Team:Carnegie Mellon/Modeling

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<h1>Modeling</h1>
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<p> We developed two models, each of which characterizes our experimental system on a different scale. The intracellular model uses chemical kinetics to model transcription and translation of the KillerRed gene, maturation of KillerRed, and the photochemistry of superoxide radical production.
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The phage-host dynamics model examines the interactions between <i>E. coli<i> and $\lambda$ and characterizes the effect of KillerRed (or control mRFP) on the system.
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[[Team:Carnegie_Mellon/KRModel|<b>Model of KillerRed synthesis and superoxide production</b>]]
[[Team:Carnegie_Mellon/KRModel|<b>Model of KillerRed synthesis and superoxide production</b>]]

Revision as of 15:25, 27 September 2013

Killer Red






Modeling

We developed two models, each of which characterizes our experimental system on a different scale. The intracellular model uses chemical kinetics to model transcription and translation of the KillerRed gene, maturation of KillerRed, and the photochemistry of superoxide radical production. The phage-host dynamics model examines the interactions between E. coli and $\lambda$ and characterizes the effect of KillerRed (or control mRFP) on the system.



Model of KillerRed synthesis and superoxide production

Model of host-phage dynamics