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Team:Newcastle/Collaborations
From 2013.igem.org
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| - | On Friday the 12th of July our team was at UCL for the iGEM U.K. meet up. We delivered a workshop about Mathematical modelling | + | On Friday the 12th of July our team was at UCL for the [https://2013.igem.org/Team:Newcastle/Outreach/uk_meet iGEM U.K. meet up]. We delivered a [https://2013.igem.org/Team:Newcastle/Outreach/Workshop workshop about Mathematical modelling], including teaching the basics of using the rule-based modelling language BioNetGen. We also supplied attendees with all the software needed to produce BioNetGen models on a handy USB. This workshop introduced the Leeds iGEM team to BioNetGen, [https://2013.igem.org/Team:Leeds/Attributions who went on to use BioNetGen to model the Cpx pathway in their project]. |
These are the slides from our modelling presentation: | These are the slides from our modelling presentation: | ||
Revision as of 12:18, 30 August 2013
Contents |
Collaborations
We were able to supply Team Edinburgh with some Bacillus subtilis parameters:
| The workshop overall: | |
|---|---|
| Was well structured | 4.2 |
| Will help you build your own models | 3.9 |
| Interesting | 4.6 |
On Friday the 12th of July our team was at UCL for the iGEM U.K. meet up. We delivered a workshop about Mathematical modelling, including teaching the basics of using the rule-based modelling language BioNetGen. We also supplied attendees with all the software needed to produce BioNetGen models on a handy USB. This workshop introduced the Leeds iGEM team to BioNetGen, who went on to use BioNetGen to model the Cpx pathway in their project.
These are the slides from our modelling presentation:
A downloadable version can be found here.
This is the handout from our modelling workshop:
A downloadable version can be found here.
We have helped the Manchester team with their 'introduction to modelling', giving ideas on how this could be achieved and producing a tutorial video giving a brief introduction to modelling using BioNetGen.
