"
Team:Michigan/Modeling
From 2013.igem.org
(Difference between revisions)
(→Introduction) |
|||
| Line 31: | Line 31: | ||
• form of mass action models/solvability doc | • form of mass action models/solvability doc | ||
| - | • analytical modeling | + | • analytical modeling: ERSESCO |
• equation | • equation | ||
| Line 52: | Line 52: | ||
[[File:Expression.jpg|center]] | [[File:Expression.jpg|center]] | ||
[[File:ExpressionModelFigure.png|center]] | [[File:ExpressionModelFigure.png|center]] | ||
| - | + | Equation: | |
[[File:ExpressionModel1.png|218px|center]] | [[File:ExpressionModel1.png|218px|center]] | ||
Solution: | Solution: | ||
| Line 65: | Line 65: | ||
[[File:Switch.jpg|center]] | [[File:Switch.jpg|center]] | ||
[[File:SwitchModelFigure.png|center]] | [[File:SwitchModelFigure.png|center]] | ||
| - | + | Equation: | |
[[File:SwitchModel1.png|395px|center]] | [[File:SwitchModel1.png|395px|center]] | ||
| - | |||
[[File:SwitchModel2.png|158px|center]] | [[File:SwitchModel2.png|158px|center]] | ||
Reduction: | Reduction: | ||
| Line 88: | Line 87: | ||
[[File:InducedHbif.jpg|center]] | [[File:InducedHbif.jpg|center]] | ||
[[File:InducibleHbifModelFigure.png|center]] | [[File:InducibleHbifModelFigure.png|center]] | ||
| - | + | Equation: | |
[[File:InducibleHbifModel1.png |355px|center]] | [[File:InducibleHbifModel1.png |355px|center]] | ||
| - | |||
[[File:InducibleHbifModel2.png |242px|center]] | [[File:InducibleHbifModel2.png |242px|center]] | ||
Reduction: | Reduction: | ||
| Line 98: | Line 96: | ||
Equilibration: | Equilibration: | ||
[[File:InducibleHbifModel5.png |204px|center]] | [[File:InducibleHbifModel5.png |204px|center]] | ||
| + | Stabilization: | ||
Calibration: | Calibration: | ||
[[File:InducibleHbifModel6-1.png |335px|center]] | [[File:InducibleHbifModel6-1.png |335px|center]] | ||
| Line 103: | Line 102: | ||
=[[Team:Michigan/Modeling/Future Directions|Future Directions]]= | =[[Team:Michigan/Modeling/Future Directions|Future Directions]]= | ||
| - | + | Data! | |
<!-- *** What falls between these lines is the Alert Box! You can remove it from your pages once you have read and understood the alert *** --> | <!-- *** What falls between these lines is the Alert Box! You can remove it from your pages once you have read and understood the alert *** --> | ||
Revision as of 15:39, 20 September 2013
Contents |
Overview
Model of Recombinase Expression
Model of the Switch
Model of Inducible Hbif
Introduction
• switch modeling
• goals: produce both states of switch, use model to optimize switch
• mass action modeling
• what is mass action
• pros of mass action modeling, i.e. why we used it
• form of mass action models/solvability doc
• analytical modeling: ERSESCO
• equation
• reduction
• solution
• equilibration
• stabilization
• calibration
• optimization
Expression Model
Equation:
Solution:
Equilibration:
Calibration:
Switch Model
Equation:
Reduction:
Solution:
Equilibration:
Calibration:
Optimization:
Inducible Hbif Model
Equation:
Reduction:
Solution:
Equilibration:
Stabilization: Calibration:
Future Directions
Data!
This is a template page. READ THESE INSTRUCTIONS.
You are provided with this team page template with which to start the iGEM season. You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki. You can find some examples HERE.
You MUST have all of the pages listed in the menu below with the names specified. PLEASE keep all of your pages within your teams namespace.
| Home | Team | Official Team Profile | Project | Parts Submitted to the Registry | Modeling | Notebook | Safety | Attributions |
|---|
