Team:UChicago/Plan
From 2013.igem.org
pUB110 BioBrick
-Digest pUB110 w/ NdeI and AflII--> gel purify-->nanodrop for concentration
-Digest pUB110 linker w/ NdeI and AflII
linker:
attcgtcttaaggaattcgcggccgcttctagagtactagtagcggccgctgcagcatatgtcatac
gtatgacatatgctgcagcggccgctactagtactctagaagcggccgcgaattccttaagacgaat
-Set up overnight ligation of digested, gel purified pUB110 and digested pUB110 linker = generates pUB110 BioBrick
-Transform into B. subtilis to amplify
-Set up O. N. cultures
-Do B. subtilis miniprep
-Digest our pUB110 BioBrick
To test pUB110 Biobrick (kanamycin resistant) construction (send for sequencing)
-Put a promoter/upstream BioBrick (in vector with chloramphenicol resistance) + RFP BioBrick from amp resistant vector => do 3 step assembly
-Do transformation in B. subtilis
-Choose transformants--> if transformants express RFP, we could conclude our pUB110 BioBrick works--> submit pUB110 BioBrick
kerA BioBrick
-Put our kerA biobrick into an empty vector w/ amp resistance (so we can use the 3 step assembly) and transform into DH5-a
-Since promoter/upstream biobrick will be in chloramphenicol resistant vector
-And our puB110 vector will use kanamycin resistance
-So that leaves our kerA biobrick the vector that is amp resistant
Orange: prefix
Green: suffix
Purple: kerA Sac signal peptide