Team:Bielefeld-Germany/Labjournal/Materials
From 2013.igem.org
Materials
Chloramphenicol stock solution
-Solubilize 20 mg mL-1 Chloramphenicol in 100 % Ethanol
-Store at -20 °C
DNA loading buffer
- 50 % (v/v) glycerol
- 1 mM EDTA
- 0.1 % (w/v) bromphenol blue
- Solve in ddH2O
LB medium
- 10 g Trypton
- 5 g yeast extract
- 10 g NaCl
- 12 g Agar-Agar (for plates)
- Adjust pH to 7.4
M9 medium
For 1 L M9 mineral medium you need 867 mL sterile water (for plates add 16 g Agar-Agar as well). Then add (in the following order:
- 300 µL 1 M CaCl2
1 M CaCl2 | 1 M CaCl2-H20 | 14.70 g/100 mL |
- 100 mL 5x M9 salt solution
10x M9 salt solution | |
---|---|
Na2HPO4-2H2O | 75.2 g/L |
KH2PO4 | 30 g/L |
NaCl | 5 g/L |
NH4Cl | 5 g/L |
- 20 % glucose
20 % Glucose | 20 % (w/v)glucose | 200 g/L |
For 500 mL stock solution add 100 g glucose to 440 mL water. Autoclave for 15 at 121° C
- 1 M MgSO4
MgSO4 | 1 M MgSO4-7H20 | 24.65 g/100 mL |
- 1 mL biotin (1 mg/mL)
Biotin (1 mg/mL) | biotin (1 mg/mL) | 50 mg/50 mL |
For 50 mL stock solution dissolve 50 mg biotin in 45 mL water. Add water to a final volume of 50 mL. Sterilize the solution over a 0.22-µm filter. Prepare 1 mL aliquots and store at -20°.
- 1 mL thiamin (1 mg/mL)
Thiamin (1 mg/mL) | thiamin-HCl (1 mg/mL) | 50 mg/50 mL |
For 50 mL stock solution dissolve 50 mg thiamin-HCl in 45 mL water. Add water to a final volume of 50 mL. Sterilize the solution over a 0.22-µm filter. Prepare 1 mL aliquots and store at -20°.
- 10 mL 100x trace elements solution
100x trace elements solution | EDTA | 5 g/L | 13.4 mM |
FeCl3-6H2O | 0.83 g/L | 3.1 mM | |
ZnCl2 | 84 mg/L | 0.62 mM | |
CuCl2-2H20 | 13 mg/L | 76 µM | |
CoCl2-H2O | 10 mg/L | 42 µM | |
H3BO3 | 10 mg/L | 162 µM | |
MnCl2-4H20 | 1.6 mg/L | 8.1 µM |
Dissolve 5g EDTA in 800 mL water and adjust the pH to 7.5 with NaOH. Then add the other components in the quantities mentioned below and add water to a final volume of 1L. Sterilize the solution over a 0.22µm filter
498 mg | FeCl3(anhydrous) | |
84 mg | ZnCl2 | |
765 µL | 0.1 M CuCl2-2H20 | 1.70 g/100 mL |
210 µL | 0.2 M CoCl2-H2O | 4.76 g/100 mL |
1.6 mL | 0.1 M H3BO3 | 0.62 g/100 mL |
8.1 µL | 1M MnCl2-4H20 | 19.8 g/100 mL |
SOC medium
Add the following components for 900 ml of distilled H2O:
- 20 g Trypton
- 5 g Bacto Yeast Extract
- 2 mL of 5 M NaCl
- 2.5 ml of 1 M KCl
- 10 ml of 1 M MgCl2
- 10 ml of 1 M MgSO4
- 20 ml of 1 M glucose
Adjust to 1L with distilled H2O. Sterilize by autoclaving.
Biotin 500x stock solution
- Dissolve 20 mg biotin in 100 mL of 0.05 M NaOH solution and filter sterilize
- Store at 4 °C
- Durable for one year
TAE buffer
For 1 L of 50 x TAE buffer you need:
- 242.48 g Tris
- 41.02 g Sodiumacetate
- 18.612 g EDTA
- Adjust pH to 7.8 with acetic acid
- Solve in dH2O
10 mL of the stock is diluted in 1 L dH2O for the gel electrophoresis (0.5 x TAE buffer)
Cold osmotic shock buffers for the release of periplasmic protein fraction
Cell fractionating buffer 1 (pH 8)
• 0.2 M Tris
• 200 g L -1 sucrose
• 0.1 M EDTA
Cell fractionating buffer 2.1 (pH 8)
• 0.01 M Tris
• 0.005 M MgSO4
Cell fractionating buffer 2.2 (pH 8)
• 0.01 M Tris
• 0.005 M MgSO4
• 1% Trition
• 2% SDS
Cell fractionating buffer 2.3 (pH 8)
• 0.01 M Tris
• 0.005 M MgSO4
• 1% Trition
• 0,2% SDS