Team:Northwestern/pcr

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Latest revision as of 00:38, 28 September 2013

PCR Amplification

To a small PCR tube (on ice) add:
  • enough water to fill to 50 ul (19 uL)
  • 1 ul of template DNA
  • 2.5 ul each of 10 uM forward and reverse primers
  • 25 ul of PCR Master Mix
Quickly transfer PCR tubes from ice to a preheated thermocycler with the following conditions:
  • initial denaturation: 94°C for 30 seconds
  • 25-35 cycles: 94°C for 15-30 seconds (we did 30 sec)
    • 45-68°C for 15-60 seconds (we did 60°C for 30 sec)
    • 68°C for 1min/kb (we did 2 min)
  • final extension: 68°C for 5 min
  • hold: 4°C for as long as necessary

NOTE: For colony PCR just add a single colony using a pipette tip as the last thing you add to the solution instead of the template DNA. Twirl the colony into the solution in the tube and then proceed as usual