09/09/13
From 2013.igem.org
(Difference between revisions)
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|TOD X6||31.7||70.5||1.88||1.88 | |TOD X6||31.7||70.5||1.88||1.88 | ||
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|TOD F1||32.4||39.6||1.91||1.59 | |TOD F1||32.4||39.6||1.91||1.59 | ||
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|TOD F6||38||59.4||1.89||1.61 | |TOD F6||38||59.4||1.89||1.61 | ||
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+ | |TOB G1||36.8||72.5||1.89||1.51 | ||
+ | |- | ||
+ | |TOB G2||44.7||1.90||1.90||1.65 | ||
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+ | |TOB G3||33.7||50.2||1.90||1.46 | ||
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+ | |TOB G4||41.9||55||1.93||1.35 | ||
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+ | |TOB G5||34||43||1.96||1.54 | ||
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+ | |TOB G6||35||48||1.89||1.72 | ||
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|} | |} | ||
Revision as of 16:42, 9 September 2013
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Miniprep of overnight broth
- Following on from 06/09/13 result,overnight broth was prepared yesterday from the single colonies that had grown on each of the 2 plates shown on 06/09/13.
- The broth, which contains cells that have been transformed with pSB1C3/TOD genes, was minipreped using the Omega Bio-Tek kit.
- This would enable us to confirm which cells have the recircularised plasmid and those with the ligated product.
Measurement of DNA concentration
Samples | Volume (ul) | Conc (ng/ul) | 280/260 | 260/280 |
TOD X1 | 31.6 | 86.5 | 1.87 | 1.92 |
TOD X2 | 31.7 | 58.7 | 1.89 | 1.26 |
TOD X3 | 32.7 | 56.6 | 1.91 | 1.88 |
TOD X4 | 31.6 | 55.8 | 1.88 | 1.65 |
TOD X5 | 31.7 | 44.4 | 1.87 | 1.78 |
TOD X6 | 31.7 | 70.5 | 1.88 | 1.88 |
TOD F1 | 32.4 | 39.6 | 1.91 | 1.59 |
TOD F2 | 33.7 | 49.4 | 1.91 | 1.65 |
TOD F3 | 32.3 | 47.4 | 1.89 | 1.71 |
TOD F4 | 31.6 | 43.7 | 1.94 | 1.73 |
TOD F5 | 36.5 | 57 | 1.89 | 1.50 |
TOD F6 | 38 | 59.4 | 1.89 | 1.61 |
TOB G1 | 36.8 | 72.5 | 1.89 | 1.51 |
TOB G2 | 44.7 | 1.90 | 1.90 | 1.65 |
TOB G3 | 33.7 | 50.2 | 1.90 | 1.46 |
TOB G4 | 41.9 | 55 | 1.93 | 1.35 |
TOB G5 | 34 | 43 | 1.96 | 1.54 |
TOB G6 | 35 | 48 | 1.89 | 1.72 |
Double Digestion of pSB1C3/TOD genes
- The pSB1C3/TOD genes were double digested with (XbaI and SpeI) & (EcoRI and PstI)
- The master mix for the (XbaI and SpeI) was;
60ul of cut smart buffer 5ul of XbaI 10ul of SpeI 273ul of 5M Tris
- The master mix for the (EcoRI and PstI) was;
60ul of cut smart buffer 5ul of XbaI 5ul of SpeI 278ul of 5M Tris
All 36 tubes were incubated overnight in 37 degrees room.
- Tomorrow the plasmids that were isolated from the miniprep would be run on a 1% agarose gel to distinguish between cells that have the pSB1C3/TOD genes from those that have the recircularised pSB1C3 vector.