Template:Kyoto/Notebook/Sep 1
From 2013.igem.org
(Difference between revisions)
(→Liquid Culture) |
(→Sep 1) |
||
Line 75: | Line 75: | ||
</div> | </div> | ||
- | === | + | ===Liquid Culture=== |
<div class="experiment"> | <div class="experiment"> | ||
- | <span class="author">Tatsui,Stephane</span> | + | <span class="author">Tatsui,Stephane,Nakamoto</span> |
{| class="wikitable" | {| class="wikitable" | ||
- | ! | + | !Sample||medium |
|- | |- | ||
- | | | + | |8/21 pSB1C3(BBa_J04450)-(1)||Plusgrow medium(+CP) |
- | | | + | |- |
- | + | |8/21 pSB1C3(BBa_J04450)-(2)||Plusgrow medium(+CP) | |
+ | |- | ||
+ | |RBS-lysis3-DT||Plusgrow medium(+CP) | ||
+ | |} | ||
- | |||
- | |||
- | |||
===M9 Medium=== | ===M9 Medium=== |
Revision as of 05:45, 23 September 2013
Contents |
Sep 1
Transformation
Name | Sample | Competent Cells | Total | Plate |
---|---|---|---|---|
8/31 tRNA-Spinach(pSB1C3) | 2µL | 20µL | 22µL | CP |
8/31 pT181 antisense(pSB1C3) | 2µL | 20µL | 22µL | CP |
8/31 pT181 attenuator(pSB1C3) | 2µL | 20µL | 22µL | CP |
8/31 pT181 antisense(pSB1C3) | 2µL | 20µL | 22µL | CP |
8/31 pT181 attenuator(2)-DT | 2µL | 20µL | 22µL | CP |
8/31 pT181 antisense-DT | 2µL | 20µL | 22µL | CP |
8/31 tRNA-Spniach-DT | 2µL | 20µL | 22µL | CP |
8/31 RBS-lysis2-DT | 2µL | 20µL | 22µL | CP |
8/31 Pconst-RBS-tetR-DT | 2µL | 20µL | 22µL | Amp |
8/31 Plac-RBS-lacZα-DT | 2µL | 20µL | 22µL | CP |
8/31 Ptet-RBS-lacZα-DT | 2µL | 20µL | 22µL | CP |
8/31 | 2µL | 20µL | 22µL | CP |
ligation production PCR
Sample | base pair |
---|---|
8/31 tRNA Spinach(pSB1C3) | 459 |
8/31 pT181 antisense(2)(pSB1C3)(E+S) | 415 |
8/31 pT181 attenuator(2)(pSB1C3)(X+P) | 601 |
8/31 pT181 antisense(2)(pSB1C3)(X+P) | 415 |
8/31 pT181 attenuator(2)-DT | 754 |
8/31 pT181 antisense(2)-DT | 577 |
8/31 tRNA Spinach-DT | 596 |
8/22 pSB1C3(2)(controll) | 1383 |
PreDenature | Denature | Annealing | Extension | cycle |
---|---|---|---|---|
94°C | 94°C | 55°C | 68°C | -- |
5min | 30s | 30s | 30min | 30cycle |
Ligation
state | Vector | Inserter | ||
---|---|---|---|---|
experiment | DT(E+S) | 5.5 | 8/28 RBS-lysis1(E+S)2.4ng/µL | 2.4 |
1. Samples were evaporeted used evaporator into about 7 µL.
2. Add Ligation High 3.5µ:L and incubate 16°C 1hour.
Liquid Culture
Sample | medium |
---|---|
8/21 pSB1C3(BBa_J04450)-(1) | Plusgrow medium(+CP) |
8/21 pSB1C3(BBa_J04450)-(2) | Plusgrow medium(+CP) |
RBS-lysis3-DT | Plusgrow medium(+CP) |
M9 Medium
5xM9 liquid medium
volume | 100mL |
---|---|
NaHPO4 | 30g |
KH2PO | 3g |
Nacl | 0.25g |
NH4Cl | 0.5g |
3.75% agar solution | 400mL |
1M MgSO4 | 0.5mL |
2M Glucose | 2.8mL |
1% Vitamin B1 | 0.5mL |
1M CaCl2 | 0.05mL |
1. mix 5xM9 medium and 3.75%Agar solution 400mL
2. Add 1M MgSO4, 2M Glucose and 1 VitaminB1 0.5mL
3. Add CaCl2 while shaking Erlenmeyer flask.
Miniprep
DNA | concentration[µg/mL] | 260/280 | 260/230 |
---|---|---|---|
8/21 pSB1C3(1) | 309.2 | 1.69 | 1.72 |
8/21 pSB1C3(2) | 201.6 | 1.65 | 1.76 |
Kanamycin applicaton
Add 20µL Kanamycin into 80µL MilliQ and apply it on a 9/1 M9 plate
Plating
Apply entA-colony liquid culture (100µL) on M9(Km)plate and incubate 37°C