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Team:SUSTC-Shenzhen-B/Sandbox
From 2013.igem.org
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| + | <div class="ui vertical pointing secondary menu"> | ||
| + | <a class="active item">Motivation</a> | ||
| + | <a class="item">Actions</a> | ||
| + | <a class="item">Human practice</a> | ||
| + | </div> | ||
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| + | <h2 class='ui dividing header'>Motivation</h2> | ||
| + | <section id='motivation'> | ||
| + | <p>So, here’s our actions<p> | ||
| + | <h3>Technique standard and Database</h3> | ||
| + | <p>We proposed two technique standards this year (RFC 101 and RFC 97) to give accurate definitions of logical gene module and genetic circuits. The standard of genetic circuits is very powerful and works as the theoretical base of the software. The standard of logical gene module deals problem of regulation relations and you can see it in LGD (Logical Genetic Diagram). We designed a database carefully to record the circuits we find in a stand format And many software share the same central database.</p> | ||
| + | <h3>Circuit+</h3> | ||
| + | <p>We develop Circuit+ as our weapon to promote the idea and standard. So, it works like Registry of Standard Biological Parts. It is website of circuits’ information and behind it is the well-built database. And you can find many ways to browse and find a certain circuit. For open and sharing, SBOL is used in the data-exchanging interface of the software and users can upload and comment circuits. To provide information of regulatory relation, LGD (Logical Genetic Diagram) is always ready when you read detail information of circuits.</p> | ||
| + | <h3>Clotho application: Circuit List and TTEC</h3> | ||
| + | <p>We transplant the software into Clotho and the name of the application is Circuit List. Since Clotho is a popular framework in synthetic biology, many people can experience our standard and software. The database is the same as the online one and the information is the same as the online one. We also transplanted TTEC, which is the last year iGEM software into Clotho, which is promoted by iGEM.</p> | ||
| + | <h3>Synthetic biology laboratory management</h3> | ||
| + | <p></p> | ||
| + | </section> | ||
| + | <h2 class='ui dividing header'>Actions</h2> | ||
| + | <section id='actions'> | ||
| + | </section> | ||
| + | <h2 class='ui dividing header'>Human practice</h2> | ||
| + | <section id='humanpractice'> | ||
| + | </section> | ||
| + | </div> | ||
</div> | </div> | ||
Revision as of 17:45, 27 October 2013
Overview
Project overview
Motivation
So, here’s our actions
Technique standard and Database
We proposed two technique standards this year (RFC 101 and RFC 97) to give accurate definitions of logical gene module and genetic circuits. The standard of genetic circuits is very powerful and works as the theoretical base of the software. The standard of logical gene module deals problem of regulation relations and you can see it in LGD (Logical Genetic Diagram). We designed a database carefully to record the circuits we find in a stand format And many software share the same central database.
Circuit+
We develop Circuit+ as our weapon to promote the idea and standard. So, it works like Registry of Standard Biological Parts. It is website of circuits’ information and behind it is the well-built database. And you can find many ways to browse and find a certain circuit. For open and sharing, SBOL is used in the data-exchanging interface of the software and users can upload and comment circuits. To provide information of regulatory relation, LGD (Logical Genetic Diagram) is always ready when you read detail information of circuits.
Clotho application: Circuit List and TTEC
We transplant the software into Clotho and the name of the application is Circuit List. Since Clotho is a popular framework in synthetic biology, many people can experience our standard and software. The database is the same as the online one and the information is the same as the online one. We also transplanted TTEC, which is the last year iGEM software into Clotho, which is promoted by iGEM.
