Team:DTU-Denmark/Project

From 2013.igem.org

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[[File:Dtu-pathway-mutant1.png]]
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The first mutant incorporates AMO, HAO and two cytochromes c554 and cm552 from ''Nitrosomonas europaea'' (shown in blue).  AMO is a 3 subunit protein which converts ammonia to an intermediate called hydroxylamine (NH<sub>2</sub>OH).  HAO then converts the hydroxylamine to nitrite.  During this conversion process, cytochrome c554 accepts an electron from HAO, and then passes this electron on to ccm552.  The terminal electron acceptor in this chain is quinone.  AMO and ccm552 are embedded in the cytoplasmic membrane, and all other proteins in this process are found in the periplasm.   
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The first mutant incorporates AMO, HAO and two cytochromes c554 and cm552 from ''Nitrosomonas europaea'' (shown in blue).  AMO is a 3 subunit protein which converts ammonia (NH<sub>4</sub> to an intermediate called hydroxylamine (NH<sub>2</sub>OH).  HAO then converts the hydroxylamine to nitrite (NO<sub>2</sub><sup>-</sup>.  During this conversion process, cytochrome c554 accepts an electron from HAO, and then passes this electron on to ccm552.  The terminal electron acceptor in this chain is quinone.  AMO and ccm552 are embedded in the cytoplasmic membrane, and all other proteins in this process are found in the periplasm.   
[[File:Dtu-pathway-mutant2.png]]
[[File:Dtu-pathway-mutant2.png]]
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The second mutant incorporates the Nir region from ''Pseudomonas aeruginosa'' (shown in yellow).  NirS converts nitrite to nitric oxide (NO), while removing an electron from NirM.  The remainder of the Nir region is necessary for the synthesis of NirM, and so we have included these genes as well.  NOR, which is present natively in ''E. coli'', converts nitric oxide to nitrous oxide (N<sub>2</sub>O).  In contrast to ''N. europaea'', ''E. coli'' is not a nitrifying bacterium and so does not convert nitrous oxide into nitrogen to complete the denitrification process.
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The second mutant incorporates the Nir region from ''Pseudomonas aeruginosa'' (shown in yellow).   
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Revision as of 10:05, 29 September 2013

Project Description

Our project removes ammonia from waste water, and via two E. coli mutants, turns it into nitrous oxide.

Global demand for fixed nitrogen has increased to the point that half the human population now relies on chemical fertilizer to grow their food. While fertilizer is a requirement for modern life, runoff from overfertilized farmland can cause eutrophication. In the presence of abundant ammonia, algae overgrow and consume the much of the available oxygen in the water. This results in decreased biodiversity throughout the watershed. Within Europe, 53% of lakes are eutrophic.

Using two E. coli mutants built with genes from Nitrosomonas europaea and Pseudomonas aeruginosa, we provide a system to reverse nitrogen fixation. Our mutants consume ammonia and produce nitrous oxide, releases a sustainable source of energy when decomposed into nitrogen and oxygen. We also provide a prototype of a bioreactor that could be scaled up and deployed in the field to simultaneously clean the water and produce energy.

Details

Dtu-pathway-mutant1.png

The first mutant incorporates AMO, HAO and two cytochromes c554 and cm552 from Nitrosomonas europaea (shown in blue). AMO is a 3 subunit protein which converts ammonia (NH4 to an intermediate called hydroxylamine (NH2OH). HAO then converts the hydroxylamine to nitrite (NO2-. During this conversion process, cytochrome c554 accepts an electron from HAO, and then passes this electron on to ccm552. The terminal electron acceptor in this chain is quinone. AMO and ccm552 are embedded in the cytoplasmic membrane, and all other proteins in this process are found in the periplasm.

Dtu-pathway-mutant2.png

The second mutant incorporates the Nir region from Pseudomonas aeruginosa (shown in yellow). NirS converts nitrite to nitric oxide (NO), while removing an electron from NirM. The remainder of the Nir region is necessary for the synthesis of NirM, and so we have included these genes as well. NOR, which is present natively in E. coli, converts nitric oxide to nitrous oxide (N2O). In contrast to N. europaea, E. coli is not a nitrifying bacterium and so does not convert nitrous oxide into nitrogen to complete the denitrification process.