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iGEM 2013: Team Tübingen

Project description

Contraceptive pills usually contain (among other active components) progestin (about 0.15 mg per pill). After the progestin has made its way through the female body the hormonal substance is excreted. The progestin carrying sewage water eventually reaches a sewage treatment plant where the sewage water is processed and the resulting purified water ends in a river. Unfortunately sewage treatment plants cannot eliminate hormonal substances from the water thus progestin accumulates in nearby rivers where the progestin-contaminated purified water mixes with river-water. Researchers have found mean progestin levels in sewage treatment plants of about 1 ng/L sewage water – in the river-water outside of one particular American sewage treatment plant 15 ng/L progestin was measured.

Fish can synthesize progestin themselves and use this hormone (similar to humans) for the regulation of sexual differentiation – one can assume that they have some kind of progestin-receptor. It has been shown in lab-studies that the specificity of these receptors is not very high since even very low concentrations of artificial progestins were able to induce responses when binding these receptors. Therefore it is quite possible that progestin-contaminated water can induce such responses under natural conditions as well – plus exaggerated progestin-concentrations might have unexpected effects.

Naturally progestin is secreted by female fish in order to induce the display of mating behavior in males. While displaying mating behavior males stop foraging, show increased activity, and similar expensive behavioral patterns. Contaminant progestin could induce this behavior at inopportune times thus increase predation risk and generally exhaust males. Additionally, contaminant progestin decreases sperm motility and disturbs spermatogenesis. Also, contaminant progestin disrupts embryonic development and induces masculinization in female fish (which in turn decreases clutch size). All in all progestin is highly dangerous for aquatic ecosystems and further decreases the chances of survival of small populations.

The effects of progestin and other so called endocrine disruptive substances (EDS) on aquatic life-forms have not been studied in depth until very recently and there are only few methods for measuring the progestin-concentration in water.

This lack of easy and quick measurement systems inspired us to develop a progestin measurement system based on yeast. Our system will employ progestin-receptors of Danio rerio and Xenopus laevis as precise detectors and firefly luciferase as an efficient reporter. We hope to at least be able to make qualitative measurements with our system (which will be possible without any additional equipment!) but our ultimate goal are precise quantitative measurements using a simple photometer. Since we have to produce most of the BioBricks we want to use ourselves we have no data about their performance. As a result we cannot easily predict successful BioBrick-combinations – as a way to counter possible erroneous predictions we have chosen a modular approach that enables us to simply replace inefficient parts with more fitting constructs in order to maximize overall performance.

In order to achieve quick and precise hormone-detection we utilize G-protein coupled membrane-receptors (Progesterin- and AdipoQ-Receptor family) which have relative low progestin-specificity thus might be able to respond to various (artificial) contaminant progestins. We decided to favor membrane-receptors over intracellular receptors because intracellular receptors tend to have longer lag-phases thus slow down the overall speed of our system. The first promotor in our system will be fet3 which is specifically inhibited by the membrane-receptors. Once progestin binds to the receptor the inhibition ceases thus downstream genes can be read by polymerase. Pfet3 regulates a repressor-gen (either mig1 or rox1) which is terminated by adh1. The repressor mig1 / rox1 inhibits the next promotor in our system: either anb1 or suc2 – in effect the repressor thus functions as an inverter for the receptor-signal. Panb1 / Psuc2 regulates the reporter-gen (preferably Luciferase – we develop lacZ as a substitute – we call our system “modular” for a reason!) which is terminated by adh1.

As said before we hope to construct a cost-efficient, easy-to-use, and quick measurement system for contaminant progestin in rivers or lakes. We will use the remaining time until October to maximize the usability of our system in order that only minimum staff-training is required before reliable quantitative measurements can be conducted.