Team:Baskent Meds/Safety

From 2013.igem.org

(Difference between revisions)
(Prototype team page)
Line 1: Line 1:
-
<!-- *** What falls between these lines is the Alert Box!  You can remove it from your pages once you have read and understood the alert *** -->
 
-
 
<html>
<html>
-
<div id="box" style="width: 700px; margin-left: 137px; padding: 5px; border: 3px solid #000; background-color: #fe2b33;">
+
<head>
-
<div id="template" style="text-align: center; font-weight: bold; font-size: large; color: #f6f6f6; padding: 5px;">
+
   
-
This is a template page. READ THESE INSTRUCTIONS.
+
<title>Baskent_Meds IGEMwiki</title>
 +
<!--menu bar script-->
 +
    <script type="text/javascript" src="http://code.jquery.com/jquery-latest.min.js"></script>
 +
    <script type="text/javascript">
 +
        $(document).ready(function(){
 +
 
 +
$("ul.subnav").parent().append("<span></span>"); //Only shows drop down trigger when js is enabled - Adds empty span tag after ul.subnav
 +
 +
$("ul.topnav li span").click(function() { //When trigger is clicked...
 +
 +
//Following events are applied to the subnav itself (moving subnav up and down)
 +
$(this).parent().find("ul.subnav").slideDown('fast').show(); //Drop down the subnav on click
 +
 
 +
$(this).parent().hover(function() {
 +
}, function(){
 +
$(this).parent().find("ul.subnav").slideUp('slow'); //When the mouse hovers out of the subnav, move it back up
 +
});
 +
 
 +
//Following events are applied to the trigger (Hover events for the trigger)
 +
}).hover(function() {
 +
$(this).addClass("subhover"); //On hover over, add class "subhover"
 +
}, function(){ //On Hover Out
 +
$(this).removeClass("subhover"); //On hover out, remove class "subhover"
 +
});
 +
 
 +
});
 +
/*menu bar script*/
 +
    </script>
 +
 +
 
 +
<style>
 +
/*menubar css*/
 +
 
 +
body
 +
{
 +
margin-left:20px;
 +
margin-right:20px;
 +
padding:0;
 +
font:10px normal Arial, Helvetica, sans-serif;
 +
background: #fff url("http://mail.baskent.edu.tr/mail/igem/scriptler/menubar/body_bg.gif") repeat-x;
 +
background-color: #FFFFFF;
 +
}
 +
ul.topnav
 +
{
 +
padding:0 20px;
 +
margin:0;
 +
float:left;
 +
width:934px;
 +
background:#222;
 +
font-size:1.2em;
 +
background:url("https://static.igem.org/mediawiki/2012/1/1b/Topnav_bg.gif") repeat-x;
 +
}
 +
ul.topnav li
 +
{
 +
float:left;
 +
list-style-type:none;
 +
margin:0;
 +
padding:0 15px 0 0;
 +
position:relative; /*--Declare X and Y axis base--*/
 +
}
 +
ul.topnav li a
 +
{
 +
padding:10px 5px;
 +
color:#fff;
 +
display:block;
 +
text-decoration:none;
 +
float:left;
 +
}
 +
ul.topnav li a:hover
 +
{
 +
background:url("https://static.igem.org/mediawiki/2012/f/f5/Topnav_hover.gif") no-repeat center top;
 +
}
 +
ul.topnav li span
 +
{
 +
/*--Drop down trigger styles--*/
 +
width:17px;
 +
height:35px;
 +
float:left;
 +
background:url("https://static.igem.org/mediawiki/2012/4/45/Subnav_btn.gif") no-repeat center top;
 +
}
 +
ul.topnav li span.subhover
 +
{
 +
/*--Hover effect for trigger--*/
 +
background-position:
 +
center bottom;
 +
cursor: pointer;
 +
}
 +
ul.topnav li ul.subnav
 +
{
 +
list-style:none;
 +
position:absolute; /*--Important - Keeps subnav from affecting main navigation flow--*/
 +
left:0;
 +
top:35px;
 +
background:#333;
 +
margin:0;
 +
padding:0;
 +
display:none;
 +
float:left;
 +
width:170px;
 +
-moz-border-radius-bottomleft:5px;
 +
-moz-border-radius-bottomright:5px;
 +
-webkit-border-bottom-left-radius:5px;
 +
-webkit-border-bottom-right-radius:5px;
 +
border:1px solid #111;
 +
}
 +
ul.topnav li ul.subnav li
 +
{
 +
margin:0;
 +
padding:0;
 +
border-top:1px solid #252525; /*--Creates bevel effect--*/
 +
border-bottom:1px solid #444; /*--Creates bevel effect--*/
 +
clear:both;
 +
width:170px;
 +
}
 +
html ul.topnav li ul.subnav li a
 +
{
 +
float:left;
 +
width:145px;
 +
background:#333 url("https://static.igem.org/mediawiki/2012/4/4b/Dropdown_linkbg.gif") no-repeat 10px center;
 +
padding-left:20px;
 +
}
 +
html ul.topnav li ul.subnav li a:hover
 +
{
 +
/*--Hover effect for subnav links--*/
 +
background:#222 url("https://static.igem.org/mediawiki/2012/4/4b/Dropdown_linkbg.gif") no-repeat 10px center;  
 +
}
 +
/*menu bar css*/
 +
.style2 {
 +
font-family: "Gill Sans MT", Helvetica;
 +
font-size: 18px;
 +
}
 +
.style8 {font-size: 24px}
 +
.style9 {font-size: 20px; }
 +
.style10 {font-size: 18px; }
 +
 
 +
 
 +
<!-- css ayar çekmece
 +
#mediawiki {
 +
display:none;
 +
}
 +
 
 +
#global {
 +
display: none
 +
}
 +
 
 +
//mediawiki altbannerını ve üstteki kullanıcı panellerini kapatıyor
 +
.noprint {
 +
display: none
 +
}
 +
 
 +
#search-controls.noprint { display: none }
 +
 
 +
/*.mediawiki { display: none }*/
 +
#p-logo { display: none }
 +
.globalWrapper { display: none }
 +
.top-section { display: none }
 +
#footer-box { display: none }
 +
.search-controls { display: none }
 +
#catlinks { display: none }
 +
#top { display: none }
 +
-->
 +
</style>
 +
 
 +
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"></head>
 +
<body>
 +
 
 +
<div id="ana" style="position:absolute; left:-24px; top:-100px; width:1000px; height:1100px; z-index:1; background-color: #FFFFFF; layer-background-color: #FFFFFF; border: 1px none #000000;">
 +
<div id="menubar" style="position:absolute; left:25px; top:16px; width:1000px; height:200px; z-index:1">
 +
 
 +
 
 +
<!--menu bar basladi -->
 +
 
 +
<ul class="topnav">
 +
<li><a href="/Team:Baskent_Meds" title="BaskentMeds main page">Home</a></li>
 +
 
 +
 
 +
<li>
 +
<a href="/Team:Baskent_Meds/Project" title="Our Project Abstract">Project</a>
 +
</li>
 +
<li><a href="/Team:Baskent_Meds/Notebook" title="Our Beloved Notebook!">Notebook</a></li>
 +
<li><a href="/Team:Baskent_Meds/Results" title="Still Working on this">Results</a></li>
 +
 
 +
<li><a href="/Team:Baskent_Meds/Gallery" title="">Human Practice</a></li>
 +
 
 +
<li>
 +
<a href="/Team:Baskent_Meds/Team" title="Shall we meet?">Team</a>
 +
 
 +
<ul class="subnav">
 +
<li><a href="/Team:Baskent_Meds/Instructors" title="Our ">Instructors</a></li>
 +
<li><a href="/Team:Baskent_Meds/Advisor" title="AdVisor">Advisor</a></li>
 +
<li><a href="/Team:Baskent_Meds/Students" title="Us">Student Members</a></li>
 +
 
 +
</ul>
 +
 
 +
</li>
 +
 
 +
</ul>
 +
<br><br><br>
 +
<!-- menubar bitti-->
 +
 
 +
 
</div>
</div>
-
<div id="instructions" style="text-align: center; font-weight: normal; font-size: small; color: #f6f6f6; padding: 5px;">
 
-
You are provided with this team page template with which to start the iGEM season.  You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples <a href="https://2008.igem.org/Help:Template/Examples">HERE</a>.
 
-
</div>
 
-
<div id="warning" style="text-align: center; font-weight: bold; font-size: small; color: #f6f6f6; padding: 5px;">
 
-
You <strong>MUST</strong>  have all of the pages listed in the menu below with the names specified.  PLEASE keep all of your pages within your teams namespace. 
 
-
</div>
 
-
</div>
 
-
</html>
 
-
<!-- *** End of the alert box *** -->
 
-
{| style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" bordercolor="#fff" width="62%" align="center"
 
-
!align="center"|[[Team:Baskent_Meds|Home]]
 
-
!align="center"|[[Team:Baskent_Meds/Team|Team]]
 
-
!align="center"|[https://igem.org/Team.cgi?year=2013&team_name=Baskent_Meds Official Team Profile]
 
-
!align="center"|[[Team:Baskent_Meds/Project|Project]]
 
-
!align="center"|[[Team:Baskent_Meds/Parts|Parts Submitted to the Registry]]
 
-
!align="center"|[[Team:Baskent_Meds/Modeling|Modeling]]
 
-
!align="center"|[[Team:Baskent_Meds/Notebook|Notebook]]
 
-
!align="center"|[[Team:Baskent_Meds/Safety|Safety]]
 
-
!align="center"|[[Team:Baskent_Meds/Attributions|Attributions]]
 
-
|}
 
-
Use this page to answer the questions on the [[Safety | safety page]].
+
<br />
 +
<br />
 +
<div id="la'book" class="style2" style="position:absolute; left:25px; top:165px; width:1000px; height:274px; z-index:1; overflow: visible;">
 +
  <div id="gecher" style="position:absolute; left:2px; top:0px; width:970px; height:468px; z-index:1">
 +
    <p align="left"><strong>Transformation of Escherichia coli In Order To Develop Legionella pneumophila Sensing Bacteria </strong></p><br>
 +
 
 +
    <p align="left"><strong>Risks to the safety and health of the members or other working in the lab?</strong></p></br>
 +
<p>Although we use Legionella pneumophila genes, we work on microorganisms with biosafety risk leve1. In addition our experiments are performed inside a laminar flow cabinet to reduce the risk. We are always wearing lab coats, gloves and googles while working in the lab.</p>
 +
 
 +
<p align="left"><strong>Risks to the safety and health of the general public, if released by design or by accident?</strong></p></br>
 +
<p>E.coli (risk level 1) are already present in our environment and also they have low pathogenicity, so bacteriae we experiment on would not cause additional risk if such an event occurs.</p>
 +
 
 +
<p align="left"><strong>Risks to environment, if released by design or by accident?</strong></p></br>
 +
<p>E.coli (risk level 1) is already present in our environment as explained above. Our modifications to E.coli cells do not increase pathogenicity of cells. Because we do not transfer any genes encoding virulence factors or any proteins associated to pathogenicity of E.coli
 +
 
 +
<p align="left"><strong>Risks to security though macilious misuse by individuals, groups or countries?</strong></p></br>
 +
<p>Such a situation would not increase the risk level of the strains used.
 +
 
 +
<p align="left"><strong>if your project moved from a small-scale lab study to become widely used as a commercial/industrial product, what new risks might arise? </strong></p></br>
 +
<p>The knowledge we generate, is not expected to be harmfull for the environment or human health. Our methods are to detect Legionella pneumophilla, so we think our method won’t cause a risk for humans. On the other hand, our product in a plasmid vector, that is always possible to use it for different aims.
 +
 
 +
<p align="left"><strong>does your project include any design features to address safety risks?</strong></p></br>
 +
<p>We cloned L.pneumophila’s autoinducer gene to E.coli and producer L.pneumophila mimicking E.coli. so we aim to observe the response our processed QS wsith by using the transformed E.coli producing Legionella autoinducers instead of the actual L.pneumophila cells.
 +
 
 +
<p align="left"><strong>what safety have you received?</strong></p></br>
 +
<p>We received biosafety course during phase 1 of the Medical School. In addition, we also received biosafety training before the experiments. In this context we learned chemical and biological hazardous material and using these substances during experiments
 +
Unfortunately our institute does not have online biosafety guidelines. We use National Biosafety Guidelines.
 +
 
 +
<p align="left"><strong>Does your institution have an institutional Biosafety Committee, or an equivalent group?</strong></p></br>
 +
<p>We have our Başkent University Institutional Review Board and Ethics Committee evaluating the scientific and ethical legal and social issues of any project sumitted. This study was approved by this Committee(DA13/06)
 +
 
 +
<p align="left"><strong>Does your country have national biosafety regulations or guidelines?</strong></p></br>
 +
<p>http://www.tbbdm.gov.tr/en/Home.aspx</p>
 +
 
 +
<p align="left"><strong>according to the WHO Biosafety Manual, what is the BioSafety Level rating of your lab?</strong></p></br>
 +
<p>Level2. Our laboratory’s BSL rating is above the risks caused by biomaterials we use. Also we run our experiments inside a laminar flow cabinet.</p>
 +
 
 +
<div id="Our Proudly Sponsors" class="style2" align="center">
 +
      </br>
 +
</br>
 +
</br>
 +
<p><strong>Our Sponsors</strong></p>
 +
<a href="http://www.baskent.edu.tr" title="Başkent Üniversitesi"><img src="https://static.igem.org/mediawiki/2013/3/30/Baskentlogo.gif" width="100" height="90" ></a><a href = "http://www.tubitak.gov.tr" title="TÜBİTAK"><img src="https://static.igem.org/mediawiki/2013/b/bf/Tubitaklogo.jpg" width="100" height="90"></a><a href = "http://www.home.agilent.com/agilent/home.jspx?lc=eng&cc=TR" title="Agilent Türkiye"><img src="https://static.igem.org/mediawiki/2013/c/c3/Aglientsmszw.png" width="100" height="90"></a>
 +
</br>
 +
</br>
 +
</br></div>
 +
</div>

Revision as of 20:41, 4 September 2013

Baskent_Meds IGEMwiki



Transformation of Escherichia coli In Order To Develop Legionella pneumophila Sensing Bacteria


Risks to the safety and health of the members or other working in the lab?


Although we use Legionella pneumophila genes, we work on microorganisms with biosafety risk leve1. In addition our experiments are performed inside a laminar flow cabinet to reduce the risk. We are always wearing lab coats, gloves and googles while working in the lab.

Risks to the safety and health of the general public, if released by design or by accident?


E.coli (risk level 1) are already present in our environment and also they have low pathogenicity, so bacteriae we experiment on would not cause additional risk if such an event occurs.

Risks to environment, if released by design or by accident?


E.coli (risk level 1) is already present in our environment as explained above. Our modifications to E.coli cells do not increase pathogenicity of cells. Because we do not transfer any genes encoding virulence factors or any proteins associated to pathogenicity of E.coli

Risks to security though macilious misuse by individuals, groups or countries?


Such a situation would not increase the risk level of the strains used.

if your project moved from a small-scale lab study to become widely used as a commercial/industrial product, what new risks might arise?


The knowledge we generate, is not expected to be harmfull for the environment or human health. Our methods are to detect Legionella pneumophilla, so we think our method won’t cause a risk for humans. On the other hand, our product in a plasmid vector, that is always possible to use it for different aims.

does your project include any design features to address safety risks?


We cloned L.pneumophila’s autoinducer gene to E.coli and producer L.pneumophila mimicking E.coli. so we aim to observe the response our processed QS wsith by using the transformed E.coli producing Legionella autoinducers instead of the actual L.pneumophila cells.

what safety have you received?


We received biosafety course during phase 1 of the Medical School. In addition, we also received biosafety training before the experiments. In this context we learned chemical and biological hazardous material and using these substances during experiments Unfortunately our institute does not have online biosafety guidelines. We use National Biosafety Guidelines.

Does your institution have an institutional Biosafety Committee, or an equivalent group?


We have our Başkent University Institutional Review Board and Ethics Committee evaluating the scientific and ethical legal and social issues of any project sumitted. This study was approved by this Committee(DA13/06)

Does your country have national biosafety regulations or guidelines?


http://www.tbbdm.gov.tr/en/Home.aspx

according to the WHO Biosafety Manual, what is the BioSafety Level rating of your lab?


Level2. Our laboratory’s BSL rating is above the risks caused by biomaterials we use. Also we run our experiments inside a laminar flow cabinet.




Our Sponsors