Team:SJTU-BioX-Shanghai/Notebook/Lab log/August
From 2013.igem.org
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Week1Construct Red Sensor plasmid.Plasmid is confirmed by sequencing. Transform pCDFDuet plasmid to DH5αin large scales for 24 hours. Extract the plasmid through miniprep. PCR to get cph8 sequence combined with promoter and terminator(adding restriction enzyme cutting sites, Xba I and Hind III). Digest pro-cph8-ter sequence and pCDFDuet with Xba I and Hind III, 6 hours. Purification pCDFDuet with gel extraction. Ligation and transformation. (3 hours, DH5α). Culturing overnight. Week2Construct Red Sensor plasmid.=Picking colonies and culturing 24 hours. Extract the plasmid through miniprep. Identification by PCR, using primers of cph8 and primers on pCDFDuet). Picking samples with positive results, identification by digestion(Xba I and Hind III). Sequencing results shows that promoter and terminator have been misconnected. Intended to shorten digestion time of Hind III. Week3Construct Red Sensor plasmid.PCR to get cph8 sequence combined with promoter and terminator. Digest pro-cph8-ter sequence and pCDFDuet with Xba I, 6 hours and Hind III, 1 hours. Purification pCDFDuet with gel extraction. Ligation and transformation. (3 hours, DH5α). Culturing overnight. Week4Construct Red Sensor plasmid.Picking colonies and culturing 24 hours. Extract the plasmid through miniprep. Identification by PCR, using primers of cph8 and primers on pCDFDuet). Picking samples with positive results, identification by digestion(Xba I and Hind III). We found that when plasmids duplicate in pCDFDuet, they could get higher concentration and purity only on longer than 12 hours. Intend to shorten culturing time.
Insert sgRNA which points to RFP in downstream of Ccas in opposite direction.
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