
 +
}
 +
.left-menu, .right-menu{
 +
position: absolute;
 +
background: none;
 +
color: black;
 +
}
 +
.left-menu li a, .right-menu li a {
 +
color: #000 !important;
 +
}
 +
.left-menu ul li, .right-menu ul li a{
 +
background: none;
 +
color: #000 !important;
 +
}
 +
.left-menu li a:hover, .right-menu li a:hover, .right-menu li a:visited, .right-menu li a:active {
 +
    color: #000 !important;
 +
}
 +
#catlinks{
 +
display:none;
 +
}
 +
/*important for background colours*/
 +
.mediawiki{
 +
background: #ffffff;
 +
}
 +
/***End minimal header***/
 +
/*Base styles*/
 +
#content{
 +
border: none;
 +
}
 +
h1, h2, h3, h4, #css-full, #css-mobi{
 +
font-family: Myriad Pro, Gill Sans MT, Trebuchet MS, Arial, Sans-Serif;
 +
border: 0;
 +
font-weight: 400;
 +
}
 +
p, div.thumb div div.thumbcaption{
 +
font-family: Georgia, Serif;
 +
font-size: 1.1em;
 +
font-weight: normal;
 +
color: black;
 +
margin-bottom: 10px;
 +
padding-left: 5px;
 +
}
-
<link rel="stylesheet" href="https://2012.igem.org/Team:Johns_Hopkins-Software/Templates/cssindex?action=raw&amp;ctype=text/css" type="text/css"/>
+
#css-full, #css-mobi{
 +
position: absolute;
 +
float: right;
 +
color: black;
 +
font-size: 1.3em;
 +
top: 0px;
 +
right: 15px;
 +
display: block;
 +
padding: 10px;
 +
}
 +
#jsnotice{
 +
background-color: #4ED92F;
 +
}
 +
#table{
 +
margin: 10px;
 +
}
 +
</style>
 +
<!--desktop-->
 +
<!--<link rel='stylesheet' type='text/css' href='https://2012.igem.org/Team:Calgary/static/basicpagedesktop.css?action=raw&amp;ctype=text/css' />-->
 +
<style type="text/css">
 +
    /*======
 +
Desktop Styling
 +
Thanks a lot to the 2012 Calgary team for snippets of their code!
 +
Check out their wiki at:
 +
https://2012.igem.org/Team:Calgary
 +
======*/
 +
/***Nav styling***/
 +
header{
 +
position: relative;
 +
top: -45px;
 +
z-index: 999;
 +
}
 +
#nav-wrap{
 +
height: 0px;
 +
margin-top: -45px;
 +
}
 +
#nav, #nav ul{
 +
list-style: none;
 +
margin: 0;
 +
padding: 0;
 +
width: 965px;
 +
height: 100%;
 +
display: table;
 +
 +
 +
}
 +
 +
/*To be moved to JQ block*/
 +
#menu-icon{
 +
display: none;
 +
}
 +
/*menu*/
 +
#nav li{
 +
height: auto;
 +
padding: 0;
 +
list-style: none;
 +
float: left;
 +
width: auto;
 +
margin: 0;
 +
background: #333333;
 +
position: relative;
 +
}
 +
#nav > li a{
 +
padding: 0 15px;
 +
}
 +
#nav > li{
 +
background: transparent;
 +
}
 +
 +
/*submenu*/
 +
#nav li ul {
 +
position: absolute;
 +
width: 200px;
 +
display: none;
 +
}
 +
#nav li:hover ul {
 +
display: block;
 +
}
 +
/*sub-submenu*/
 +
#nav li ul ul{
 +
margin-left: 230px;
 +
margin-top: -15px;
 +
}
 +
#nav li:hover ul ul{
 +
display: none;
 +
}
 +
#nav li:hover ul, #nav li li:hover ul{
 +
display: block;
 +
}
 +
#nav a{
 +
display: block;
 +
font-family: Myriad Pro, Gill Sans MT, Trebuchet MS, Arial, Sans-Serif;
 +
color: white;
 +
}
 +
#nav li a{
 +
line-height: 1.4em; /*centers the text vertically*/
 +
font-size: 2em;
 +
}
 +
#nav ul li > a{
 +
width: 200px;
 +
}
 +
/*color change after rollover*/
 +
#nav li a:hover, #nav li li a.drop:hover::after{
 +
display: block;
 +
text-decoration: none;
 +
color: #43bbff;
 +
}
 +
#nav li ul li ul{
 +
margin-top: -32px;
 +
position: absolute;
 +
}
 +
/*submenu and sub-submenu*/
 +
#nav li ul li ul li a, #nav li ul li a{
 +
font-size: 1.8em;
 +
}
 +
#nav li li a.drop:after{
 +
content: '>';
 +
padding-left: 20px;
 +
color: #BBB;
 +
display: inline;
 +
float: right;
 +
}
 +
/***End nav styling***/
 +
/***Headerimage***/
 +
#headerimage{
 +
width: 968px;
 +
position: relative;
 +
margin-left: 0px;
 +
margin-bottom: 10px;
 +
top: 0px;
 +
}
 +
#css-full{
 +
display: none;
 +
}
 +
#css-mobi{
 +
display: block;
 +
top: 0px;
 +
}
 +
/***Logo styling***/
 +
#logo{
 +
position: absolute;
 +
top: 10px;
 +
right: 20px;
 +
float: right;
 +
}
 +
#logo img{
 +
width: 260px;
 +
}
 +
 +
/***Body styling***/
 +
h1{
 +
font-size: 2.3em;
 +
line-height: 1em;
 +
}
 +
h2{
 +
font-size: 1.8em;
 +
line-height: 1.2em;
 +
}
 +
h3{
 +
font-size: 1.6em;
 +
margin: 0px 15px;
 +
font-weight: bold;
 +
}
 +
h4{
 +
font-size: 1.4em;
 +
color: #333333;
 +
margin: 0px 20px;
 +
font-weight: bold;
 +
}
 +
#bodycontainer p{
 +
font-size: 1.2em;
 +
}
 +
#pagetitle{
 +
border-bottom: 2px solid black;
 +
padding-bottom: 10px;
 +
padding-left: 10px;
 +
}
 +
#bodycontainer h2{
 +
margin-left: 10px;
 +
margin-right: 10px;
 +
}
 +
#bodycontainer p{
 +
margin-left: 20px;
 +
margin-right: 10px;
 +
}
 +
#bodycontainer{
 +
margin-left: 220px;
 +
}
 +
#bodycontainer ul{
 +
margin-left: 5.0em;
 +
}
 +
#bodycontainer li{
 +
font-family: Georgia, Serif;
 +
}
 +
#sidebar{
 +
position: absolute;
 +
width: 210px;
 +
z-index: 0;
 +
}
 +
/*
 +
#sidebarimg{
 +
width: 214px;
 +
height: 144px;
 +
background: #43bbff;
 +
margin: 5px 0px;
 +
border: 3px solid #333333;
 +
}
 +
*/
 +
#sidebar #list{
 +
background: #333333;
 +
}
 +
#sidebar h2{
 +
color: white;
 +
padding: 20px 15px 0px 15px;
 +
font-size: 2.0em;
 +
}
 +
#sidebar ul{
 +
list-style: none;
 +
margin: 0px 15px;
 +
}
 +
#sidebar #list > ul{
 +
padding-bottom: 20px;
 +
}
 +
#sidebar a{
 +
color: white;
 +
font-family: Georgia, Serif;
 +
font-size: 1.4em;
 +
display: block;
 +
line-height: 1.4em;
 +
}
 +
#sidebar a:hover{
 +
text-decoration: none;
 +
color: #43BBFF;
 +
}
-
 
+
/* thumbnails */
-
</div>
+
div.thumb {
-
</div>
+
    margin-bottom: .5em;
-
<br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br>
+
    border-style: solid;
-
 
+
     border-color: transparent;
-
 
+
    width: auto;
-
<link rel="stylesheet" href="https://2012.igem.org/Team:Johns_Hopkins-Software/Templates/cssindex?action=raw&amp;ctype=text/css" type="text/css"/>
+
-
<div id="header_body">
+
-
<div id="header_new">
+
-
<div id="header_title">
+
-
<a href="https://2013.igem.org/Team:UCSF"><img src="https://dl.dropbox.com/u/24404809/iGEM%202012/igem%202012%20website%20photos/group%20photo%20on%20steps.jpg" width="35%" alt="Autogene" style="border:none; -moz-box-shadow: 0px 0px 0px #fff;
+
-
-webkit-box-shadow: 0px 0px 0px #Fff;
+
-
box-shadow: 0px 0px 0px #fff;
+
-
/* For IE 8 */
+
-
-ms-filter: "progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff')";
+
-
/* For IE 5.5 - 7 */
+
-
filter: progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff');"></a><a href="https://2013.igem.org/Main_Page"><img src="https://dl.dropbox.com/u/24404809/iGEM%202012/igem%202012%20website%20photos/extra/photo%20page/IMG_4513.JPG" width="25.9%" style="border:none; -moz-box-shadow: 0px 0px 0px #fff;
+
-
-webkit-box-shadow: 0px 0px 0px #Fff;
+
-
box-shadow: 0px 0px 0px #fff;
+
-
/* For IE 8 */
+
-
-ms-filter: "progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#ffffff')";
+
-
/* For IE 5.5 - 7 */
+
-
filter: progid:DXImageTransform.Microsoft.Shadow(Strength=0, Direction=135, Color='#FF9B40');"></a>
+
-
</div>
+
-
</div>
+
-
 
+
-
<div id = "navigation_wrapper">
+
-
<div id="navigation_low">
+
-
<div id="mydroplinemenu" class="droplinebar">
+
-
<ul>
+
-
<li><a href="#">Team</a>
+
-
<ul>
+
-
<li><a href="https://2013.igem.org/Team:UCSF/Team">Members</a></li>
+
-
+
-
+
-
</ul>
+
-
</li>
+
-
 
+
-
<li><a href="#">Software</a>
+
-
<ul>
+
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/theSoftware_overview">Overview</a></li>
+
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/AutoPlasmid">AutoPlasmid</a></li>
+
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/AutoDesign">AutoDesign</a></li>
+
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Cloud">Cloud</a></li>
+
-
                                        <li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Compatibility">Compatibility</a></li>
+
-
                                        <li><a href="http://www.ugrad.cs.jhu.edu/~eisinger/iGEM/Screencast.mov">Screencast</a></li>
+
-
                                        <li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/DownloadSoftware">Download</a></li>
+
-
</ul>
+
-
</li>
+
-
 
+
-
<li><a href="#">Requirements</a>
+
-
<ul>
+
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/MedalFulfillment">Medals</a></li>
+
-
    <li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Safety">Safety</a></li>
+
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/Collaboration">Collaboration</a></li>
+
-
</ul>
+
-
</li>
+
-
 
+
-
<li><a href="https://2012.igem.org/Team:Johns_Hopkins-Software/PathogenDetection">Human Practices</a>
+
-
<ul>
+
-
+
-
</ul>
+
-
</li>
+
-
</div>
+
-
 
+
-
 
+
-
 
+
-
 
+
-
 
+
-
</div>
+
-
</div>
+
-
</div>
+
-
 
+
-
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.1/jquery.min.js"></script>
+
-
 
+
-
 
+
-
 
+
-
     <script type='text/javascript' src='http://ajax.googleapis.com/ajax/libs/jquery/1.3.2/jquery.min.js?ver=1.3.2'></script>
+
-
 
+
-
 
+
-
<script type="text/javascript">
+
-
 
+
-
/*********************
+
-
//* jQuery Drop Line Menu- By Dynamic Drive: http://www.dynamicdrive.com/
+
-
//* Last updated: May 9th, 11'
+
-
//* Menu avaiable at DD CSS Library: http://www.dynamicdrive.com/style/
+
-
*********************/
+
-
 
+
-
var droplinemenu={
+
-
 
+
-
/*arrowimage: {classname: 'downarrowclass', src: '', leftpadding: 5}, //customize down arrow image*/
+
-
animateduration: {over: 80, out: 50}, //duration of slide in/ out animation, in milliseconds
+
-
 
+
-
buildmenu:function(menuid){
+
-
jQuery(document).ready(function($){
+
-
var $mainmenu=$("#"+menuid+">ul")
+
-
var $headers=$mainmenu.find("ul").parent()
+
-
$headers.each(function(i){
+
-
var $curobj=$(this)
+
-
var $subul=$(this).find('ul:eq(0)')
+
-
this._dimensions={h:$curobj.find('a:eq(0)').outerHeight()}
+
-
this.istopheader=$curobj.parents("ul").length==1? true : false
+
-
if (!this.istopheader)
+
-
$subul.css({left:0, top:this._dimensions.h})
+
-
var $innerheader=$curobj.children('a').eq(0)
+
-
$innerheader=($innerheader.children().eq(0).is('span'))? $innerheader.children().eq(0) : $innerheader //if header contains inner SPAN, use that
+
-
/* $innerheader.append(
+
-
'<img src="'+ droplinemenu.arrowimage.src
+
-
+'" class="' + droplinemenu.arrowimage.classname
+
-
+ '" style="border:0; padding-left: '+droplinemenu.arrowimage.leftpadding+'px" />'
+
-
)*/
+
-
$curobj.hoverIntent(
+
-
function(e){
+
-
var $targetul=$(this).children("ul:eq(0)")
+
-
if ($targetul.queue().length<=1) //if 1 or less queued animations
+
-
if (this.istopheader)
+
-
$targetul.css({left: $mainmenu.position().left, top: $mainmenu.position().top+this._dimensions.h})
+
-
if (document.all &amp;&amp; !window.XMLHttpRequest) //detect IE6 or less, fix issue with overflow
+
-
$mainmenu.find('ul').css({overflow: (this.istopheader)? 'hidden' : 'visible'})
+
-
$targetul.dequeue().slideDown(droplinemenu.animateduration.over)
+
-
},
+
-
function(e){
+
-
var $targetul=$(this).children("ul:eq(0)")
+
-
$targetul.dequeue().slideUp(droplinemenu.animateduration.out)
+
-
}
+
-
) //end hover
+
-
}) //end $headers.each()
+
-
$mainmenu.find("ul").css({display:'none', visibility:'visible', width:$mainmenu.width()})
+
-
}) //end document.ready
+
}
}
 +
div.thumb div {
 +
    border: 0px;
 +
    padding: 3px !important;
 +
    font-size: 94%;
 +
    text-align: center;
 +
    overflow: hidden;
 +
background: transparent;
}
}
-
 
+
div.thumb div a img {
-
</text>
+
    border: none;
-
 
+
}
-
 
+
div.thumb div div.thumbcaption {
-
<script type="text/javascript">
+
    border: none;
-
 
+
    text-align: left;
-
 
+
    line-height: 1.4em;
-
var DDSPEED = 10;
+
    padding: .3em 0 .1em 0;
-
var DDTIMER = 15;
+
-
 
+
}
-
// main function to handle the mouse events //
+
div.magnify {
-
function ddMenu(id,d){
+
     float: right;
-
  var h = document.getElementById(id + '-ddheader');
+
     border: none !important;
-
  var c = document.getElementById(id + '-ddcontent');
+
     background: none !important;
-
  clearInterval(c.timer);
+
}
-
  if(d == 1){
+
div.magnify a, div.magnify img {
-
     clearTimeout(h.timer);
+
    display: block;
-
     if(c.maxh &amp;&amp; c.maxh <= c.offsetHeight){return}
+
    border: none !important;
-
     else if(!c.maxh){
+
    background: none !important;
-
      c.style.display = 'block';
+
}
-
      c.style.height = 'auto';
+
div.tright {
-
      c.maxh = c.offsetHeight;
+
    clear: right;
-
      c.style.height = '0px';
+
     float: right;
-
     }
+
     border-width: .5em 0 .8em 1.4em;
-
     c.timer = setInterval(function(){ddSlide(c,1)},DDTIMER);
+
}
-
  }else{
+
div.tleft {
-
     h.timer = setTimeout(function(){ddCollapse(c)},50);
+
     float: left;
-
  }
+
    margin-right: .5em;
 +
    border-width: .5em 1.4em .8em 0;
}
}
-
// collapse the menu //
+
/*colouring*/
-
function ddCollapse(c){
+
/*oranges: current page and all sidebar rollovers*/
-
  c.timer = setInterval(function(){ddSlide(c,-1)},DDTIMER);
+
#home header #homelink, #home #sidebar #list a:hover, #home #nav li a:hover, #home #nav li a.drop:hover::after,
 +
#team header #teamlink, #team #sidebar #list a:hover, #team #nav li a:hover, #team #nav li a.drop:hover::after,
 +
#proj_hp header #projectlink, #proj_hp #sidebar #list a:hover, #proj_hp #nav li a:hover, #proj_hp #nav li a.drop:hover::after,
 +
#parts header #partslink, #parts #sidebar #list a:hover, #parts #nav li a:hover, #parts #nav li a.drop:hover::after,
 +
#notebook header #notebooklink, #notebook #sidebar #list a:hover, #notebook #nav li a:hover, #notebook #nav li a.drop:hover::after,
 +
#outreach header #outreachlink, #outreach #sidebar #list a:hover, #outreach #nav li a:hover, #outreach #nav li a.drop:hover::after,
 +
#sponsors header #sponsorslink, #sponsors #sidebar #list a:hover, #sponsors #nav li a:hover, #sponsors #nav li a.drop:hover::after{
 +
color: #F6A82D;
 +
}
 +
/*oranges: sidebar border*/
 +
#home #sidebar #list,
 +
#team #sidebar #list,
 +
#proj_hp #sidebar #list,
 +
#parts #sidebar #list,
 +
#notebook #sidebar #list,
 +
#outreach #sidebar #list,
 +
#sponsors #sidebar #list{
 +
border-left: 10px solid #F6A82D;
 +
}
 +
/*oranges: links*/
 +
#team #bodycontainer a,
 +
#proj_hp #bodycontainer a,
 +
#parts #bodycontainer a,
 +
#notebook #bodycontainer a,
 +
#outreach #bodycontainer a,
 +
#sponsors #bodycontainer a{
 +
color: #FF7A00;
 +
}
 +
#team #bodycontainer a:visited,
 +
#proj_hp #bodycontainer a:visited,
 +
#parts #bodycontainer a:visited,
 +
#notebook #bodycontainer a:visited,
 +
#outreach #bodycontainer a:visited,
 +
#sponsors #bodycontainer a:visited{
 +
color: #C40;
}
}
-
// cancel the collapse if a user rolls over the dropdown //
+
/*blues: current page, all rollover links in nav, all sidebar hovers and dropdown menus*/
-
function cancelHide(id){
+
#proj_o header #projectlink, #proj_o #sidebar #list a:hover, #proj_o #nav li a:hover, #proj_o #nav li a.drop:hover::after,
-
  var h = document.getElementById(id + '-ddheader');
+
#note_o header #notebooklink, #note_o #sidebar #list a:hover, #note_o #nav li a:hover, #note_o #nav li a.drop:hover::after{
-
  var c = document.getElementById(id + '-ddcontent');
+
color: #43BBFF;
-
  clearTimeout(h.timer);
+
}
-
  clearInterval(c.timer);
+
/*blues: sidebar border*/
-
  if(c.offsetHeight < c.maxh){
+
#proj_o #sidebar #list,
-
    c.timer = setInterval(function(){ddSlide(c,1)},DDTIMER);
+
#note_o #sidebar #list{
-
  }
+
border-left: 10px solid #43BBFF;
 +
}
 +
/*blues: links*/
 +
#proj_o #bodycontainer a,
 +
#note_o #bodycontainer a{
 +
color: #1088CC;
 +
}
 +
#proj_o #bodycontainer a:visited,
 +
#note_o #bodycontainer a:visited{
 +
color: #05B;
}
}
-
// incrementally expand/contract the dropdown and change the opacity //
+
/*greens: current page, all rollover links in nav, all sidebar hovers, and dropdown menus*/
-
function ddSlide(c,d){
+
#proj_f header #projectlink, #proj_f #sidebar #list a:hover, #proj_f #nav li a:hover, #proj_f #nav li a.drop:hover::after,  
-
  var currh = c.offsetHeight;
+
#note_f header #notebooklink, #note_f #sidebar #list a:hover, #note_f #nav li a:hover, #note_f #nav li a.drop:hover::after{
-
  var dist;
+
color: #58CD45;
-
  if(d == 1){
+
}
-
    dist = (Math.round((c.maxh - currh) / DDSPEED));
+
/*greens: sidebar border*/
-
  }else{
+
#proj_f #sidebar #list,
-
    dist = (Math.round(currh / DDSPEED));
+
#note_f #sidebar #list{
-
  }
+
border-left: 10px solid #58CD45;
-
  if(dist <= 1 &amp;&amp; d == 1){
+
}
-
    dist = 1;
+
/*greens: links*/
-
  }
+
#proj_f #bodycontainer a,
-
  c.style.height = currh + (dist * d) + 'px';
+
#proj_f #bodycontainer a{
-
  c.style.opacity = currh / c.maxh;
+
color: #159900;
-
  c.style.filter = 'alpha(opacity=' + (currh * 100 / c.maxh) + ')';
+
}
-
  if((currh < 2 &amp;&amp; d != 1) || (currh > (c.maxh - 2) &amp;&amp; d == 1)){
+
/*greens: links*/
-
    clearInterval(c.timer);
+
#proj_f #bodycontainer a:visited,
-
  }
+
#proj_f #bodycontainer a:visited{
 +
color: #06660B;
}
}
-
</script>
+
/*hub page CSS*/
-
 
+
a.hublink{
 +
text-decoration: none;
 +
margin-left: 15px;
 +
margin-right: 15px;
 +
}
 +
div.hubbox{
 +
margin-left: 15px;
 +
}
 +
div.hubbox img{
 +
float: left;
 +
padding: 15px;
 +
}
 +
div.hubbox h2{
 +
color: white;
 +
padding: 15px 15px 0px 15px;
 +
font-size: 2.0em;
 +
margin-left: 120px !important;
 +
}
 +
div.hubbox p{
 +
color: white;
 +
padding: 0px 15px 15px 15px;
 +
margin-left: 120px !important;
 +
}
 +
div.hubbox b{
 +
font-size: 1.1em;
 +
}
 +
</style>
<script type="text/javascript">
<script type="text/javascript">
-
/**
 
-
* jQuery Opacity Rollover plugin
 
-
*
 
-
* Copyright (c) 2009 Trent Foley (http://trentacular.com)
 
-
* Licensed under the MIT License:
 
-
*  http://www.opensource.org/licenses/mit-license.php
 
-
*/
 
-
;(function($) {
 
-
var defaults = {
 
-
mouseOutOpacity:  0.67,
 
-
mouseOverOpacity:  1.0,
 
-
fadeSpeed:        'fast',
 
-
exemptionSelector: '.selected'
 
-
};
 
-
$.fn.opacityrollover = function(settings) {
+
    jQuery(document).ready(function ($) {
-
// Initialize the effect
+
-
$.extend(this, defaults, settings);
+
-
var config = this;
+
        //eliminate jsnotice
 +
        $('#jsnotice').hide();
-
function fadeTo(element, opacity) {
+
        //prepend menu icon
-
var $target = $(element);
+
        $('#nav-wrap').prepend('<div id="menu-icon">Menu</div>');
-
+
-
if (config.exemptionSelector)
+
-
$target = $target.not(config.exemptionSelector);
+
-
+
-
$target.fadeTo(config.fadeSpeed, opacity);
+
-
}
+
-
this.css('opacity', this.mouseOutOpacity)
+
        //toggle nav
-
.hover(
+
        $("#menu-icon").click(function () {
-
function () {
+
            $("#nav").slideToggle('fast');
-
fadeTo(this, config.mouseOverOpacity);
+
            $(this).toggleClass("active");
-
},
+
-
function () {
+
-
fadeTo(this, config.mouseOutOpacity);
+
-
});
+
-
return this;
+
        });
-
};
+
-
})(jQuery);
+
-
</script>
+
        //hide url bar
 +
        window.scrollTo(0, 1);
-
<script type="text/javascript">
 
-
$(function() {
 
-
    var offset = $("#navigation_low").offset();
 
-
    var topPadding = 0;
 
-
 
-
    $(window).scroll(function() {
 
-
   
 
-
        if ($(window).scrollTop() > offset.top) {
 
-
       
 
-
            $("#navigation_low").stop().animate({
 
-
           
 
-
                marginTop: $(window).scrollTop() - offset.top + topPadding
 
-
           
 
-
            });
 
-
       
 
-
        } else {
 
-
       
 
-
            $("#navigation_low").stop().animate({
 
-
           
 
-
                marginTop: 0
 
-
           
 
-
            });
 
-
       
 
-
        }
 
-
       
 
-
           
 
     });
     });
-
 
-
});
 
-
 
</script>
</script>
 +
<!--switching function: thanks to http://www.digital-web.com/articles/strategies_for_css_switching/-->
-
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4/jquery.min.js"></script>
 
<script type="text/javascript">
<script type="text/javascript">
-
//build menu with DIV ID="myslidemenu" on page:
 
-
droplinemenu.buildmenu("mydroplinemenu")
 
-
//Nivoslider
+
    var _gaq = _gaq || [];
-
     $(window).load(function() {
+
     _gaq.push(['_setAccount', 'UA-32774032-1']);
-
        $('#slider').nivoSlider({
+
     _gaq.push(['_trackPageview']);
-
effect:'fade',
+
-
pauseOnHover:true
+
-
});
+
-
     });
+
-
//Profile script from http://www.willmaster.com/library/web-development/replace-div-content.php
+
    (function () {
-
function ReplaceContentInContainer(id,content) {
+
        var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
-
var container = document.getElementById(id);
+
        ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
-
container.innerHTML = content;
+
        var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
-
}
+
    })();
</script>
</script>
 +
</head>
 +
<body>
-
<script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.4/jquery.min.js"></script>
+
<header>
-
<script src="https://2011.igem.org/Team:Johns_Hopkins/Templates/droplinemenu?action=raw&amp;ctype=text/javascript" type="text/javascript"></script>
+
<!--
-
<script type="text/javascript" src="https://2011.igem.org/Team:Johns_Hopkins/Templates/nivosliderpack?action=raw&amp;ctype=text/javascript"></script>
+
<a id="css-full" href="#default">Full View</a>
-
<script type="text/javascript" src="https://2011.igem.org/Team:Johns_Hopkins/Templates/hoverintent?action=raw&amp;ctype=text/javascript"></script>
+
<a id="css-mobi" href="#mobile">Mobile View</a>
-
<script type="text/javascript" src="https://2011.igem.org/Team:Johns_Hopkins/Templates/galleriffic?action=raw&amp;ctype=text/javascript"></script>
+
-->
-
<script type="text/javascript" src="https://2011.igem.org/Team:Johns_Hopkins/Templates/js/opacityrollover?action=raw&amp;ctype=text/javascript"></script>
+
<div id="headerimage"><img src="https://static.igem.org/mediawiki/2013/b/b8/Leaf1.png"></img></div>
-
<script type="text/javascript" src="https://2011.igem.org/Team:Johns_Hopkins/Templates/js/jqueryhistory?action=raw&amp;ctype=text/javascript"></script>
+
    <a id="logo" href="https://2013.igem.org/Team:UCSF"><img src="https://static.igem.org/mediawiki/2013/b/be/Ucsf_sig_rgb_1.png"></img></a>
-
<script type="text/javascript" src="https://2011.igem.org/Team:Johns_Hopkins/Templates/js/profile?action=raw&amp;ctype=text/javascript"></script>
+
<div id="nav-wrap">
-
<script type="text/javascript"
+
<ul id="nav">
-
  src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML">
+
<li><a href="https://2013.igem.org/Team:UCSF" id="homelink">Home</a></li>
-
</script>
+
<li><a class="drop" id="team">Team</a>
-
<script type="text/javascript">
+
<ul>
-
//build menu with DIV ID="myslidemenu" on page:
+
                        <li><a href="https://2012.igem.org/Team:UCSF/Background">Team Background</a></li>
-
droplinemenu.buildmenu("mydroplinemenu")
+
<li><a href="https://2013.igem.org/Team:UCSF/Team">Members</a></li>
 +
                        <li><a herf="https://2013.igem.org/Team:UCSF/TeamAttribution">Attribution</a><li>
 +
<li><a href="https://2012.igem.org/Team:UCSF/Advisors">Advisors</a></li>
 +
                        <li><a href="https://2012.igem.org/Team:UCSF/Mentors&amp;Instructors">Mentors</a></li>
 +
                        <li><a href="https://igem.org/Team.cgi?year=2013">Profile</a></li>
 +
                        <li><a href="https://2013.igem.org/Team:UCSF/ContactUs">Contact Us</a></li>
 +
</ul>
 +
</li>
 +
<li><a class="drop" href="https://2013.igem.org/Team:UCSF/Project" id="projectlink">Project</a>
 +
<ul>
 +
<li>
 +
<a class="drop" href="https://2012.igem.org/Team:Calgary/Project">Overview</a>
 +
<ul>
 +
                                <li><a href="https://2013.igem.org/Team:UCSF/Project/Accomplish">Accomplishments</a></li>
 +
                                <li><a href="https://2013.igem.org/Team:UCSF/Project/DataPage">Data Page</a></li>
 +
                                <li><a href="https://2012.igem.org/Team:Calgary/Parts">Parts</a></li>
 +
                                <li><a href="https://2013.igem.org/Team:UCSF/Safety">Safety</a></li>
 +
                                <!--<li><a href="https://2012.igem.org/Team:Calgary/Project/Post-Regionals">Post-Regionals</a></li>-->
 +
</ul>
 +
</li>
 +
<li>
 +
<a class="drop" href="https://2013.igem.org/Team:UCSF/Project/Conjugation">Conjugation</a>
 +
                            <!--
 +
<ul>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Detecting">Toxin Sensing</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Reporting">Electroreporting</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Modelling">Modelling</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/FRED/Prototype">Device Prototype</a></li>
 +
</ul>
 +
                            -->
 +
</li>
 +
<li>
 +
<a class="drop" href="https://2013.igem.org/Team:UCSF/Project/Circuit">Synthetic Circuit</a>
 +
                            <!--
 +
<ul>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Decarboxylation">Decarboxylation</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/CatecholDegradation">Decatecholization</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/FluxAnalysis">Flux Analysis</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Bioreactor">Bioreactor</a></li>
 +
<li><a href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Upgrading">Upgrading</a></li>
 +
<li><a style="margin:0 -1em 0 1em;"href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Desulfurization">Desulfurization</a></li>
 +
<li><a style="margin:0 -1em 0 1em;"href="https://2012.igem.org/Team:Calgary/Project/OSCAR/Denitrogenation">Denitrogenation</a></li>
 +
</ul>
 +
                            -->
 +
</li>
 +
<li><a href="https://2013.igem.org/Team:UCSF/Project/References">References</a></li>
 +
</ul>
 +
</li>
 +
                <li><a class="drop" href="https://2013.igem.org/Team:UCSF/Modeling" id="Modeling">Modeling</a></li>
 +
                <li><a class="drop" href="https://2013.igem.org/Team:UCSF/HumanPractice" id="HumanPractive">Human Practice</a></li>
 +
<li><a class="drop" href="https://2013.igem.org/Team:UCSF/Notebook" id="notebooklink">Notebook</a>
 +
<ul>
 +
<li><a href="https://2012.igem.org/Team:UCSF/Bootcamp">Bootcamp</a></li>
 +
                        <li><a herf="https://2013.igem.org/Team:UCSF/Notebook">Notebook</a></li>
 +
                        <li><a class="drop"> Protocols</a>
 +
<ul>
 +
                                <li><a href="https://2012.igem.org/Team:UCSF/Protocols">General Protocols</a></li>
 +
                                <li><a href="https://2012.igem.org/Team:UCSF/Protocols2">Project Protocols</a></li>
 +
</ul>
 +
                        </li>
 +
</ul>
 +
</li>
 +
<li><a class="drop" id="outreachlink">Gallery</a>
 +
<ul>
 +
<li><a href="https://2012.igem.org/Team:UCSF/Video">Videos</a></li>
 +
<li><a href="https://2012.igem.org/Team:UCSF/Photos">Photos</a></li>
 +
</ul>
 +
</li>
 +
<li><a href="https://2013.igem.org" target="_blank">iGEM</a></li>
 +
</ul>
-
//Nivoslider
+
</div>
-
    $(window).load(function() {
+
</header>
-
        $('#slider').nivoSlider({
+
-
effect:'fade',
+
-
pauseOnHover:true
+
-
});
+
-
    });
+
-
//Profile script from http://www.willmaster.com/library/web-development/replace-div-content.php
 
-
function ReplaceContentInContainer(id,content) {
 
-
var container = document.getElementById(id);
 
-
container.innerHTML = content;
 
-
}
 
-
</script>
+
</body>
 +
 
 +
 
 +
<div id="box1" align="justify">
 +
</a>
 +
<h2>ABSTRACT</h2>
 +
<p>
 +
    The human race is growing fast. The world population is projected to top 10 billion by 2050. One response to the food supply needs of an increasing world population is creating better crop yield through crop survival. Pathogens and pests can cause catastrophic crop loss. Currently there is no widely used synthetic biological mechanism to help plants fight off bacterial pathogens and pests, so the main way large-scale growers protect crops is by using pesticides. We have engineered two possible solutions to address this problem.
 +
    </p>
 +
    <p>
 +
    In our first project, we have incorporated catalytically dead CAS9 (dCAS9) in conjunction with synthetic gRNAs complementary to pathogenic bacterial genes into a plasmid that naturally conjugates into neighboring bacterial cells. The specificity of the gRNAs will potentially allow us to target specific populations of bacterial pathogens in soil while leaving positive bacterial populations unharmed.
 +
    </p>
 +
    <p>
 +
    Our second project will provide plants with a sugar-mediated synthetic circuit that boosts a plant’s natural immune system and pesticide-producing capabilities in response to different levels of sugar a plant naturally produces in response to pests. The repression capabilities of dCAS9 will be used to regulate the synthetic circuit promoters that sense high or low sugar levels, reducing metabolic strain.
 +
    </p>
 +
    <p>
 +
    </p>
 +
    <p>
 +
    </p>
 +
</div>
 +
<center>
 +
<h2>Special Thanks to our 2013 iGEM Team Sponsors!</h2>
 +
<img align="center" style="margin-bottom:0px; width: 500px; margin-top:20px; padding:2; margin-left:55px;" src="https://dl.dropbox.com/u/24404809/iGEM%202012/igem%202012%20website%20photos/Logos/2012%20Sponsors.jpg">
 +
<br><p>
</p>
</p>
<!--  
<!--  
NewPP limit report
NewPP limit report
-
Preprocessor node count: 14/1000000
+
Preprocessor node count: 16/1000000
-
Post-expand include size: 82/2097152 bytes
+
Post-expand include size: 124/2097152 bytes
Template argument size: 0/2097152 bytes
Template argument size: 0/2097152 bytes
Expensive parser function count: 0/100
Expensive parser function count: 0/100
-->
-->
-
<!-- Saved in parser cache with key 2012_igem_org:pcache:idhash:264-0!1!0!!en!2 and timestamp 20130807183556 -->
+
<!-- Saved in parser cache with key 2013_igem_org:pcache:idhash:8502-0!1!0!!en!2!edit=0 and timestamp 20130810042328 -->
<div class="printfooter">
<div class="printfooter">
-
Retrieved from "<a href="https://2012.igem.org/Team:Johns_Hopkins-Software">https://2012.igem.org/Team:Johns_Hopkins-Software</a>"</div>
+
Retrieved from "<a href="https://2013.igem.org/Team:UCSF/lily">https://2013.igem.org/Team:UCSF/lily</a>"</div>
<div id="catlinks"><div id='catlinks' class='catlinks catlinks-allhidden'></div></div> <!-- end content -->
<div id="catlinks"><div id='catlinks' class='catlinks catlinks-allhidden'></div></div> <!-- end content -->
<div class="visualClear"></div>
<div class="visualClear"></div>
Line 543: Line 839:
      title='Recent changes'>Recent changes</a></li>
      title='Recent changes'>Recent changes</a></li>
-
    <li id="t-whatlinkshere"><a href="/Special:WhatLinksHere/Team:Johns_Hopkins-Software"
+
    <li id="t-whatlinkshere"><a href="/Special:WhatLinksHere/Team:UCSF/lily"
      title="List of all wiki pages that link here [j]" accesskey="j">What links here</a></li>
      title="List of all wiki pages that link here [j]" accesskey="j">What links here</a></li>
-
                         <li id="t-recentchangeslinked"><a href="/Special:RecentChangesLinked/Team:Johns_Hopkins-Software"
+
                         <li id="t-recentchangeslinked"><a href="/Special:RecentChangesLinked/Team:UCSF/lily"
                           title="Recent changes in pages linked from this page [k]" accesskey="k">Related changes</a></li>
                           title="Recent changes in pages linked from this page [k]" accesskey="k">Related changes</a></li>
-
                <li id="t-upload"><a href="/Special:Upload"
 
-
                  title="Upload files [u]" accesskey="u">Upload file</a>
 
-
                </li>
 
                <li id="t-specialpages"><a href="/Special:SpecialPages"
                <li id="t-specialpages"><a href="/Special:SpecialPages"
                  title="List of all special pages [q]" accesskey="q">Special pages</a>
                  title="List of all special pages [q]" accesskey="q">Special pages</a>
Line 563: Line 856:
    <ul id="f-list">
    <ul id="f-list">
-
            <li id="t-print"><a href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;printable=yes"
+
            <li id="t-print"><a href="/wiki/index.php?title=Team:UCSF/lily&amp;printable=yes"
              title="Printable version of this page [p]" accesskey="p">Printable version</a>
              title="Printable version of this page [p]" accesskey="p">Printable version</a>
            </li>
            </li>
-
            <li id="t-permalink"><a href="/wiki/index.php?title=Team:Johns_Hopkins-Software&amp;oldid=296480"
+
            <li id="t-permalink"><a href="/wiki/index.php?title=Team:UCSF/lily&amp;oldid=64631"
              title="Permanent link to this revision of the page">Permanent link</a>
              title="Permanent link to this revision of the page">Permanent link</a>
            </li>
            </li>
-
          <li id="privacy"><a href="/2012.igem.org:Privacy_policy" title="2012.igem.org:Privacy policy">Privacy policy</a></li>
+
          <li id="privacy"><a href="/2013.igem.org:Privacy_policy" title="2013.igem.org:Privacy policy">Privacy policy</a></li>
-
        <li id="disclaimer"><a href="/2012.igem.org:General_disclaimer" title="2012.igem.org:General disclaimer">Disclaimers</a></li>
+
        <li id="disclaimer"><a href="/2013.igem.org:General_disclaimer" title="2013.igem.org:General disclaimer">Disclaimers</a></li>
    </ul>
    </ul>
</div> <!-- close footer -->
</div> <!-- close footer -->
Line 580: Line 873:
<script>if (window.runOnloadHook) runOnloadHook();</script>
<script>if (window.runOnloadHook) runOnloadHook();</script>
</div>
</div>
-
<!-- Served in 0.212 secs. --></body>
+
<!-- Served in 0.155 secs. --></body>
</html>
</html>

Latest revision as of 02:59, 11 August 2013

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> Team:UCSF/lily - 2013.igem.org

 

Team:UCSF/lily

From 2013.igem.org

ABSTRACT

The human race is growing fast. The world population is projected to top 10 billion by 2050. One response to the food supply needs of an increasing world population is creating better crop yield through crop survival. Pathogens and pests can cause catastrophic crop loss. Currently there is no widely used synthetic biological mechanism to help plants fight off bacterial pathogens and pests, so the main way large-scale growers protect crops is by using pesticides. We have engineered two possible solutions to address this problem.

In our first project, we have incorporated catalytically dead CAS9 (dCAS9) in conjunction with synthetic gRNAs complementary to pathogenic bacterial genes into a plasmid that naturally conjugates into neighboring bacterial cells. The specificity of the gRNAs will potentially allow us to target specific populations of bacterial pathogens in soil while leaving positive bacterial populations unharmed.

Our second project will provide plants with a sugar-mediated synthetic circuit that boosts a plant’s natural immune system and pesticide-producing capabilities in response to different levels of sugar a plant naturally produces in response to pests. The repression capabilities of dCAS9 will be used to regulate the synthetic circuit promoters that sense high or low sugar levels, reducing metabolic strain.

Special Thanks to our 2013 iGEM Team Sponsors!


Retrieved from "https://2013.igem.org/Team:UCSF/lily"

Retrieved from "http://2013.igem.org/Team:UCSF/kendall"