Team:Groningen/Modeling/Heatmotility

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Contents

Heat Motility

The goal for our heat motility system is to obtain higher concentrations of silk in close proximity to the implant. This is achieved by immobilizing the silk producing bacteria once they are within some distance to the implant, which is enabled by integrating the the standard chemotaxis system with the DesK membrane fluidity sensor system. The result is that B. Subtilis stops moving when it is 37°C, and swims when it is 25°C. In our model we simulate the behaviour of these systems and, if necessary, implement biologically plausible modifications to make it feasible.


The chemotaxis system of B. subtilis


The CheV subsystem


The methylation subsystem


The CheC CheD subsystem


Exact adaption


Motility model


Homogenous and non-homogenous environments


CheC knockout


The effects of temperature


The DesK system


Demonstration

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Matlab code