Team:DTU-Denmark/Notebook/18 July 2013

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Revision as of 15:42, 18 July 2013 by Gosia (Talk | contribs)


Contents

208


Main purpose


  • USER reaction

Who was in the lab


Gosia, Henrike, Julia

Procedure


  • made gel for yesterday's PCR of Nir operon -> empty
  • USER reaction with HAO + pZA21 and AMO + pZA21
  • nandrop measurement of yesterday's miniprep showed it had very small yield, so we will redo it
  • inocculated cultures for miniprep of RFP in pZA21 and cycAX in pZA21

Gel electrophoresis - Nir, cycAX and plasmids from (3 with RFP, one with cycAX) miniprep

Gel electrophoresis parameters: 1% agarose gel, 80V, 55 min

USER reaction

Was performed by standard procedure

USER mix contained (per 1 sample):

  • USER enzyme - 1uL
  • NEB buffer 4 - 0.5uL
  • 10x BSA - 0.5uL
  • backbone pZA21 - 1 uL

(pZA21 amplified with USER primers and DpnI treated)

Per one reaction we mix 3uL of USER mix + 7uL of insert Inserts: AMO, HAO, water (negative control)

Incubation - USER reaction 40 min at 37 C 30 min at 25 C

Transformation of chemically competent E. coli cells.