Team:HokkaidoU Japan/Notebook/RBS SD2,4,6-1C3-Replacement

From 2013.igem.org

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<h2>SD2, 4, 6-1C3 Replacement</h2>
<div class="workflow-container">
<div class="workflow-container">
   <ul class="steps">
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<li class="step"> <div class="step-tile"> <h2 class="step-title">Culture</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Wed Jul 17</time> </li> </ul> <div class="step-recipe"> 1C3 vector </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Thu Jul 18</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 100up 200dn<br> faild </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Mini-prep</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Thu Jul 18</time> </li> </ul> <div class="step-recipe"> 1C3 vector (7/17 cultured) </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Mon Jul 22</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 100up 200dn<br> faild </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Mon Jul 29</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 100up 200dn<br> faild </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Mon Jul 29</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 100up 200dn<br> SD2 faild </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Wed Jul 31</time> </li> </ul> <div class="step-recipe"> R0040-SD2-LacZ&alpha;-B0015 100up 200dn </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Digestion</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Wed Jul 31</time> </li> </ul> <div class="step-recipe"> Cut R0040-SD(2,4,6)-LacZ&alpha;-B0015 EcoRI and PstI (using 10&times;H buffer) </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Ligation</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sat Aug 3</time> </li> </ul> <div class="step-recipe"> Ligate R0040-SD(2,4,6)-LacZ&alpha;-B0015 with mini-preped 1C3 vector </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Transformation</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sat Aug 3</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3<br> each of 1&micro;L DNA to DH5&alpha;<br> faild<br> </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Transformation</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Wed Aug 7</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3<br> each of 1&micro;L DNA to DH5&alpha;<br> faild </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Fri Aug 9</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 100up 200dn </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Digestion</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sat Aug 10</time> </li> </ul> <div class="step-recipe"> Cut R0040-SD(2,4,6)-LacZ&alpha;-B0015 EcoRI and PstI (using 10&times;H buffer) </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Antarctic phophatase</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sun Aug 11</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Ligation</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sun Aug 11</time> </li> </ul> <div class="step-recipe"> Ligate R0040-SD(2,4,6)-LacZ&alpha;-B0015 with pSB1C3 vector </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Transformation</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Wed Aug 14</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3<br> each of 1&micro;L DNA to DH5&alpha; </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Colony PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Thu Aug 15</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3 </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Mini-prep</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Fri Aug 16</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3 </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Sequencing</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Mon Aug 19</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3<br> 100up 200dn<br> faild </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Sequencing</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Thu Aug 22</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3<br> 100up 200dn<br> faild </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">PCR</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Fri Aug 23</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 100up 200dn </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Digestion</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sun Aug 25</time> </li> </ul> <div class="step-recipe"> Cut R0040-SD(2,4,6)-LacZ&alpha;-B001 with EcoRI and PstI (using 10&times;H buffer) </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Antarctic phophatase</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sun Aug 25</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015<br> </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Ligation</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Sun Aug 25</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 with pSB1C3 vector </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Transformation</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Fri Aug 30</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3<br> each of 1&micro;L DNA to DH5&alpha; </div> </div> </div> </li>
 +
<li class="step"> <div class="step-tile"> <h2 class="step-title">Sequencing</h2> </div> <div class="step-detail"> <div class="step-detail-body"> <ul class="step-detail-trials"> <li> <time>Fri Sep 6</time> </li> </ul> <div class="step-recipe"> R0040-SD(2,4,6)-LacZ&alpha;-B0015 on pSB1C3<br> 100up 200dn </div> </div> </div> </li>
     <li class="step complete">
     <li class="step complete">
       <div class="step-tile"><h2>Complete!</h2></div>
       <div class="step-tile"><h2>Complete!</h2></div>

Latest revision as of 16:39, 27 September 2013

Maestro E.coli

Notebook

SD2, 4, 6-1C3 Replacement

  • Start

  • Culture

    1C3 vector
  • PCR

    R0040-SD(2,4,6)-LacZα-B0015 100up 200dn
    faild
  • Mini-prep

    1C3 vector (7/17 cultured)
  • PCR

    R0040-SD(2,4,6)-LacZα-B0015 100up 200dn
    faild
  • PCR

    R0040-SD(2,4,6)-LacZα-B0015 100up 200dn
    faild
  • PCR

    R0040-SD(2,4,6)-LacZα-B0015 100up 200dn
    SD2 faild
  • PCR

    R0040-SD2-LacZα-B0015 100up 200dn
  • Digestion

    Cut R0040-SD(2,4,6)-LacZα-B0015 EcoRI and PstI (using 10×H buffer)
  • Ligation

    Ligate R0040-SD(2,4,6)-LacZα-B0015 with mini-preped 1C3 vector
  • Transformation

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
    each of 1µL DNA to DH5α
    faild
  • Transformation

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
    each of 1µL DNA to DH5α
    faild
  • PCR

    R0040-SD(2,4,6)-LacZα-B0015 100up 200dn
  • Digestion

    Cut R0040-SD(2,4,6)-LacZα-B0015 EcoRI and PstI (using 10×H buffer)
  • Antarctic phophatase

    R0040-SD(2,4,6)-LacZα-B0015
  • Ligation

    Ligate R0040-SD(2,4,6)-LacZα-B0015 with pSB1C3 vector
  • Transformation

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
    each of 1µL DNA to DH5α
  • Colony PCR

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
  • Mini-prep

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
  • Sequencing

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
    100up 200dn
    faild
  • Sequencing

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
    100up 200dn
    faild
  • PCR

    R0040-SD(2,4,6)-LacZα-B0015 100up 200dn
  • Digestion

    Cut R0040-SD(2,4,6)-LacZα-B001 with EcoRI and PstI (using 10×H buffer)
  • Antarctic phophatase

    R0040-SD(2,4,6)-LacZα-B0015
  • Ligation

    R0040-SD(2,4,6)-LacZα-B0015 with pSB1C3 vector
  • Transformation

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
    each of 1µL DNA to DH5α
  • Sequencing

    R0040-SD(2,4,6)-LacZα-B0015 on pSB1C3
    100up 200dn
  • Complete!