Team:Penn/Project

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<img src="http://upload.wikimedia.org/wikipedia/en/d/d6/IGEM_official_logo.png" id="igem"/><!--igem logo-->
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<img src="http://collegediabetesnetwork.org/wp-content/uploads/2012/07/UPenn_logo1.png" id="penn"/> <!--penn logo-->
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            <b><center><h1>
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Project Description
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</b></center></h1>
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<br>
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The code of life is more than a sequence of A’s, C’s, T’s and G’s; epigenetic modifications, such as DNA methylation, are powerful and heritable regulators of gene expression. Targeted methyltransferases are enzymes that catalyze sequence-specific methylation – the most useful tool for engineering the epigenome. With a synthetic biology approach, we developed an assay to test targeted methyltransferases without expensive, time-consuming traditional methods. Our modular single-plasmid system allows methyltransferases to be easily cloned and tested via inexpensive digestion assays, quickly measuring the existence and extent of targeted methylation. Additionally, our plasmid contains standardized primer-binding sites for methylation-sensitive sequencing, and our E. coli chassis effectively eliminated noise associated with methylation studies. We are using this assay to characterize our novel targeted methyltransferases, which could be used to study epigenetic modifications. In the future, synthetic biologists could embrace these tools to explore the next frontier in engineering biological systems: the epigenome.</center>
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        <h4>Abstract</h4>
 
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  incididunt ut labore et dolore magna aliqua. Ut enim ad minim veniam, quis nostrud
 
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  exercitation ullamco laboris nisi ut aliquip ex ea commodo consequat. Duis aute irure dolor
 
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  in reprehenderit in voluptate velit esse cillum dolore eu fugiat nulla pariatur. Excepteur
 
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  incididunt ut labore et dolore magna aliqua. Ut enim ad minim veniam, quis nostrud
 
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  exercitation ullamco laboris nisi ut aliquip ex ea commodo consequat. Duis aute irure dolor
 
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  in reprehenderit in voluptate velit esse cillum dolore eu fugiat nulla pariatur. Excepteur
 
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  sint occaecat cupidatat non proident, sunt in culpa qui officia deserunt mollit anim id est laborum</p>
 
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  incididunt ut labore et dolore magna aliqua. Ut enim ad minim veniam, quis nostrud
 
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Latest revision as of 03:50, 28 September 2013

modeling

Project Description


The code of life is more than a sequence of A’s, C’s, T’s and G’s; epigenetic modifications, such as DNA methylation, are powerful and heritable regulators of gene expression. Targeted methyltransferases are enzymes that catalyze sequence-specific methylation – the most useful tool for engineering the epigenome. With a synthetic biology approach, we developed an assay to test targeted methyltransferases without expensive, time-consuming traditional methods. Our modular single-plasmid system allows methyltransferases to be easily cloned and tested via inexpensive digestion assays, quickly measuring the existence and extent of targeted methylation. Additionally, our plasmid contains standardized primer-binding sites for methylation-sensitive sequencing, and our E. coli chassis effectively eliminated noise associated with methylation studies. We are using this assay to characterize our novel targeted methyltransferases, which could be used to study epigenetic modifications. In the future, synthetic biologists could embrace these tools to explore the next frontier in engineering biological systems: the epigenome.

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Retrieved from "http://2013.igem.org/Team:Penn/Project"