Team:Kyoto/Notebook
From 2013.igem.org
(Difference between revisions)
(→Transformation) |
(→Aug 20) |
||
Line 45: | Line 45: | ||
===Aug 20=== | ===Aug 20=== | ||
====Miniprep==== | ====Miniprep==== | ||
- | < | + | <div class="experiment"> |
+ | <span class="author">by kojima </span> | ||
{|class="wikitable" | {|class="wikitable" | ||
!DNA!!concentration[μg/μL]!!260/280!!260/230 | !DNA!!concentration[μg/μL]!!260/280!!260/230 | ||
Line 69: | Line 70: | ||
|8/18 RBS-lysis3 -2||212||1.30||1.35 | |8/18 RBS-lysis3 -2||212||1.30||1.35 | ||
|} | |} | ||
- | + | </div> | |
====LB Culture Medium==== | ====LB Culture Medium==== | ||
- | < | + | <div class="experiment"> |
- | + | <span class="author">by Okazaki</span> | |
{|class="wikitable" | {|class="wikitable" | ||
+ | !volume||200mL | ||
+ | |- | ||
|Bacto Trypton||2g | |Bacto Trypton||2g | ||
|- | |- | ||
Line 92: | Line 95: | ||
not written yet | not written yet | ||
- | + | </div> | |
====Ristriction Enzyme Proccessing==== | ====Ristriction Enzyme Proccessing==== | ||
- | < | + | <div class="experiment"> |
+ | <span class="author">by Kojima and Ashida</span> | ||
{|class="wikitable" | {|class="wikitable" | ||
!8/20 Ptet -1(220μg/mL)!!EcoRI!!XbaI!!10x BSA!!10x buffer M!!MilliQ!!total | !8/20 Ptet -1(220μg/mL)!!EcoRI!!XbaI!!10x BSA!!10x buffer M!!MilliQ!!total | ||
Line 163: | Line 167: | ||
incubate ~20:00 | incubate ~20:00 | ||
- | + | </div> | |
====Transformation==== | ====Transformation==== | ||
<div class="experiment"> | <div class="experiment"> |
Revision as of 08:33, 21 August 2013
Home | Team | Official Team Profile | Project | Parts Submitted to the Registry | Modeling | Notebook | Material and method | Safety | Attributions |
---|
Contents |
RNA Oscillator
template
transformation
Name | Well | Sample | Competent Cells | Total | Plate |
---|---|---|---|---|---|
いでんし | ぱーつのうぇる | なんちゃらµL | ごにょごにょµL | ほにゃららµL | せいげんこーそ |
いかどうよう | |||||
Turing Pattern
Aug 20
Miniprep
DNA | concentration[μg/μL] | 260/280 | 260/230 |
---|---|---|---|
8/18 Ptet -1 | 220 | 1.69 | 1.87 |
8/18 Ptet -2 | 210 | 1.69 | 1.71 |
8/18 RBS-tetR-DT -1 | 236 | 1.63 | 1.69 |
8/18 RBS-tetR-DT -2 | 182 | 1.65 | 1.98 |
8/18 J23100-RBS-GFP-DT -1 | 334 | 1.71 | 2.12 |
8/18 J23100-RBS-luxR-DT -1 | 440 | 1.67 | 1.60 |
8/18 J23100-RBS-luxR-DT -2 | 344 | 1.68 | 1.83 |
8/18 J23100-RBS-lacZα-DT -1 | 280 | 1.70 | 1.81 |
8/18 RBS-lysis3 -1 | 282 | 1.67 | 1.76 |
8/18 RBS-lysis3 -2 | 212 | 1.30 | 1.35 |
LB Culture Medium
volume | 200mL |
---|---|
Bacto Trypton | 2g |
Bacto yeast extract | 1g |
Nacl | 1g |
Agar Powder | 2g |
Amp | 40μl |
1.Measuring reagents and put they in the Erlenmeyer flask
2.diluting in measuring cylinder to 200ml total
3.autoclaving
4.adding ampicirine 40ml
not written yet
Ristriction Enzyme Proccessing
8/20 Ptet -1(220μg/mL) | EcoRI | XbaI | 10x BSA | 10x buffer M | MilliQ | total |
---|---|---|---|---|---|---|
4.5 | 1 | 1 | 3 | 3 | 17.5 | 30 |
0.5 | 0.2 | 0 | 1 | 1 | 7.3 | 10 |
0.5 | 0 | 0.2 | 1 | 1 | 7.3 | 10 |
0.5 | 0 | 0 | 1 | 1 | 7.5 | 10 |
8/20 RBS-tetR-DT -2(182μg/mL) | EcoRI | SpeI | 10x buffer H | MilliQ | total |
---|---|---|---|---|---|
5.5 | 1 | 1 | 3 | 19.5 | 30 |
0.6 | 0.2 | 0 | 1 | 8.2 | 10 |
0.6 | 0 | 0.2 | 1 | 8.2 | 10 |
0.6 | 0 | 0 | 1 | 8.4 | 10 |
8/20 J23100-RBS-GFP-DT(334μg/ml) | EcoRI | SpeI | 10x buffer H | MilliQ | total |
---|---|---|---|---|---|
3.0 | 1 | 1 | 3 | 22 | 30 |
0.3 | 0.2 | 0 | 1 | 8.5 | 10 |
0.3 | 0 | 0.2 | 1 | 8.5 | 10 |
0.3 | 0 | 0 | 1 | 8.7 | 10 |
8/20 J23100-RBS-luxR-DT -2(344μg/mL) | EcoRI | XbaI | BSA | 10x buffer M | MilliQ | total |
---|---|---|---|---|---|---|
2.9 | 1 | 1 | 3 | 3 | 19.1 | 30 |
0.3 | 0.2 | 0 | 1 | 1 | 7.5 | 10 |
0.3 | 0 | 0.2 | 1 | 1 | 7.5 | 10 |
0.3 | 0 | 0 | 1 | 1 | 7.7 | 10 |
8/20 RBS-lysis3 -1(282μg/mL) | EcoRI | SpeI | 10x buffer H | MilliQ | total |
---|---|---|---|---|---|
3.5 | 1 | 1 | 3 | 21.5 | 30 |
0.4 | 0.2 | 0 | 1 | 8.4 | 10 |
0.4 | 0 | 0.2 | 1 | 8.4 | 10 |
0.4 | 0 | 0 | 1 | 8.6 | 10 |
8/17 DT -1(188μg/mL) | EcoRI | XbaI | 10x BSA | 10x buffer M | MilliQ | total |
---|---|---|---|---|---|---|
5.3 | 1 | 1 | 3 | 3 | 16.7 | 30 |
0.3 | 0.2 | 0 | 1 | 1 | 7.5 | 10 |
0.3 | 0 | 0.2 | 1 | 1 | 7.5 | 10 |
0.3 | 0 | 0 | 1 | 1 | 7.7 | 10 |
incubate ~20:00
Transformation
Name | Sample | Competent Cells(XL10-gold) | Total | Plate |
---|---|---|---|---|
tRNA-Spinach-tRNA | 1µL | 10µL | 11µL | 8/19 LB+Amp |
tetR-aptamer 12_PC(076) | 1µL | 10µL | 11µL | 8/19 LB+Amp |
tetR-aptamer 12_1R(113) | 1µL | 10µL | 11µL | 8/19 LB+Amp |
tetR-aptamer 12_1M(105) | 1µL | 10µL | 11µL | 8/19 LB+Amp |
pT181 attenuator | 1µL | 10µL | 11µL | 8/19 LB+Amp |
Fusin1 attenuator | 1µL | 10µL | 11µL | 8/19 LB+Amp |
Fusion3m2 attenuator | 1µL | 10µL | 11µL | 8/19 LB+Amp |
pT181 antisense | 1µL | 10µL | 11µL | 8/19 LB+Amp |
Fusion1 antisense | 1µL | 10µL | 11µL | 8/19 LB+Amp |
Fusion6 antisense | 1µL | 10µL | 11µL | 8/19 LB+Amp |
incubate 37℃ overnight 20:34~