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Team:Tsinghua-A/te
From 2013.igem.org
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<a class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse"><span class="icon-bar"></span><span class="icon-bar"></span><span class="icon-bar"></span> | <a class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse"><span class="icon-bar"></span><span class="icon-bar"></span><span class="icon-bar"></span> | ||
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| - | <h1 class="brand"><a href="2013.igem.org/Team:Tsinghua-A">Tsinghua-A</a></h1> | + | <h1 class="brand"><a href="https://2013.igem.org/Team:Tsinghua-A">Tsinghua-A</a></h1> |
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<li><a title="team" href="#ins">Instructors</a></li> | <li><a title="team" href="#ins">Instructors</a></li> | ||
<li><a title="projects" href="#stu">Students</a></li> | <li><a title="projects" href="#stu">Students</a></li> | ||
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| - | <section class="section | + | <section class="section blue"> |
<ul class="ch-grid"> | <ul class="ch-grid"> | ||
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<h4>Instructors</h4> | <h4>Instructors</h4> | ||
<div class="row"> | <div class="row"> | ||
| + | <p>Our instructors come from Bioinformatics Division & Center of Synthetic and Systems Biology, TNLIST in Tsinghua University.</p> | ||
<div class="span2 offset1 flyIn"> | <div class="span2 offset1 flyIn"> | ||
<div class="people"> | <div class="people"> | ||
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<h3>Xie Zhen</h3> | <h3>Xie Zhen</h3> | ||
<p> | <p> | ||
| - | + | Professor | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Wang Xiaowo</h3> | <h3>Wang Xiaowo</h3> | ||
<p> | <p> | ||
| - | + | Associate professor | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Wei Lei</h3> | <h3>Wei Lei</h3> | ||
<p> | <p> | ||
| - | + | Ph.D candidate | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Liao Weixi</h3> | <h3>Liao Weixi</h3> | ||
<p> | <p> | ||
| - | + | Ph.D candidate | |
</p> | </p> | ||
</div> | </div> | ||
| + | </br></br> | ||
</div> | </div> | ||
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<section id="stu" class="section"> | <section id="stu" class="section"> | ||
<div class="container"> | <div class="container"> | ||
| - | <h4>Students</h4> | + | <h4>Students and attributions</h4> |
<div class="row"> | <div class="row"> | ||
| + | <div> | ||
| + | <p>Synthetic biology is an interdiscipline which combines science and engineering. In order to solve the problems that might be encountered in our project, team members majoring in different disciplines were recruited. Twelve of us are undergraduate students from 4 different departments.</p></div> | ||
<div class="span2 offset1 flyIn"> | <div class="span2 offset1 flyIn"> | ||
<div class="people"> | <div class="people"> | ||
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<h3>Peng Shuguang</h3> | <h3>Peng Shuguang</h3> | ||
<p> | <p> | ||
| - | + | Wet Lab | |
</p> | </p> | ||
</div> | </div> | ||
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<div class="people"> | <div class="people"> | ||
<img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/3/37/Renxinying.jpg" alt="" /> | <img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/3/37/Renxinying.jpg" alt="" /> | ||
| - | <h3>Ren Xinying</h3> | + | <h3>Ren Xinying</br></h3> |
<p> | <p> | ||
| - | + | Modeling | |
</p> | </p> | ||
</div> | </div> | ||
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<div class="people"> | <div class="people"> | ||
<img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/6/6a/Wangsiyu.jpg" alt="" /> | <img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/6/6a/Wangsiyu.jpg" alt="" /> | ||
| - | <h3>Wang Siyu</h3> | + | <h3>Wang Siyu</br></h3> |
<p> | <p> | ||
| - | + | Wet Lab</br>Human Practice</br>Wiki design | |
</p> | </p> | ||
</div> | </div> | ||
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<div class="people"> | <div class="people"> | ||
<img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/5/5d/Caoyuchen.jpg" alt="" /> | <img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/5/5d/Caoyuchen.jpg" alt="" /> | ||
| - | <h3>Cao Yuchen</h3> | + | <h3>Cao Yuchen</br></h3> |
<p> | <p> | ||
| - | + | Wet Lab | |
</p> | </p> | ||
</div> | </div> | ||
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<div class="people"> | <div class="people"> | ||
<img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/0/00/Chenyanting.jpg" alt="" /> | <img class="team-thumb img-circle" src="https://static.igem.org/mediawiki/2013/0/00/Chenyanting.jpg" alt="" /> | ||
| - | <h3>Chen Yanting</h3> | + | <h3>Chen Yanting</br></h3> |
<p> | <p> | ||
| - | + | Wiki design</br></br> | |
</p> | </p> | ||
</div> | </div> | ||
</div> | </div> | ||
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<div class="span2 offset1 flyIn"> | <div class="span2 offset1 flyIn"> | ||
<div class="people"> | <div class="people"> | ||
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<h3>Li Weijia</h3> | <h3>Li Weijia</h3> | ||
<p> | <p> | ||
| - | + | Wet Lab | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Meng Xianzhu</h3> | <h3>Meng Xianzhu</h3> | ||
<p> | <p> | ||
| - | + | Wiki design | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Tang Qianlin</h3> | <h3>Tang Qianlin</h3> | ||
<p> | <p> | ||
| - | + | Wet Lab</br>Human Practice | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Wang Ying</h3> | <h3>Wang Ying</h3> | ||
<p> | <p> | ||
| - | + | Modeling | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Wei Yao</h3> | <h3>Wei Yao</h3> | ||
<p> | <p> | ||
| - | + | Wiki design</br> | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Zhang Wendong</h3> | <h3>Zhang Wendong</h3> | ||
<p> | <p> | ||
| - | + | Modeling | |
</p> | </p> | ||
</div> | </div> | ||
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<h3>Zhou Zhenxu</h3> | <h3>Zhou Zhenxu</h3> | ||
<p> | <p> | ||
| - | + | Wiki design</br>Wet Lab | |
</p> | </p> | ||
</div> | </div> | ||
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</div> | </div> | ||
</section> | </section> | ||
| - | |||
| - | |||
| - | |||
| - | |||
| + | <section id="col" class="section wood"> | ||
| + | <div class="container"> | ||
| + | <h4>Collaboration</h4> | ||
| + | <div class="row"> | ||
| + | |||
| + | <div> | ||
| + | |||
| + | <p> | ||
| + | In August, We were informed that the Nanjing-China team needed our help to build their model. Considering that the communication and collaboration is a truly important part of doing research of synthetic biology, we promised that we would help them. So, then, they sent us their documents about their circuit and the function they wanted to realize. Our team had a discussion and found something we didn’t understand, so we had a video conference with them to know more about their circuits and confirm those details that we need to build this model. | ||
| + | </br></br> | ||
| + | When we had finished a half of the formulation work, they came to our school to had a discussion with us. We showed them our work and asked for their suggestion and after that we confirmed more details and adjust a few equation. | ||
| + | </br></br> | ||
| + | After we listed all the equations, we tried to simplify them. And then we begin to bury ourselves in coding, using the Matlab tool. We set a map with some parameters and some cells, with the map and cells’ state we can get new data of each cell and with the new state and the old map we got a new map and refresh it. With the right method and code, the only thing we needed is the right parameters of those equations. After finished that, we got the result which met our expects. | ||
| + | </br></br> | ||
| + | Finally, we sent the code and equations to them and finished this work. | ||
| + | </br></br> | ||
| + | With collaboration, we have got many communications with those who have the same dream in synthetic biology and learnt so much from each other. | ||
| + | </br></br> | ||
| + | <a href="https://2013.igem.org/Team:Nanjing-China/model">click here to see Nanjing-China's model</a> | ||
| + | |||
| + | </p> | ||
| + | </div> | ||
| + | |||
| + | </div> | ||
| + | </div> | ||
</section> | </section> | ||
| - | + | ||
| + | |||
Latest revision as of 22:02, 27 September 2013
Instructors
Our instructors come from Bioinformatics Division & Center of Synthetic and Systems Biology, TNLIST in Tsinghua University.
Xie Zhen
Professor
Wang Xiaowo
Associate professor
Wei Lei
Ph.D candidate
Liao Weixi
Ph.D candidate
Students and attributions
Synthetic biology is an interdiscipline which combines science and engineering. In order to solve the problems that might be encountered in our project, team members majoring in different disciplines were recruited. Twelve of us are undergraduate students from 4 different departments.
Peng Shuguang
Wet Lab
Ren Xinying
Modeling
Wang Siyu
Wet LabHuman PracticeWiki design
Cao Yuchen
Wet Lab
Chen Yanting
Wiki design
Li Weijia
Wet Lab
Meng Xianzhu
Wiki design
Tang Qianlin
Wet LabHuman Practice
Wang Ying
Modeling
Wei Yao
Wiki design
Zhang Wendong
Modeling
Zhou Zhenxu
Wiki designWet Lab
Collaboration
In August, We were informed that the Nanjing-China team needed our help to build their model. Considering that the communication and collaboration is a truly important part of doing research of synthetic biology, we promised that we would help them. So, then, they sent us their documents about their circuit and the function they wanted to realize. Our team had a discussion and found something we didn’t understand, so we had a video conference with them to know more about their circuits and confirm those details that we need to build this model. When we had finished a half of the formulation work, they came to our school to had a discussion with us. We showed them our work and asked for their suggestion and after that we confirmed more details and adjust a few equation. After we listed all the equations, we tried to simplify them. And then we begin to bury ourselves in coding, using the Matlab tool. We set a map with some parameters and some cells, with the map and cells’ state we can get new data of each cell and with the new state and the old map we got a new map and refresh it. With the right method and code, the only thing we needed is the right parameters of those equations. After finished that, we got the result which met our expects. Finally, we sent the code and equations to them and finished this work. With collaboration, we have got many communications with those who have the same dream in synthetic biology and learnt so much from each other. click here to see Nanjing-China's model
