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| </div> | | </div> |
| <div id="partable"> | | <div id="partable"> |
- | <strong></strong> | + | <h3> Laccase activity test by automatic kinetic spectrophotometric assay <br>using o-phenylenediamine</h3> |
- | <h1> Laccase Activity Test</h1>
| + | <p2> |
- | <p2><p>25-09-2013 </p> | + | <p>Laccase is capable of oxidizing o-phenylenediamine (1,2-diaminobenzene) during the stopped-flow period. During oxidation, 2,3-diaminophenazin which can be determined spectrophotometrically, will be produced. Therefore, the kinetic spectrophotometric method was used here to detect laccase activity (Huang <em>et al</em>., 1996).</p> |
- | <p>Detection the conversion of the o-phenylenediamine (ELISA substrate) to colour product by laccase </p> | + | <p>After 10 to 12 hours of incubation at 37 °C, laccase showed maximum activity when 0.3 mM IPTG was used for introducing protein expression (Figure 2).</p> |
- | <p>IPTG</p>
| + | <p><a href="http://parts.igem.org/File:La1.jpg"><img alt="La1.jpg" src="https://static.igem.org/mediawiki/parts/d/d1/La1.jpg" width="939" height="488"></a></p> |
- | <p>Addition at OD=0.5</p>
| + | |
- | <p>12h incubation</p> | + | |
- | <table cellspacing="0" cellpadding="0" border="1">
| + | |
- | <col width="111" />
| + | |
- | <col width="72" span="7" />
| + | |
- | <tr>
| + | |
- | <td width="111">Laccase biobrick</td>
| + | |
- | <td width="72">Absent</td>
| + | |
- | <td width="72">Present</td>
| + | |
- | <td width="72">Present</td>
| + | |
- | <td width="72">Present</td>
| + | |
- | <td width="72">Present</td>
| + | |
- | <td width="72">Present</td>
| + | |
- | <td width="72">Present</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>IPTG (mM)</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.01</td>
| + | |
- | <td align="right">0.03</td>
| + | |
- | <td align="right">0.1</td>
| + | |
- | <td align="right">0.3</td>
| + | |
- | <td align="right">1</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>OD492nm</td>
| + | |
- | <td align="right">0.0662</td>
| + | |
- | <td align="right">0.0691</td>
| + | |
- | <td align="right">0.0722</td>
| + | |
- | <td align="right">0.0735</td>
| + | |
- | <td align="right">0.0771</td>
| + | |
- | <td align="right">0.0999</td>
| + | |
- | <td align="right">0.0968</td>
| + | |
- | </tr>
| + | |
- | </table>
| + | |
- | <p><img src="https://static.igem.org/mediawiki/2013/9/9a/Curv1.png" alt="g1" width="367" height="281" /></p>
| + | |
| <p> </p> | | <p> </p> |
| + | <h3>Laccase function verification</h3> |
| + | <p> |
| + | Empty vector-bearing (EV) and laccase-overexpressing cells (T7-RBS-Laccase) were induced by 0.1 mM IPTG at OD600 = 0.4, followed by 100 mg/L BaP treatment for 24 h. Cells were removed and extracellular BaP was determined by OD389. Values represent the average of triplicate samples where error bars denote S.E.M., and normalized by the OD389 of cells treated with DMSO only. Paired <em>t</em>-test showed a significant difference between EV and laccase-overexpressing cells (<em>p</em> ≤ 0.01) (Figure 3). |
| + | </p><p><a href="http://parts.igem.org/File:F4.jpg"><img alt="F4.jpg" src="https://static.igem.org/mediawiki/parts/e/e9/F4.jpg" width="348" height="240"></a></p> |
| <p> </p> | | <p> </p> |
- | <table cellspacing="0" cellpadding="0" border="1"> | + | <h3>Catechol 1,2-dioxygenase function verification by time series degradation assay</h3> |
- | <col width="72" />
| + | <p>Catechol 1,2-dioxygenase is resposible for phenol degredation (Naiem <em>et al</em>., 2011). Before it is integrated into our PAHs degrdation system, hydroquinone, also known as benzene-1,4-diol or quinol, which is an aromatic organic compound belonging to the phenol family, was used as a substrate to test Catechol 1,2-dioxygenase expression and activity.</p> |
- | <col width="133" />
| + | <p> |
- | <col width="111" />
| + | Time series analysis were performed. Empty vector-bearing (EV) and dioxygenase-overexpressing cells (T7-RBS-Dioxygenase) were induced by 0.3 mM IPTG at OD600 = 0.4, followed by 100 mg/L hydroquinone treatment. Cells were removed and extracellular hydroquinone was determined by OD298 at several intervals. Values represent the average of triplicate samples; error bars denote S.E.M. Paired <em>t</em>-test showed a significant difference in hydroquinone degradation trends between EV and dioxygenase-overexpressing cells (<em>p</em> ≤ 0.05) (Figure 2).</p> |
- | <col width="72" span="11" />
| + | <p><br> |
- | <tr>
| + | <a href="http://parts.igem.org/File:Di_f2.jpg"><img alt="Di f2.jpg" src="https://static.igem.org/mediawiki/parts/d/de/Di_f2.jpg" width="346" height="330"></a></p> |
- | <td width="109"></td>
| + | |
- | <td width="128">Wavelength</t>
| + | |
- | <td align="right" width="71">400</td>
| + | |
- | <td align="right" width="73">405</td>
| + | |
- | <td align="right" width="72">410</td>
| + | |
- | <td align="right" width="72">415</td>
| + | |
- | <td align="right" width="72">420</td>
| + | |
- | <td align="right" width="72">425</td>
| + | |
- | <td align="right" width="72">430</td>
| + | |
- | <td align="right" width="72">435</td>
| + | |
- | <td align="right" width="72">440</td>
| + | |
- | <td align="right" width="72">445</td>
| + | |
- | <td align="right" width="73">450</td>
| + | |
- | <td align="right" width="74">455</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Laccase biobrick</td>
| + | |
- | <td>IPTG (mM)</td>
| + | |
- | <td>400nm</td>
| + | |
- | <td>405nm</td>
| + | |
- | <td>410nm</td>
| + | |
- | <td>415nm</td>
| + | |
- | <td>420nm</td>
| + | |
- | <td>425nm</td>
| + | |
- | <td>430nm</td>
| + | |
- | <td>435nm</td>
| + | |
- | <td>440nm</td>
| + | |
- | <td>445nm</td>
| + | |
- | <td>450nm</td>
| + | |
- | <td>455nm</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Absent</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0778</td>
| + | |
- | <td align="right">0.076</td>
| + | |
- | <td align="right">0.0744</td>
| + | |
- | <td align="right">0.0736</td>
| + | |
- | <td align="right">0.0719</td>
| + | |
- | <td align="right">0.0713</td>
| + | |
- | <td align="right">0.0703</td>
| + | |
- | <td align="right">0.0694</td>
| + | |
- | <td align="right">0.0686</td>
| + | |
- | <td align="right">0.0686</td>
| + | |
- | <td align="right">0.068</td>
| + | |
- | <td align="right">0.0675</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0767</td>
| + | |
- | <td align="right">0.0751</td>
| + | |
- | <td align="right">0.0737</td>
| + | |
- | <td align="right">0.0725</td>
| + | |
- | <td align="right">0.0712</td>
| + | |
- | <td align="right">0.0706</td>
| + | |
- | <td align="right">0.0699</td>
| + | |
- | <td align="right">0.0692</td>
| + | |
- | <td align="right">0.0682</td>
| + | |
- | <td align="right">0.0687</td>
| + | |
- | <td align="right">0.0681</td>
| + | |
- | <td align="right">0.0683</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.01</td>
| + | |
- | <td align="right">0.0791</td>
| + | |
- | <td align="right">0.0773</td>
| + | |
- | <td align="right">0.0761</td>
| + | |
- | <td align="right">0.0751</td>
| + | |
- | <td align="right">0.0742</td>
| + | |
- | <td align="right">0.0731</td>
| + | |
- | <td align="right">0.0728</td>
| + | |
- | <td align="right">0.0721</td>
| + | |
- | <td align="right">0.071</td>
| + | |
- | <td align="right">0.0716</td>
| + | |
- | <td align="right">0.071</td>
| + | |
- | <td align="right">0.0714</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.03</td>
| + | |
- | <td align="right">0.0743</td>
| + | |
- | <td align="right">0.0728</td>
| + | |
- | <td align="right">0.0711</td>
| + | |
- | <td align="right">0.07</td>
| + | |
- | <td align="right">0.0693</td>
| + | |
- | <td align="right">0.0688</td>
| + | |
- | <td align="right">0.0681</td>
| + | |
- | <td align="right">0.0677</td>
| + | |
- | <td align="right">0.0675</td>
| + | |
- | <td align="right">0.068</td>
| + | |
- | <td align="right">0.0681</td>
| + | |
- | <td align="right">0.0692</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.1</td>
| + | |
- | <td align="right">0.0761</td>
| + | |
- | <td align="right">0.0743</td>
| + | |
- | <td align="right">0.0727</td>
| + | |
- | <td align="right">0.072</td>
| + | |
- | <td align="right">0.0703</td>
| + | |
- | <td align="right">0.0699</td>
| + | |
- | <td align="right">0.0689</td>
| + | |
- | <td align="right">0.0685</td>
| + | |
- | <td align="right">0.0684</td>
| + | |
- | <td align="right">0.069</td>
| + | |
- | <td align="right">0.07</td>
| + | |
- | <td align="right">0.0711</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.3</td>
| + | |
- | <td align="right">0.0964</td>
| + | |
- | <td align="right">0.0946</td>
| + | |
- | <td align="right">0.0931</td>
| + | |
- | <td align="right">0.0922</td>
| + | |
- | <td align="right">0.0909</td>
| + | |
- | <td align="right">0.0903</td>
| + | |
- | <td align="right">0.09</td>
| + | |
- | <td align="right">0.0901</td>
| + | |
- | <td align="right">0.0902</td>
| + | |
- | <td align="right">0.0917</td>
| + | |
- | <td align="right">0.0926</td>
| + | |
- | <td align="right">0.0943</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">1</td>
| + | |
- | <td align="right">0.0947</td>
| + | |
- | <td align="right">0.0927</td>
| + | |
- | <td align="right">0.0912</td>
| + | |
- | <td align="right">0.0901</td>
| + | |
- | <td align="right">0.0887</td>
| + | |
- | <td align="right">0.0881</td>
| + | |
- | <td align="right">0.0879</td>
| + | |
- | <td align="right">0.0873</td>
| + | |
- | <td align="right">0.0878</td>
| + | |
- | <td align="right">0.0891</td>
| + | |
- | <td align="right">0.0898</td>
| + | |
- | <td align="right">0.0916</td>
| + | |
- | </tr>
| + | |
- | </table>
| + | |
- | <table cellspacing="0" cellpadding="0" border="1">
| + | |
- | <col width="72" span="16" />
| + | |
- | <tr>
| + | |
- | <td width="109"></td>
| + | |
- | <td width="128">Wavelength</td>
| + | |
- | <td align="right" width="72">460</td>
| + | |
- | <td align="right" width="72">465</td>
| + | |
- | <td align="right" width="72">470</td>
| + | |
- | <td align="right" width="72">475</td>
| + | |
- | <td align="right" width="72">480</td>
| + | |
- | <td align="right" width="72">485</td>
| + | |
- | <td align="right" width="72">490</td>
| + | |
- | <td align="right" width="72">495</td>
| + | |
- | <td align="right" width="72">500</td>
| + | |
- | <td align="right" width="72">505</td>
| + | |
- | <td align="right" width="72">510</td>
| + | |
- | <td align="right" width="75">515</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Laccase biobrick</td>
| + | |
- | <td>IPTG (mM)</td>
| + | |
- | <td>460nm</td>
| + | |
- | <td>465nm</td>
| + | |
- | <td>470nm</td>
| + | |
- | <td>475nm</td>
| + | |
- | <td>480nm</td>
| + | |
- | <td>485nm</td>
| + | |
- | <td>490nm</td>
| + | |
- | <td>495nm</td>
| + | |
- | <td>500nm</td>
| + | |
- | <td>505nm</td>
| + | |
- | <td>510nm</td>
| + | |
- | <td>515nm</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Absent</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0673</td>
| + | |
- | <td align="right">0.067</td>
| + | |
- | <td align="right">0.0667</td>
| + | |
- | <td align="right">0.0667</td>
| + | |
- | <td align="right">0.0667</td>
| + | |
- | <td align="right">0.0657</td>
| + | |
- | <td align="right">0.0652</td>
| + | |
- | <td align="right">0.0656</td>
| + | |
- | <td align="right">0.0646</td>
| + | |
- | <td align="right">0.0637</td>
| + | |
- | <td align="right">0.0629</td>
| + | |
- | <td align="right">0.0623</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0681</td>
| + | |
- | <td align="right">0.0677</td>
| + | |
- | <td align="right">0.0677</td>
| + | |
- | <td align="right">0.0675</td>
| + | |
- | <td align="right">0.0675</td>
| + | |
- | <td align="right">0.0674</td>
| + | |
- | <td align="right">0.068</td>
| + | |
- | <td align="right">0.0684</td>
| + | |
- | <td align="right">0.0672</td>
| + | |
- | <td align="right">0.0658</td>
| + | |
- | <td align="right">0.0635</td>
| + | |
- | <td align="right">0.0625</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.01</td>
| + | |
- | <td align="right">0.0712</td>
| + | |
- | <td align="right">0.0711</td>
| + | |
- | <td align="right">0.0707</td>
| + | |
- | <td align="right">0.0709</td>
| + | |
- | <td align="right">0.0716</td>
| + | |
- | <td align="right">0.0709</td>
| + | |
- | <td align="right">0.0711</td>
| + | |
- | <td align="right">0.0715</td>
| + | |
- | <td align="right">0.0699</td>
| + | |
- | <td align="right">0.068</td>
| + | |
- | <td align="right">0.0658</td>
| + | |
- | <td align="right">0.065</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.03</td>
| + | |
- | <td align="right">0.0696</td>
| + | |
- | <td align="right">0.0698</td>
| + | |
- | <td align="right">0.0703</td>
| + | |
- | <td align="right">0.0705</td>
| + | |
- | <td align="right">0.0712</td>
| + | |
- | <td align="right">0.0721</td>
| + | |
- | <td align="right">0.0726</td>
| + | |
- | <td align="right">0.0735</td>
| + | |
- | <td align="right">0.0701</td>
| + | |
- | <td align="right">0.0665</td>
| + | |
- | <td align="right">0.0621</td>
| + | |
- | <td align="right">0.0602</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.1</td>
| + | |
- | <td align="right">0.072</td>
| + | |
- | <td align="right">0.0724</td>
| + | |
- | <td align="right">0.0731</td>
| + | |
- | <td align="right">0.0735</td>
| + | |
- | <td align="right">0.0749</td>
| + | |
- | <td align="right">0.0758</td>
| + | |
- | <td align="right">0.0767</td>
| + | |
- | <td align="right">0.0773</td>
| + | |
- | <td align="right">0.0732</td>
| + | |
- | <td align="right">0.0686</td>
| + | |
- | <td align="right">0.0631</td>
| + | |
- | <td align="right">0.0606</td>
| + | |
- | </tr>
| + | |
- | <tr> | + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.3</td>
| + | |
- | <td align="right">0.0962</td>
| + | |
- | <td align="right">0.0971</td>
| + | |
- | <td align="right">0.0974</td>
| + | |
- | <td align="right">0.0983</td>
| + | |
- | <td align="right">0.1002</td>
| + | |
- | <td align="right">0.1029</td>
| + | |
- | <td align="right">0.1046</td>
| + | |
- | <td align="right">0.1054</td>
| + | |
- | <td align="right">0.0987</td>
| + | |
- | <td align="right">0.0922</td>
| + | |
- | <td align="right">0.0838</td>
| + | |
- | <td align="right">0.08</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">1</td>
| + | |
- | <td align="right">0.0932</td>
| + | |
- | <td align="right">0.0937</td>
| + | |
- | <td align="right">0.0943</td>
| + | |
- | <td align="right">0.0951</td>
| + | |
- | <td align="right">0.0973</td>
| + | |
- | <td align="right">0.099</td>
| + | |
- | <td align="right">0.1004</td>
| + | |
- | <td align="right">0.101</td>
| + | |
- | <td align="right">0.0954</td>
| + | |
- | <td align="right">0.0893</td>
| + | |
- | <td align="right">0.0815</td>
| + | |
- | <td align="right">0.0774</td>
| + | |
- | </tr>
| + | |
- | </table>
| + | |
- | <table cellpadding="0" cellspacing="0" border="1">
| + | |
- | <col width="72" span="16" />
| + | |
- | <tr>
| + | |
- | <td width="109"></td>
| + | |
- | <td width="128">Wavelength</td>
| + | |
- | <td align="right" width="72">520</td>
| + | |
- | <td align="right" width="71">525</td>
| + | |
- | <td align="right" width="73">530</td>
| + | |
- | <td align="right" width="73">535</td>
| + | |
- | <td align="right" width="71">540</td>
| + | |
- | <td align="right" width="72">545</td>
| + | |
- | <td align="right" width="71">550</td>
| + | |
- | <td align="right" width="74">555</td>
| + | |
- | <td align="right" width="72">560</td>
| + | |
- | <td align="right" width="71">565</td>
| + | |
- | <td align="right" width="72">570</td>
| + | |
- | <td align="right" width="74">575</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Laccase biobrick</td>
| + | |
- | <td>IPTG (mM)</td>
| + | |
- | <td>520nm</td>
| + | |
- | <td>525nm</td>
| + | |
- | <td>530nm</td>
| + | |
- | <td>535nm</td>
| + | |
- | <td>540nm</td>
| + | |
- | <td>545nm</td>
| + | |
- | <td>550nm</td>
| + | |
- | <td>555nm</td>
| + | |
- | <td>560nm</td>
| + | |
- | <td>565nm</td>
| + | |
- | <td>570nm</td>
| + | |
- | <td>575nm</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Absent</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0615</td>
| + | |
- | <td align="right">0.0617</td>
| + | |
- | <td align="right">0.0616</td>
| + | |
- | <td align="right">0.0613</td>
| + | |
- | <td align="right">0.0607</td>
| + | |
- | <td align="right">0.0606</td>
| + | |
- | <td align="right">0.0607</td>
| + | |
- | <td align="right">0.0606</td>
| + | |
- | <td align="right">0.0602</td>
| + | |
- | <td align="right">0.0599</td>
| + | |
- | <td align="right">0.0596</td>
| + | |
- | <td align="right">0.0591</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0617</td>
| + | |
- | <td align="right">0.0611</td>
| + | |
- | <td align="right">0.061</td>
| + | |
- | <td align="right">0.0605</td>
| + | |
- | <td align="right">0.0595</td>
| + | |
- | <td align="right">0.0596</td>
| + | |
- | <td align="right">0.0593</td>
| + | |
- | <td align="right">0.0593</td>
| + | |
- | <td align="right">0.0591</td>
| + | |
- | <td align="right">0.0582</td>
| + | |
- | <td align="right">0.0579</td>
| + | |
- | <td align="right">0.0575</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.01</td>
| + | |
- | <td align="right">0.0641</td>
| + | |
- | <td align="right">0.064</td>
| + | |
- | <td align="right">0.0636</td>
| + | |
- | <td align="right">0.0628</td>
| + | |
- | <td align="right">0.0622</td>
| + | |
- | <td align="right">0.0621</td>
| + | |
- | <td align="right">0.0615</td>
| + | |
- | <td align="right">0.0616</td>
| + | |
- | <td align="right">0.0614</td>
| + | |
- | <td align="right">0.0608</td>
| + | |
- | <td align="right">0.0607</td>
| + | |
- | <td align="right">0.06</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.03</td>
| + | |
- | <td align="right">0.0586</td>
| + | |
- | <td align="right">0.0579</td>
| + | |
- | <td align="right">0.0573</td>
| + | |
- | <td align="right">0.0564</td>
| + | |
- | <td align="right">0.0559</td>
| + | |
- | <td align="right">0.0555</td>
| + | |
- | <td align="right">0.055</td>
| + | |
- | <td align="right">0.0552</td>
| + | |
- | <td align="right">0.0547</td>
| + | |
- | <td align="right">0.0543</td>
| + | |
- | <td align="right">0.0539</td>
| + | |
- | <td align="right">0.0537</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.1</td>
| + | |
- | <td align="right">0.0585</td>
| + | |
- | <td align="right">0.0577</td>
| + | |
- | <td align="right">0.0572</td>
| + | |
- | <td align="right">0.0562</td>
| + | |
- | <td align="right">0.0553</td>
| + | |
- | <td align="right">0.055</td>
| + | |
- | <td align="right">0.0546</td>
| + | |
- | <td align="right">0.0541</td>
| + | |
- | <td align="right">0.0535</td>
| + | |
- | <td align="right">0.0531</td>
| + | |
- | <td align="right">0.0527</td>
| + | |
- | <td align="right">0.0525</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.3</td>
| + | |
- | <td align="right">0.077</td>
| + | |
- | <td align="right">0.076</td>
| + | |
- | <td align="right">0.0744</td>
| + | |
- | <td align="right">0.0729</td>
| + | |
- | <td align="right">0.0723</td>
| + | |
- | <td align="right">0.0713</td>
| + | |
- | <td align="right">0.0707</td>
| + | |
- | <td align="right">0.0703</td>
| + | |
- | <td align="right">0.07</td>
| + | |
- | <td align="right">0.0694</td>
| + | |
- | <td align="right">0.0686</td>
| + | |
- | <td align="right">0.0685</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">1</td>
| + | |
- | <td align="right">0.0749</td>
| + | |
- | <td align="right">0.0738</td>
| + | |
- | <td align="right">0.073</td>
| + | |
- | <td align="right">0.0712</td>
| + | |
- | <td align="right">0.07</td>
| + | |
- | <td align="right">0.0698</td>
| + | |
- | <td align="right">0.0693</td>
| + | |
- | <td align="right">0.069</td>
| + | |
- | <td align="right">0.0687</td>
| + | |
- | <td align="right">0.0682</td>
| + | |
- | <td align="right">0.0681</td>
| + | |
- | <td align="right">0.0678</td>
| + | |
- | </tr>
| + | |
- | </table>
| + | |
- | <table cellspacing="0" cellpadding="0" border="1">
| + | |
- | <col width="72" span="13" />
| + | |
- | <tr>
| + | |
- | <td width="109"></td>
| + | |
- | <td width="128">Wavelength</td>
| + | |
- | <td align="right" width="72">580</td>
| + | |
- | <td align="right" width="72">585</td>
| + | |
- | <td align="right" width="72">590</td>
| + | |
- | <td align="right" width="72">595</td>
| + | |
- | <td align="right" width="72">600</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Laccase biobrick</td>
| + | |
- | <td>IPTG (mM)</td>
| + | |
- | <td>580nm</td>
| + | |
- | <td>585nm</td>
| + | |
- | <td>590nm</td>
| + | |
- | <td>595nm</td>
| + | |
- | <td>600nm</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Absent</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0584</td>
| + | |
- | <td align="right">0.0585</td>
| + | |
- | <td align="right">0.0582</td>
| + | |
- | <td align="right">0.0577</td>
| + | |
- | <td align="right">0.0579</td>
| + | |
- | </tr> | + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0</td>
| + | |
- | <td align="right">0.0573</td>
| + | |
- | <td align="right">0.0571</td>
| + | |
- | <td align="right">0.057</td>
| + | |
- | <td align="right">0.0564</td>
| + | |
- | <td align="right">0.0565</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.01</td>
| + | |
- | <td align="right">0.0595</td>
| + | |
- | <td align="right">0.0594</td>
| + | |
- | <td align="right">0.0595</td>
| + | |
- | <td align="right">0.0589</td>
| + | |
- | <td align="right">0.0591</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.03</td>
| + | |
- | <td align="right">0.0533</td>
| + | |
- | <td align="right">0.0532</td>
| + | |
- | <td align="right">0.053</td>
| + | |
- | <td align="right">0.0522</td>
| + | |
- | <td align="right">0.0528</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.1</td>
| + | |
- | <td align="right">0.0524</td>
| + | |
- | <td align="right">0.052</td>
| + | |
- | <td align="right">0.0512</td>
| + | |
- | <td align="right">0.0512</td>
| + | |
- | <td align="right">0.0509</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">0.3</td>
| + | |
- | <td align="right">0.0678</td>
| + | |
- | <td align="right">0.0675</td>
| + | |
- | <td align="right">0.0671</td>
| + | |
- | <td align="right">0.0668</td>
| + | |
- | <td align="right">0.0663</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td>Present</td>
| + | |
- | <td align="right">1</td>
| + | |
- | <td align="right">0.067</td>
| + | |
- | <td align="right">0.0665</td>
| + | |
- | <td align="right">0.0665</td>
| + | |
- | <td align="right">0.066</td>
| + | |
- | <td align="right">0.0659</td>
| + | |
- | </tr>
| + | |
- | </table>
| + | |
- | <p><img src="https://static.igem.org/mediawiki/2013/3/3d/Curv2.png" alt="g2" width="726" height="289" /></p>
| + | |
| <p> </p> | | <p> </p> |
- | <p> </p> | + | <h3>Cell Viability Experiment with Voltage </h3> |
- | <table cellspacing="0" cellpadding="0" border="1">
| + | |
- | <col width="72" span="5"/>
| + | |
- | <tr>
| + | |
- | <td width="113"></td>
| + | |
- | <td colspan="6">Calculate the activity of laccase from acitivty of peroxidase</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td> </td>
| + | |
- | <td colspan="6">1U is defined as μmol conversion of products per minute</td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td align="right">Control</td>
| + | |
- | <td width="75" align="right">0</td>
| + | |
- | <td width="75" align="right">0.05</td>
| + | |
- | <td width="75" align="right">0.1</td>
| + | |
- | <td width="75" align="right">1</td>
| + | |
- | <td width="75" align="right">5</td>
| + | |
- |
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td align="right">Peroxidase(mU)</td>
| + | |
- | <td align="right">0.0609</td>
| + | |
- | <td align="right">0.0744</td>
| + | |
- | <td align="right">0.0868</td>
| + | |
- | <td align="right">0.2405</td>
| + | |
- | <td align="right">0.4129</td>
| + | |
- |
| + | |
- | </tr>
| + | |
- | </table>
| + | |
- | <p><img src="https://static.igem.org/mediawiki/2013/1/1e/Curv3.png" alt="g3" width="435" height="334" /></p>
| + | |
- | | + | |
- | <h1>E. coli BL21 transformed with catechol 1,2-dioxygenase</h1>
| + | |
- | <p>wild type E. coli BL21</p>
| + | |
- | <p> <br />
| + | |
- | 0 50.00 50.00<br />
| + | |
- | 1 16.54 50.00<br />
| + | |
- | 2 0.00 37.69</p>
| + | |
- | <p><img src="https://static.igem.org/mediawiki/2013/a/ab/Curv4.png" alt="graph" width="622" height="340" /></p>
| + | |
- | <p>Pearson's Chi-squared test</p>
| + | |
- | <p>data: a<br />
| + | |
- | X-squared = 33.8347, df = 2, p-value = 4.497e-08</p>
| + | |
- | <h1>Cell Viability Experiment with Voltage </h1>
| + | |
| <p>This experiment is designed to investigate the BL21 viability when voltage is applied. This is necessary for the voltage sensor experiments in our project. The protocol of the following experiment can be found here.(hyperlink to <a href="http://www.facebook.com/l.php?u=http%3A%2F%2F2013.igem.org%2FTeam%3AHong_Kong_CUHK%2Fprotocol&h=dAQGS0x-i">https://2013.igem.org/Team:Hong_Kong_CUHK/protocol</a>)</p> | | <p>This experiment is designed to investigate the BL21 viability when voltage is applied. This is necessary for the voltage sensor experiments in our project. The protocol of the following experiment can be found here.(hyperlink to <a href="http://www.facebook.com/l.php?u=http%3A%2F%2F2013.igem.org%2FTeam%3AHong_Kong_CUHK%2Fprotocol&h=dAQGS0x-i">https://2013.igem.org/Team:Hong_Kong_CUHK/protocol</a>)</p> |
| <p align="center"><img width="300" height="225" src="https://static.igem.org/mediawiki/2013/a/a3/Plate.jpg" alt="Macintosh HD:Users:melisajunata:Desktop:picts result:IMG_2676.JPG" /> | | <p align="center"><img width="300" height="225" src="https://static.igem.org/mediawiki/2013/a/a3/Plate.jpg" alt="Macintosh HD:Users:melisajunata:Desktop:picts result:IMG_2676.JPG" /> |