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Team:UNITN-Trento/Notebook/Labposts/08/27
From 2013.igem.org
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{ | { | ||
| - | "date" : "2013-08- | + | "date" : "2013-08-12", |
| - | "author" : " | + | "author" : "thomas-viola", |
| - | "title" : " | + | "title" : "We don't give up!", |
| - | "content" : "<html> | + | "content" : "<html>Ok yesterday we discovered that the ligation between <a href=\"http://parts.igem.org/Part:BBa_S04617\">BBa_S04617</a> and <a href=\"http://parts.igem.org/Part:BBa_K1065002\">BBa_K1065002</a> failed so today we focused on a new cloning strategy. We decided to amplify both parts by PCR following <a href=\"https://2013.igem.org/Team:UNITN-Trento/Protocols#OneTaq-Phu-PCR\">this protocol</a>. BBa_Fwd and BBa_Rev primers were adopted. PCR products were then screened, purified and quantified at the nanodrop.. </html>{{:Team:UNITN-Trento/Templates/Styles/Spoiler|Gel image|<html><center><img src=\"https://static.igem.org/mediawiki/2013/3/36/Tn-2013_gel_PCR_s04617_K1065002.jpg\"></center></html>}}<html> As you can see from the picture, the gel confirmed our PCR reaction since in lane 1 there is a band at heigh of 1215 bp (BBa_K1065002) and in lane 3 one band at heigh of 1245 bp (BBa_S04617). Kapa universal ladder was adopted.We proceeded then performing an o/n digestion on the following parts in order to do a tri Assembly:<center><table><tr><th>Part</th><th>Enzymes used</th><th>quantification after purification</th></tr><tr><td>pSB1C3</td><td>EcorI+PstI</td><td>90.1 ng/µl</td></tr><tr><td>EFE+B0015</td><td>XbaI+PstI</td><td>104.7 ng/µl</td></tr><tr><td>s04617</td><td>EcorI+SpeI</td><td>133.5 ng/µl</td></tr></table></center>Tomorrow we will proceed with a ligation of the three digestion products..!</html>", |
| - | "tags" : " | + | "tags" : "pFixK-cI-pLambda-EFE" |
} | } | ||
Latest revision as of 09:10, 3 October 2013
{ "date" : "2013-08-12", "author" : "thomas-viola", "title" : "We don't give up!", "content" : "Ok yesterday we discovered that the ligation between BBa_S04617 and BBa_K1065002 failed so today we focused on a new cloning strategy. We decided to amplify both parts by PCR following this protocol. BBa_Fwd and BBa_Rev primers were adopted. PCR products were then screened, purified and quantified at the nanodrop..
As you can see from the picture, the gel confirmed our PCR reaction since in lane 1 there is a band at heigh of 1215 bp (BBa_K1065002) and in lane 3 one band at heigh of 1245 bp (BBa_S04617). Kapa universal ladder was adopted.We proceeded then performing an o/n digestion on the following parts in order to do a tri Assembly:![](\"https://static.igem.org/mediawiki/2013/3/36/Tn-2013_gel_PCR_s04617_K1065002.jpg\")
| Part | Enzymes used | quantification after purification |
|---|---|---|
| pSB1C3 | EcorI+PstI | 90.1 ng/µl |
| EFE+B0015 | XbaI+PstI | 104.7 ng/µl |
| s04617 | EcorI+SpeI | 133.5 ng/µl |
