Team:DTU-Denmark/Notebook

From 2013.igem.org

(Difference between revisions)
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===July===
===July===
 +
Week 27
 +
* Hello World project is successful.  From a cytoplasmic extraction, we have observed GFP in the periplasm and RFP in the cytoplasm. See a nice picture [[Team:DTU-Denmark/Notebook/6_July_2013|here.]]
* 2013-07-06 "Hello World" pilot project complete
* 2013-07-06 "Hello World" pilot project complete
 +
* Biolector experiment complete, initial data analysis complete. See some graphs [[Team:DTU-Denmark/ToxicityExperiment|here]]
-
* Week 27
+
Week 28
-
**Hello World project is successful.  From a cytoplasmic extraction, we have observed GFP in the periplasm and RFP in the cytoplasm. See a nice picture [[Team:DTU-Denmark/Notebook/6_July_2013|here.]]
+
* Made media and began growing ''Nitrosomonas'' culture
 +
* Designed, ordered and received primers to extract genes from ''Nitrosomonas'' and ''Pseudomonas''
 +
* Began work on cloning genes out of ''Nitrosomonas europaea'' and ''Pseudomonas aeruginosa''. All isolations successful except Nir.
-
** Biolector experiment complete, initial data analysis complete. See some graphs [[Team:DTU-Denmark/ToxicityExperiment|here]]
+
Week 29
-
** Made media and began growing ''Nitrosomonas'' culture
+
* Performed first nitrate -> nitrite experiment
-
** Designed, ordered and received primers to extract genes from ''Nitrosomonas'' and ''Pseudomonas''
+
 
 +
Week 30
 +
* Only have colonies for the cytochromes -- other genes do not give cultures
 +
* Will try to extract Nir gene in two pieces
 +
* Began work on arabinose inducible system
 +
 
 +
Week 31
 +
* Began work on Synthetic Promoter Library
 +
* BBQ with KU this Saturday
===August===
===August===
 +
 +
Week 32
 +
*
 +
 +
Week 33
 +
 +
Week 34
 +
 +
Week 35
===September===
===September===
 +
 +
Week 36
 +
 +
Week 37
 +
 +
Week 38
 +
 +
Week 39
 +
 +
=== October ===
 +
 +
Week 40
 +
* Wiki complete!
==Lab Book Entries==
==Lab Book Entries==

Revision as of 12:54, 28 September 2013

Notebook

Contents

Timeline

January

  • 2013-01-15 Budget completed
  • 2013-01-29 Human Practices: Workshop for highschool students

February

  • 2013-02-25 Project selected: Conversion of ammonia to nitrous oxide in E. coli

March

  • 2013-03-11 Biobrick workshop hosted for KU and SDU
  • 2013-03-13 Project kickoff meeting

April

  • 2013-04-15 Team contract signed
  • 2013-04-28 Human Practices: Outreach for highschool students

May

  • 2013-05-29 "Hello World" pilot project kicked off

June

  • 2013-06-04 Team competency mapping
  • 2013-06-09 Work on wiki started
  • 2013-06-29 Team BBQ

July

Week 27

  • Hello World project is successful. From a cytoplasmic extraction, we have observed GFP in the periplasm and RFP in the cytoplasm. See a nice picture here.
  • 2013-07-06 "Hello World" pilot project complete
  • Biolector experiment complete, initial data analysis complete. See some graphs here

Week 28

  • Made media and began growing Nitrosomonas culture
  • Designed, ordered and received primers to extract genes from Nitrosomonas and Pseudomonas
  • Began work on cloning genes out of Nitrosomonas europaea and Pseudomonas aeruginosa. All isolations successful except Nir.

Week 29

  • Performed first nitrate -> nitrite experiment

Week 30

  • Only have colonies for the cytochromes -- other genes do not give cultures
  • Will try to extract Nir gene in two pieces
  • Began work on arabinose inducible system

Week 31

  • Began work on Synthetic Promoter Library
  • BBQ with KU this Saturday

August

Week 32

Week 33

Week 34

Week 35

September

Week 36

Week 37

Week 38

Week 39

October

Week 40

  • Wiki complete!

Lab Book Entries

June
MTWTFSS
          [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/1_June_2013&action=edit 1] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/2_June_2013&action=edit 2]
[http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/3_June_2013&action=edit 3] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/4_June_2013&action=edit 4] [http://2013.igem.org/Team:DTU-Denmark/Notebook/5_June_2013 5] [http://2013.igem.org/Team:DTU-Denmark/Notebook/6_June_2013 6] [http://2013.igem.org/Team:DTU-Denmark/Notebook/7_June_2013 7] [http://2013.igem.org/Team:DTU-Denmark/Notebook/8_June_2013 8] [http://2013.igem.org/Team:DTU-Denmark/Notebook/9_June_2013 9]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/10_June_2013 10] [http://2013.igem.org/Team:DTU-Denmark/Notebook/11_June_2013 11] [http://2013.igem.org/Team:DTU-Denmark/Notebook/12_June_2013 12] [http://2013.igem.org/Team:DTU-Denmark/Notebook/13_June_2013 13] [http://2013.igem.org/Team:DTU-Denmark/Notebook/14_June_2013 14] [http://2013.igem.org/Team:DTU-Denmark/Notebook/15_June_2013 15] [http://2013.igem.org/Team:DTU-Denmark/Notebook/16_June_2013 16]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/17_June_2013 17] [http://2013.igem.org/Team:DTU-Denmark/Notebook/18_June_2013 18] [http://2013.igem.org/Team:DTU-Denmark/Notebook/19_June_2013 19] [http://2013.igem.org/Team:DTU-Denmark/Notebook/20_June_2013 20] [http://2013.igem.org/Team:DTU-Denmark/Notebook/21_June_2013 21] [http://2013.igem.org/Team:DTU-Denmark/Notebook/22_June_2013 22] [http://2013.igem.org/Team:DTU-Denmark/Notebook/23_June_2013 23]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/24_June_2013 24] [http://2013.igem.org/Team:DTU-Denmark/Notebook/25_June_2013 25] [http://2013.igem.org/Team:DTU-Denmark/Notebook/26_June_2013 26] [http://2013.igem.org/Team:DTU-Denmark/Notebook/27_June_2013 27] [http://2013.igem.org/Team:DTU-Denmark/Notebook/28_June_2013 28] [http://2013.igem.org/Team:DTU-Denmark/Notebook/29_June_2013 29] [http://2013.igem.org/Team:DTU-Denmark/Notebook/30_June_2013 30]
July
MTWTFSS
[http://2013.igem.org/Team:DTU-Denmark/Notebook/1_July_2013 1] [http://2013.igem.org/Team:DTU-Denmark/Notebook/2_July_2013 2] [http://2013.igem.org/Team:DTU-Denmark/Notebook/3_July_2013 3] [http://2013.igem.org/Team:DTU-Denmark/Notebook/4_July_2013 4] [http://2013.igem.org/Team:DTU-Denmark/Notebook/5_July_2013 5] [http://2013.igem.org/Team:DTU-Denmark/Notebook/6_July_2013 6] [http://2013.igem.org/Team:DTU-Denmark/Notebook/7_July_2013 7]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/8_July_2013 8] [http://2013.igem.org/Team:DTU-Denmark/Notebook/9_July_2013 9] [http://2013.igem.org/Team:DTU-Denmark/Notebook/10_July_2013 10] [http://2013.igem.org/Team:DTU-Denmark/Notebook/11_July_2013 11] [http://2013.igem.org/Team:DTU-Denmark/Notebook/12_July_2013 12] [http://2013.igem.org/Team:DTU-Denmark/Notebook/13_July_2013 13] [http://2013.igem.org/Team:DTU-Denmark/Notebook/14_July_2013 14]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/15_July_2013 15] [http://2013.igem.org/Team:DTU-Denmark/Notebook/16_July_2013 16] [http://2013.igem.org/Team:DTU-Denmark/Notebook/17_July_2013 17] [http://2013.igem.org/Team:DTU-Denmark/Notebook/18_July_2013 18] [http://2013.igem.org/Team:DTU-Denmark/Notebook/19_July_2013 19] [http://2013.igem.org/Team:DTU-Denmark/Notebook/20_July_2013 20] [http://2013.igem.org/Team:DTU-Denmark/Notebook/21_July_2013 21]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/22_July_2013 22] [http://2013.igem.org/Team:DTU-Denmark/Notebook/23_July_2013 23] [http://2013.igem.org/Team:DTU-Denmark/Notebook/24_July_2013 24] [http://2013.igem.org/Team:DTU-Denmark/Notebook/25_July_2013 25] [http://2013.igem.org/Team:DTU-Denmark/Notebook/26_July_2013 26] [http://2013.igem.org/Team:DTU-Denmark/Notebook/27_July_2013 27] [http://2013.igem.org/Team:DTU-Denmark/Notebook/28_July_2013 28]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/29_July_2013 29] [http://2013.igem.org/Team:DTU-Denmark/Notebook/30_July_2013 30] [http://2013.igem.org/Team:DTU-Denmark/Notebook/31_July_2013 31]
August
MTWTFSS
      [http://2013.igem.org/Team:DTU-Denmark/Notebook/1_August_2013 1] [http://2013.igem.org/Team:DTU-Denmark/Notebook/2_August_2013 2] [http://2013.igem.org/Team:DTU-Denmark/Notebook/3_August_2013 3] [http://2013.igem.org/Team:DTU-Denmark/Notebook/4_August_2013 4]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/5_August_2013 5] [http://2013.igem.org/Team:DTU-Denmark/Notebook/6_August_2013 6] [http://2013.igem.org/Team:DTU-Denmark/Notebook/7_August_2013 7] [http://2013.igem.org/Team:DTU-Denmark/Notebook/8_August_2013 8] [http://2013.igem.org/Team:DTU-Denmark/Notebook/9_August_2013 9] [http://2013.igem.org/Team:DTU-Denmark/Notebook/10_August_2013 10] [http://2013.igem.org/Team:DTU-Denmark/Notebook/11_August_2013 11]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/12_August_2013 12] [http://2013.igem.org/Team:DTU-Denmark/Notebook/13_August_2013 13] [http://2013.igem.org/Team:DTU-Denmark/Notebook/14_August_2013 14] [http://2013.igem.org/Team:DTU-Denmark/Notebook/15_August_2013 15] [http://2013.igem.org/Team:DTU-Denmark/Notebook/16_August_2013 16] [http://2013.igem.org/Team:DTU-Denmark/Notebook/17_August_2013 17] [http://2013.igem.org/Team:DTU-Denmark/Notebook/18_August_2013 18]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/19_August_2013 19] [http://2013.igem.org/Team:DTU-Denmark/Notebook/20_August_2013 20] [http://2013.igem.org/Team:DTU-Denmark/Notebook/21_August_2013 21] [http://2013.igem.org/Team:DTU-Denmark/Notebook/22_August_2013 22] [http://2013.igem.org/Team:DTU-Denmark/Notebook/23_August_2013 23] [http://2013.igem.org/Team:DTU-Denmark/Notebook/24_August_2013 24] [http://2013.igem.org/Team:DTU-Denmark/Notebook/25_August_2013 25]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/26_August_2013 26] [http://2013.igem.org/Team:DTU-Denmark/Notebook/27_August_2013 27] [http://2013.igem.org/Team:DTU-Denmark/Notebook/28_August_2013 28] [http://2013.igem.org/Team:DTU-Denmark/Notebook/29_August_2013 29] [http://2013.igem.org/Team:DTU-Denmark/Notebook/30_August_2013 30] [http://2013.igem.org/Team:DTU-Denmark/Notebook/31_August_2013 31]
September
MTWTFSS
            [http://2013.igem.org/Team:DTU-Denmark/Notebook/1_September_2013 1]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/2_September_2013 2] [http://2013.igem.org/Team:DTU-Denmark/Notebook/3_September_2013 3] [http://2013.igem.org/Team:DTU-Denmark/Notebook/4_September_2013 4] [http://2013.igem.org/Team:DTU-Denmark/Notebook/5_September_2013 5] [http://2013.igem.org/Team:DTU-Denmark/Notebook/6_September_2013 6] [http://2013.igem.org/Team:DTU-Denmark/Notebook/7_September_2013 7] [http://2013.igem.org/Team:DTU-Denmark/Notebook/8_September_2013 8]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/9_September_2013 9] [http://2013.igem.org/Team:DTU-Denmark/Notebook/10_September_2013 10] [http://2013.igem.org/Team:DTU-Denmark/Notebook/11_September_2013 11] [http://2013.igem.org/Team:DTU-Denmark/Notebook/12_September_2013 12] [http://2013.igem.org/Team:DTU-Denmark/Notebook/13_September_2013 13] [http://2013.igem.org/Team:DTU-Denmark/Notebook/14_September_2013 14] [http://2013.igem.org/Team:DTU-Denmark/Notebook/15_September_2013 15]
[http://2013.igem.org/Team:DTU-Denmark/Notebook/16_September_2013 16] [http://2013.igem.org/Team:DTU-Denmark/Notebook/17_September_2013 17] [http://2013.igem.org/Team:DTU-Denmark/Notebook/18_September_2013 18] [http://2013.igem.org/Team:DTU-Denmark/Notebook/19_September_2013 19] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/20_September_2013&action=edit 20] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/21_September_2013&action=edit 21] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/22_September_2013&action=edit 22]
[http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/23_September_2013&action=edit 23] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/24_September_2013&action=edit 24] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/25_September_2013&action=edit 25] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/26_September_2013&action=edit 26] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/27_September_2013&action=edit 27] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/28_September_2013&action=edit 28] [http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/29_September_2013&action=edit 29]
[http://2013.igem.org/wiki/index.php?title=Team:DTU-Denmark/Notebook/30_September_2013&action=edit 30]