Modeling

We have modeled several aspects of the project to answer some key questions about our project:

• Kinetic Model -- How long will it take to convert ammonia into nitrous oxide?
• Reactor Model -- How large a reactor will we need?
• Codon Optimization -- Will we need to codon optimize the Nitrosomonas europaea and Pseudomonas aeruginosa genes we are expressing in E. coli?
• Model of Periplasmic Contents for Hello World Pilot Project -- What fluorescence cross section will the cell have when we express GFP in the periplasm and RFP in the cytoplasm?
• Protein Models -- What are the structures of the proteins we are expressing in E. coli?