Team:DTU-Denmark/Notebook/23 July 2013

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==Main purpose==
==Main purpose==
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*ON culture of Colony PCR products of HAO and AMO from [[Team:DTU-Denmark/Notebook/19_July_2013#Colony_PCR| 19-07-2013]]
 
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*USER reaction of AMO and HAO with pZA21 (with native promoter).
 
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*RFP amplification in pZA21 using primers without promoter
 
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*PCR to amplify USER-compatible AMO and HAO fragments
 
==Who was in the lab==
==Who was in the lab==

Revision as of 19:40, 24 July 2013

22 July 2013

Contents

208


Main purpose


Who was in the lab

Gosia, Kristian, Henrike

Results

Verification gel

1% gel to verify our earlier PCR purifications

wells (in bracets position of the purification in the gene box):

  • 1: broad band ladder
  • 2: HAO extracted from N. europeae with flanking primers (A4)
  • 3: AMO extracted from N. europeae with flanking primers (A6)
  • 4: cycAX extracted from N. europeae with flanking primers (A5)
  • 5: Nir extracted from P. aeruginosa with flanking primers (A7)
  • 6: Nir extracted from P. aeruginosa with flanking primers (A8)
  • 7: Nir extracted from P. aeruginosa with flanking primers (B8)
  • 8: Nir extracted from P. aeruginosa with flanking primers (B9)
  • 9: pZA21 USER fragment, DpnI treated (F1)
  • 10: cycAX USER fragment (G1)
  • 11: AMO USER fragment (G2)
  • 12: HAO USER fragment (G3)
  • 13: Nir USER fragment (G4)
  • 14: AMO USER fragment (G5)
  • 15: 1kb plus ladder

2013-07-23 verification gel.jpg

colony PCR gel

1% gel to analyse yesterday's colony PCR

wells:

  • 1: 1 kb ladder
  • 2: HAO colony 1
  • 3: HAO colony 2
  • 4: RFP in pZA21 without promoter
  • 5: RFP in pZA21 without promoter
  • 6: AMO colony 3 (count starts from 3)
  • 7: AMO colony 4
  • 8: AMO colony 5
  • 9: AMO colony 6
  • 10: AMO colony 7
  • 11: AMO colony 8
  • 12: AMO colony 9
  • 13: AMO colony 10
  • break in the gel
  • 14: cycAX colony 1
  • 15: cycAX colony 2
  • 14: RFP colony 1
  • 14: RFP colony 2

2013-07-23 colony cyc rfp.jpg