Team:DTU-Denmark/Notebook/25 August 2013

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==Main purpose==
==Main purpose==
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==Who was in the lab==
==Who was in the lab==

Revision as of 17:59, 28 September 2013

25 August 2013

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Contents

Lab 208


Main purpose


  • PCR

Who was in the lab


Procedure


Colony PCR

Performed colony PCR to confirm insert for HAO, AMO, cycAX and Nir transformants. Used Q5 premix with the following reaction mix:

compound amount
Q5 mix 25 uL
FW primer 3 uL
RV primer 3 uL
template 1 uL
MilliQ 18 uL

Template was made by resuspending 1 culture in 100uL MilliQ.

program:

temperature time cycles
98C 10:00 -
98C 0:10 36
annealing temperature 0:30 36
72C 0:20 36
72C 5:00 -
10C hold -

details (primers, temp, expected fragment length):

  • cycAX - FW_1, RV_2, 61C, 749bp
  • HAO - FW_2, RV_3, 64C, 751bp
  • AMO - FW_2, RV_3, 63C, 750bp
  • Nir - FW_2, RV_3, 64C, 733bp
  • Nir - FW_5, RV_6, 71C, 737bp

Results


Conclusion


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