From 2013.igem.org
{
"date" : "2013-07-01",
"author" : "emil",
"title" : " Re-screening, amplification and digestion(together with the two B. subtilis backbones) of the GFPs E0840 and E0240 ",
"content" : "I screened the three other sample of GFP(0840/2,0840/4,0240/1,0240/3) like in the\"> previous post with the following results:(the gel was run together with Girelli's sample, we are interested in the first 4 sample)
Gel orderSample | Well |
---|
BBa_E0840/2 | 2 |
BBa_E0840/4 | 3 |
BBa_E0240/1 | 4 |
BBa_E0240/3 | 5 |
Ladder 1kb Fermentas | 1 |
We can see 2 bands for each sample: the upper is the plasmid(pSB1A2 2079 bp), the lower is presumably the GFP(BBa_E0240 826 bp,BBa_E0840 828 bp)(prefix and suffix escluded)at 900 bp.Afterwards i have amplified 0.5 6micro;l of one of the 4 sample(E0840/4 475.9 ng/micro;l) following the
PCR protocol and exploiting the universal primers(prefix Forward,Suffix Reverse) with the following resuts(as usual I did a gel to verify the pcr):
Gel orderSample | Well |
---|
BBa_E0840/4 a | 2 |
BBa_E0840/4 b | 3 |
BBa_E0840/4 c | 4 |
Ladder 1kb Fermentas | 1 |
As we can see the pcr completed succesfully, there are the right bands at 900-1000 bp.Then I purified the pcr following the
purification protocol . After that I have quantified the product with the following results:
QuantificationSample | Quantification |
---|
BBa_E0840/4 a | 30.5ng/µl |
BBa_E0840/4 b | 44ng/µl |
BBa_E0840/4 c | 42.6ng/µl |
Finally I have digested o/n all the 48.5µl of b sample and of 2 sample of the backbone(K823026 359.7ng/µl,K823024 334.4ng/µl) with EcoR1-HF and Pst1 following the
digestion protocol. ",
"tags" : "K832024-K823026-E0840-E0240"
}