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Team:Newcastle/Collaborations
From 2013.igem.org
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On Friday the 12th of July our team was at UCL for the iGEM U.K. meet up. We delivered a workshop about Mathematical modelling and taught the basics of using the rule-based modelling language BioNetGen. This workshop introduced the Leeds iGEM team to BioNetGen, [https://2013.igem.org/Team:Leeds/Modeling who went on to use BioNetGen to model the Cpx pathway in their project]. | On Friday the 12th of July our team was at UCL for the iGEM U.K. meet up. We delivered a workshop about Mathematical modelling and taught the basics of using the rule-based modelling language BioNetGen. This workshop introduced the Leeds iGEM team to BioNetGen, [https://2013.igem.org/Team:Leeds/Modeling who went on to use BioNetGen to model the Cpx pathway in their project]. | ||
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These are the slides from our modelling presentation: | These are the slides from our modelling presentation: | ||
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This is the handout from our modelling workshop: | This is the handout from our modelling workshop: | ||
Revision as of 12:11, 30 August 2013
Contents |
Collaborations
We were able to supply Team Edinburgh with some Bacillus subtilis parameters:
| The workshop overall: | |
|---|---|
| Was well structured | 4.2 |
| Will help you build your own models | 3.9 |
| Interesting | 4.6 |
On Friday the 12th of July our team was at UCL for the iGEM U.K. meet up. We delivered a workshop about Mathematical modelling and taught the basics of using the rule-based modelling language BioNetGen. This workshop introduced the Leeds iGEM team to BioNetGen, who went on to use BioNetGen to model the Cpx pathway in their project.
These are the slides from our modelling presentation:
A downloadable version can be found here.
This is the handout from our modelling workshop:
A downloadable version can be found here.
We have helped the Manchester team with their 'introduction to modelling', giving ideas on how this could be achieved and producing a tutorial video giving a brief introduction to modelling using BioNetGen.
