Team:DTU-Denmark/Notebook/29 August 2013
From 2013.igem.org
29 August 2013
Navigate to the Previous or the Next Entry
Contents |
Lab 208
Main purpose
- Biobrick preparation
Who was in the lab
Henrike, Kristian, Julia
Procedure
Introduce endings for USER cloning in pSB1C3
In order to introduce our constructs in the biobrick vector we need to introduce special endings that are necessary for the USER cloning reaction. The table shows the composition of each reaction:
component | 1 | 2 | 3 | Neg |
---|---|---|---|---|
dNTPs | 1uL | 1uL | 1uL | 1uL |
HF buffer | 10uL | 10uL | 10uL | 10uL |
X7 polymerase | 0.5uL | 0.5uL | 0.5uL | 0.5uL |
MilliQ water | 28.5uL | 28.5uL | 28.5uL | 29.5uL |
template pSB1C3 | 1uL | 1uL | 1uL | - |
FW primer 57a2 | 3uL | 3uL | 3uL | 3uL |
RV primer 57b | 3uL | 3uL | 3uL | 3uL |
DMSO (100%) | 2uL (4%) | 2uL (4%) | 2uL (4%) | 2uL (4%) |
MgCl2 (50mM) | 1uL (1mM) | 1uL (1mM) | 1uL (1mM) | 1uL (1mM) |
Results
Gel pictures
Ran gels on yesterday's PCRs to create psB1C3 with USER endings.
Small gel:
- 1 kb ladder
- 2%, pur
- 4%, pur
- 5%, pur
- 4%, 1uL, pur
- 4%, 2uL, pur
- 1M, pur
- 2%, HQ
- 4%, HQ
- 5%, HQ
- 4%, 1uL, HQ
- 4%, 2uL, HQ
- 1M HQ
- 1 kb ladder (ladder was almost empty so I put another one in the next lane)
- 1 kb ladder
big gel (samples from touch down PCR):
- 1 kb ladder
- GC, HQ
- 2% HQ
- 4% HQ
- 5% HQ
- 4%, 1uL, HQ
- 4%, 2uL, HQ
- 1M HQ
- GC pur
- 2%, pur
- 4%, pur
- 5%, pur
- 4%, 1uL, pur
- 4%, 2uL, pur
- 1M pur
- neg
- 1 kb ladder
Conclusion
Navigate to the Previous or the Next Entry