Template:Kyoto/Notebook/Aug 30
From 2013.igem.org
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|NC||1 µL||0 µL||0 µL||0 µL||0 µL||0 µL||1 µL||0.1 µL||7.9 µL||10 µL | |NC||1 µL||0 µL||0 µL||0 µL||0 µL||0 µL||1 µL||0.1 µL||7.9 µL||10 µL | ||
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+ | </div> | ||
+ | ===Electrophoresis=== | ||
+ | <div class="experiment"> | ||
+ | <span class="author">No name</span> | ||
+ | {| class="wikitable" | ||
+ | !Lane||Sample | ||
+ | |- | ||
+ | |1|| | ||
+ | |- | ||
+ | |2||8/21 RBS-lysis2-9(Colony PCR prodution) | ||
+ | |- | ||
+ | |3||8/21 RBS-lysis2-8(Colony PCR prodution) | ||
+ | |- | ||
+ | |4||8/21 RBS-lysis2-7(Colony PCR prodution) | ||
+ | |- | ||
+ | |5||8/21 RBS-lysis2-10(Colony PCR prodution) | ||
+ | |- | ||
+ | |6||8/21 RBS-lysis2-11(Colony PCR prodution) | ||
+ | |- | ||
+ | |7||8/21 RBS-lysis2-12(Colony PCR prodution) | ||
+ | |- | ||
+ | |8||8/21 RBS-lysis2-13(Colony PCR prodution) | ||
+ | |- | ||
+ | |9||8/21 RBS-lysis2-14(Colony PCR prodution) | ||
+ | |} | ||
+ | [[File:igku_xxxxxx.xxx]]<br> | ||
</div> | </div> |
Revision as of 11:06, 22 September 2013
Contents |
Aug 30
Gel Extraction
Name | quantity | concentration[µg/mL] | 260/280 | 260/230 |
---|---|---|---|---|
pT181 attenuator(2) (EcoRI & SpeI) | 305.3 | 2.2 | 1.66 | 0.36 |
pT181 attenuator(2) (XbaI & PstI) | 217.7 | 3.9 | 1.73 | 0.04 |
pT181 antisense(2) (EcoRI & SpeI) | 347.7 | 3.1 | 1.88 | 0.31 |
pT181 antisense(2) (XbaI & PstI) | 376.5 | 5.9 | 0.49 | 2.36 |
pSB1C3 (EcoRI & SpeI) | 436.6 | 30.7 | 1.03 | 1.28 |
pSB1C3 (XbaI & PstI) | 457.4 | 7.9 | 1.65 | 0.42 |
Spinach (EcoRI & SpeI) | 490.5 | 3.0 | 1.87 | 0.26 |
tetR aptamer 12_1R (EcoRI & SpeI) | 451.7 | -12.8 | 5.56 | -0.04 |
Miniprep
DNA | concentration[µg/mL] | 260/280 | 260/230 |
---|---|---|---|
RBS-lysis2 9 | 264.6 | 1.97 | 2.21 |
RBS-lysis2 12 | 220.0 | 1.89 | 2.46 |
RBS-lysis2 14 | 195.3 | 1.88 | 1.53 |
Colony PCR
Sample | base pair |
---|---|
8/29 Pcon-RBS-GFP-DT-Pcon-RBS-luxR-DT(8/20 LB Amp) (1)~(4) | 2143 |
8/29 Plux-RBS-GFP-DT(8/27 LB-CP) (1)~(2) | 1227 |
8/29 Pbad/araC-RBS-RFP{BBa_I13516} (8/21 LB-CP) (1)~(2) | 2256 |
8/29 RBS-lysis3-DT-(1) | 1210 |
PreDenature | Denature | Annealing | Extension | cycle |
---|---|---|---|---|
94°C | 94°C | 55°C | 68°C | -- |
5min | 30s | 30s | 2min | 30cycle |
Ethanol Precipitation
DNA |
---|
pT181 attenuator-(2) (EcoRI & SpeI) |
pT181 attenuator-(2) (XbaI & PstI) |
pT181 antisense-(2) (EcoRI & SpeI) |
pT181 antisense-(2) (XbaI & PstI) |
pSB1C3 (EcoRI & SpeI) |
pSB1C3 (XbaI & PstI) |
Spinach (EcoRI & SpeI) |
tetR aptamer 12_1R (EcoRI & SpeI) |
Restriction Enzyme Digestion
8/30 RBS-lysis2 (9) | EcoRI | SpeI | 10x bufferB | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 7.5 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 18.2 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/22 pSB1C3-(2) | EcoRI | SpeI | 10x Buffer | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 8 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 17.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 7.9 µL | 10 µL |
8/22 pSB1C3-(2) | XbaI | PstI | BufferD | BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 8 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 17.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 7.9 µL | 10 µL |
8/21 Spinach (1) | EcoRI | SpeI | 10x BufferB | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 4 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 21.9 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/21 tetR aptamer 12_1R (1) | EcoRI | SpeI | 10xBufferB | 100xBSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 3 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 22.7 µL | 30 µL |
NC | 0.4 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/21 pT181 attenuator-(2) | EcoRI | SpeI | XbaI | PstI | 10x BufferB | 10x BufferD | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|---|---|---|
2 cuts | 4 µL | 0.5 µL | 0.5 µL | 0 µL | 0 µL | 3 µL | 0 µL | 0.3 µL | 21.7 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0 µL | 0.1 µL | 8.4 µL | 10 µL |
2 cuts | 4 µL | 0 µL | 0 µL | 0.5 µL | 0.5 µL | 0 µL | 3 µL | 0.3 µL | 21.7 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/21 pT181 antisense-(2) | EcoRI | SpeI | XbaI | PstI | 10x BufferB | 10x BufferD | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|---|---|---|
2 cuts | 9 µL | 0.5 µL | 0.5 µL | 0 µL | 0 µL | 3 µL | 0 µL | 0.3 µL | 16.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0 µL | 0.1 µL | 7.9 µL | 10 µL |
2 cuts | 9 µL | 0 µL | 0 µL | 0.5 µL | 0.5 µL | 0 µL | 3 µL | 0.3 µL | 16.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 7.9 µL | 10 µL |
Electrophoresis
Lane | Sample |
---|---|
1 | |
2 | 8/21 RBS-lysis2-9(Colony PCR prodution) |
3 | 8/21 RBS-lysis2-8(Colony PCR prodution) |
4 | 8/21 RBS-lysis2-7(Colony PCR prodution) |
5 | 8/21 RBS-lysis2-10(Colony PCR prodution) |
6 | 8/21 RBS-lysis2-11(Colony PCR prodution) |
7 | 8/21 RBS-lysis2-12(Colony PCR prodution) |
8 | 8/21 RBS-lysis2-13(Colony PCR prodution) |
9 | 8/21 RBS-lysis2-14(Colony PCR prodution) |