Template:Kyoto/Notebook/Aug 30
From 2013.igem.org
Contents |
Aug 30
Gel Extraction
Name | quantity | concentration[µg/mL] | 260/280 | 260/230 |
---|---|---|---|---|
PT181 atte(2) E+S | 305.3 | 2.2 | 1.66 | 0.36 |
PT181 atte(2) X+P | 217.7 | 3.9 | 1.73 | 0.04 |
PT181 anti(2) E+S | 347.7 | 3.1 | 1.88 | 0.31 |
PT181 anti(2) X+P | 376.5 | 5.9 | 0.49 | 2.36 |
PSBIC3 E+S | 436.6 | 30.7 | 1.03 | 1.28 |
PSBIC3 X+P | 457.4 | 7.9 | 1.65 | 0.42 |
Spinach E+S | 490.5 | 3.0 | 1.87 | 0.26 |
tetR aptamer 12-1R E+S | 451.7 | -12.8 | 5.56 | -0.04 |
Miniprep
DNA | concentration[µg/mL] | 260/280 | 260/230 |
---|---|---|---|
RBS-lysis2 9 | 264.6 | 1.97 | 2.21 |
RBS-lysis2 12 | 220.0 | 1.89 | 2.46 |
RBS-lysis2 14 | 195.3 | 1.88 | 1.53 |
Colony PCR
Sample | base pair |
---|---|
8/29 Pcon-RBS-GFP-DT-Pcon-RBS-luxR-DT(8/20 LB Amp) (1)~(4) | 2143 |
8/29 Plux-RBS-GFP-DT(8/27 LB-CP) (1)~(2) | 1227 |
8/29 Pbad-larac-RBS-RFP{BBaI13516} (8/21 LB-CP) (1)~(2) | 2256 |
8/29 RBS-lysis3-DT-(1) | 1210 |
PreDenature | Denature | Annealing | Extension | cycle |
---|---|---|---|---|
94°C | 94°C | 55°C | 68°C | -- |
5min | 30s | 30s | 2min | 30cycle |
Ethanol Precipitation
DNA |
---|
pT181 atte-(2) E+S |
pT181 atte-(2) X+P |
pT181 anti-(2) E+S |
pT181 anti-(2) X+P |
pSB1C3 E+S |
pSB1C3 X+P |
Spinach E+S |
tetR aptamer 12_1R E+S |
Restriction Enzyme Digestion
8/30 RBS-lysis2 (9) | EcoRI | SpeI | 10x bufferB | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 7.5 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 18.2 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/22 pSB1C3-(2) | EcoRI | SpeI | 10x Buffer | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 8 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 17.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 7.9 µL | 10 µL |
8/22 pSB1C3-(2) | XbaI | PstI | BufferD | BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 8 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 17.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 7.9 µL | 10 µL |
8/21 tRNA-Spinach (1) | EcoRI | SpeI | 10x BufferB | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 4 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 21.9 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/21 tetR aptamer 12_1R (1) | EcoRI | SpeI | 10xBufferB | 100xBSA | MilliQ | total | |
---|---|---|---|---|---|---|---|
2 cuts | 3 µL | 0.5 µL | 0.5 µL | 3 µL | 0.3 µL | 22.7 µL | 30 µL |
NC | 0.4 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/21 pT181 attenuator-(2) | EcoRI | SpeI | XbaI | PstI | 10x BufferB | 10x BufferD | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|---|---|---|
2 cuts | 4 µL | 0.5 µL | 0.5 µL | 0 µL | 0 µL | 3 µL | 0 µL | 0.3 µL | 21.7 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0 µL | 0.1 µL | 8.4 µL | 10 µL |
2 cuts | 4 µL | 0 µL | 0 µL | 0.5 µL | 0.5 µL | 0 µL | 3 µL | 0.3 µL | 21.7 µL | 30 µL |
NC | 0.5 µL | 0 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 8.4 µL | 10 µL |
8/21 pT181 antisense-(2) | EcoRI | SpeI | XbaI | PstI | 10x BufferB | 10x BufferD | 100x BSA | MilliQ | total | |
---|---|---|---|---|---|---|---|---|---|---|
2 cuts | 9 µL | 0.5 µL | 0.5 µL | 0 µL | 0 µL | 3 µL | 0 µL | 0.3 µL | 16.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0 µL | 0.1 µL | 7.9 µL | 10 µL |
2 cuts | 9 µL | 0 µL | 0 µL | 0.5 µL | 0.5 µL | 0 µL | 3 µL | 0.3 µL | 16.7 µL | 30 µL |
NC | 1 µL | 0 µL | 0 µL | 0 µL | 0 µL | 0 µL | 1 µL | 0.1 µL | 7.9 µL | 10 µL |