Team:DTU-Denmark/Notebook/25 August 2013
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Revision as of 17:59, 28 September 2013
25 August 2013
Contents |
Lab 208
Main purpose
- PCR
Who was in the lab
Procedure
Colony PCR
Performed colony PCR to confirm insert for HAO, AMO, cycAX and Nir transformants. Used Q5 premix with the following reaction mix:
compound | amount |
---|---|
Q5 mix | 25 uL |
FW primer | 3 uL |
RV primer | 3 uL |
template | 1 uL |
MilliQ | 18 uL |
Template was made by resuspending 1 culture in 100uL MilliQ.
program:
temperature | time | cycles |
---|---|---|
98C | 10:00 | - |
98C | 0:10 | 36 |
annealing temperature | 0:30 | 36 |
72C | 0:20 | 36 |
72C | 5:00 | - |
10C | hold | - |
details (primers, temp, expected fragment length):
- cycAX - FW_1, RV_2, 61C, 749bp
- HAO - FW_2, RV_3, 64C, 751bp
- AMO - FW_2, RV_3, 63C, 750bp
- Nir - FW_2, RV_3, 64C, 733bp
- Nir - FW_5, RV_6, 71C, 737bp
Results
Conclusion
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