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Template:Kyoto/Notebook/Sep 27
From 2013.igem.org
(Difference between revisions)
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!Lane||DNA||Enzyme | !Lane||DNA||Enzyme | ||
|- | |- | ||
| - | | | + | |1||100bp ladder||-- |
|- | |- | ||
| - | | || || | + | |3||Ptet||E+S |
| + | |- | ||
| + | |4||Ptet||E+S | ||
| + | |- | ||
| + | |5||Ptet||E+S | ||
| + | |} | ||
| + | [[File:igku_xxbeforexx.xxx]]<br> | ||
| + | [[File:igku_xxafterxx.xxx]]<br> | ||
| + | {| class="wikitable" | ||
| + | !Lane||DNA||Enzyme | ||
| + | |- | ||
| + | |1||1kbp ladder||-- | ||
| + | |- | ||
| + | |3||Pcon-antisense-aptamer-DT||X+P | ||
| + | |- | ||
| + | |4||Pcon-antisense-aptamer-DT||X+P | ||
| + | |- | ||
| + | |5||Pcon-antisense-aptamer-DT||X+P | ||
| + | |} | ||
| + | [[File:igku_xxbeforexx.xxx]]<br> | ||
| + | [[File:igku_xxafterxx.xxx]]<br> | ||
| + | {| class="wikitable" | ||
| + | !Lane||DNA||Enzyme | ||
| + | |- | ||
| + | |1||1kbp ladder||-- | ||
| + | |- | ||
| + | |3||RBS-GFP-DT||E+X | ||
| + | |- | ||
| + | |4||RBS-GFP-DT||E+X | ||
| + | |- | ||
| + | |5||RBS-GFP-DT||E+X | ||
| + | |- | ||
| + | |} | ||
| + | [[File:igku_xxbeforexx.xxx]]<br> | ||
| + | [[File:igku_xxafterxx.xxx]]<br> | ||
| + | {| class="wikitable" | ||
| + | !Lane||DNA||Enzyme | ||
| + | |- | ||
| + | |1||1kb ladder||-- | ||
| + | |- | ||
| + | |2||Pcon-attenuator||E+S | ||
| + | |- | ||
| + | |3||Pcon-attenuator||E+S | ||
| + | |- | ||
| + | |4||Pcon-attenuator||E+S | ||
| + | |- | ||
| + | |6||pSB4K5||E+P | ||
| + | |- | ||
| + | |7||pSB4K5||E+P | ||
| + | |- | ||
| + | |8||pSB4K5||E+P | ||
| + | |- | ||
| + | |10||RBS-GFP-DT||X+P | ||
| + | |- | ||
| + | |11||RBS-GFP-DT||X+P | ||
| + | |- | ||
| + | |12||RBS-GFP-DT||X+P | ||
|} | |} | ||
[[File:igku_xxbeforexx.xxx]]<br> | [[File:igku_xxbeforexx.xxx]]<br> | ||
Revision as of 06:27, 27 September 2013
Contents |
Sep 27
Gel Extraction
| Lane | DNA | Enzyme |
|---|---|---|
| 1 | 1kbp ladder | -- |
| 2 | pSB1C3 | EcoRI+SpeI |
| 3 | ||
| 4 | ||
| 6 | Pcon-attenuator-aptmer-DT | EcoRI+SpeI |
| 7 | ||
| 8 | ||
| 10 | Pcon-attenuator-aptmer-DT | EcoRI+SpeI |
| 11 | ||
| 12 |
File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx
| Name | concentration[µg/mL] | 260/280 | 260/230 |
|---|---|---|---|
| Pcon-attenuator-DT(EcoRI+SpeI) | 6.8 | 1.98 | 0.43 |
| pT181-attenuator(EcoRI+SpeI) | 7.5 | 1.84 | 0.06 |
| pSB1C3(EcoRI+SpeI) | 17.7 | 1.97 | 0.71 |
Gel Extraction
| Lane | DNA | Enzyme |
|---|---|---|
| （＞ω・）b | ||
File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx
| Name | concentration[µg/mL] | 260/280 | 260/230 |
|---|---|---|---|
| （´ω｀） | |||
| （ΦωΦ^） |
Electrophoresis
Gel Extraction
| Lane | DNA | Enzyme |
|---|---|---|
| 1 | 100bp ladder | -- |
| 3 | Ptet | E+S |
| 4 | Ptet | E+S |
| 5 | Ptet | E+S |
File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx
| Lane | DNA | Enzyme |
|---|---|---|
| 1 | 1kbp ladder | -- |
| 3 | Pcon-antisense-aptamer-DT | X+P |
| 4 | Pcon-antisense-aptamer-DT | X+P |
| 5 | Pcon-antisense-aptamer-DT | X+P |
File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx
| Lane | DNA | Enzyme |
|---|---|---|
| 1 | 1kbp ladder | -- |
| 3 | RBS-GFP-DT | E+X |
| 4 | RBS-GFP-DT | E+X |
| 5 | RBS-GFP-DT | E+X |
File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx
| Lane | DNA | Enzyme |
|---|---|---|
| 1 | 1kb ladder | -- |
| 2 | Pcon-attenuator | E+S |
| 3 | Pcon-attenuator | E+S |
| 4 | Pcon-attenuator | E+S |
| 6 | pSB4K5 | E+P |
| 7 | pSB4K5 | E+P |
| 8 | pSB4K5 | E+P |
| 10 | RBS-GFP-DT | X+P |
| 11 | RBS-GFP-DT | X+P |
| 12 | RBS-GFP-DT | X+P |
File:Igku xxbeforexx.xxx
File:Igku xxafterxx.xxx
| Name | concentration[µg/mL] | 260/280 | 260/230 |
|---|---|---|---|
| （´ω｀） | |||
| （ΦωΦ^） |
Liquid Culture
| Sample | medium |
|---|---|
| Pcon-GFP | Amp |
| RBS-GFP-DT | CP |
| Pcon-attenuator | Amp |
| Pcon-attenuator-aptamer-DT | Amp |
| Pcon-tetR-DT | Amp |
Ligation
| state | Vector | Inserter | Ligation High ver.2 | ||
|---|---|---|---|---|---|
| experiment | 9/17 pSB1C3 (E+S) 10.0ng/µL | 10µL | 9/26 pT181 attenuator(E+S) 7.5ng/µL | 1.3µL | 3.5 µL |
| experiment | 9/25 DT (E+X) 42.8ng/µL | 2.3µL | 9/22 Pcon-pT181 antisense(E+S) 46.7ng/µL | 1.5µL | 1.9 µL |
| experiment | 9/27 pSB4K5(E+P) 12.9ng/µL | 7.8µL | 9/10 Pcon-attenuator(E+S) 13.8ng/µL | 8.0µL | 3.5 µL |
| experiment | 9/27 pSB4K5(E+P) 12.9ng/µL | 7.8µL | 9/25 RBS-GFP-DT(X+P) 13.9ng/µL | 12µL | 3.5 µL |
| experiment | 9/8 pSB4K5 (E+S) 17.6ng/µL | xx µL | 8/21 Pcon-GFP-DT(E+S) 11ng/µL | 12.6µL | xx µL |
Liquid Culture
| Sample | medium |
|---|---|
| Pcon-spinach-DT | plusgrow Amp |
| Pcon-tetRaptamer-DT | plusgrow Amp |
| Pcon-antisense-spinach-DT | plusgrow Amp |
| spinach-DT | plusgrow CP |
RNA Extraction
| Name | concentration[µg/mL] | 260/280 | 260/230 |
|---|---|---|---|
| 9/26 Pcon-GFP-DT | 423.0 | 1.83 | 1.46 |
| 9/26 Pcon-GFP-DT K | 298.7 | 1.82 | 1.50 |
Electrophoresis
Miniprep
| DNA |
|---|
| Pcon-aptamer-DT |
| Pcon-spinach-DT |
| Pcon-antisense |
| Pcon-tetR-DT |
| Pcon-attenuator-DT |
| Pcon-antisense-spinach-DT |
Transformation
| Name1 | Name2 | Sample1(µL) | Sample2(µL) | Competent Cells(µL) | Total(µL) |
|---|---|---|---|---|---|
| Pcon-attenuator+RBS-GFP-DT(4K5) | Pcon-attenuator-DT(1A2) | 2 | 1 | 30 | 33 |
| Pcon-attenuator+RBS-GFP-DT(4K5) | Pcon-antisense-spinach-DT(1A2) | 2 | 1 | 30 | 33 |
| Pcon-attenuator+RBS-GFP-DT(4K5) | Pcon-tetR aptamer-DT(1A2) | 2 | 1 | 30 | 33 |
| Pcon-RBS-GFP-DT(4K5) | Pcon-attenuator-DT(1A2) | 2 | 1 | 30 | 33 |
| Pcon-RBS-GFP-DT(4K5) | Pcon-antisense-spinach-DT(1A2) | 2 | 1 | 30 | 33 |
| Pcon-RBS-GFP-DT(4K5) | Pcon-tetR aptamer-DT(1A2) | 2 | 1 | 30 | 33 |
| Pcon-attenuator+RBS-GFP-DT(4K5) | -- | 2 | -- | 20 | 22 |
| Pcon-RBS-GFP-DT(4K5) | -- | 2 | -- | 20 | 22 |
| attenuator(1C3) | -- | 2 | -- | 20 | 22 |
