Team:XMU Software/Requirements

From 2013.igem.org

(Difference between revisions)
(Created page with "<html> <head> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <script src="http://ajax.googleapis.com/ajax/libs/jquery/1.8.0/jquery.min.js"></script> <sc...")
Line 4: Line 4:
<script src="http://ajax.googleapis.com/ajax/libs/jquery/1.8.0/jquery.min.js"></script>
<script src="http://ajax.googleapis.com/ajax/libs/jquery/1.8.0/jquery.min.js"></script>
<script type="text/javascript" async="" src="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/js&action=raw&amp;ctype=text/javascript"></script>
<script type="text/javascript" async="" src="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/js&action=raw&amp;ctype=text/javascript"></script>
-
<script type="text/javascript" async="" src="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/Project/js&action=raw&amp;ctype=text/javascript"></script>
+
<script type="text/javascript" async="" src="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/Requirements/js&action=raw&amp;ctype=text/javascript"></script>
<link rel="stylesheet" type="text/css" href="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/css&action=raw&amp;ctype=text/css"/>
<link rel="stylesheet" type="text/css" href="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/css&action=raw&amp;ctype=text/css"/>
-
<link rel="stylesheet" type="text/css" href="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/Project/css&action=raw&amp;ctype=text/css"/>
+
<link rel="stylesheet" type="text/css" href="https://2013.igem.org/wiki/index.php?title=Team:XMU_Software/Requirements/css&action=raw&amp;ctype=text/css"/>
</head>
</head>
<body>
<body>
Line 38: Line 38:
</div>
</div>
 +
<div id="medals"><a name="_medals" id="_medals"></a>
 +
<div id="medals_m1">
 +
<img src="https://static.igem.org/mediawiki/2013/5/50/%E6%A0%87%E9%A2%98%E6%A0%8F.png" width="1348px" class="sep_photo">
 +
<div class="sep_title">Medals</div>
 +
</div>
 +
 +
<div id="medals_m2">
 +
</br>
 +
<div id="medals_gold">
 +
<h1><img src="https://static.igem.org/mediawiki/2013/e/ee/Xmusoftware_Gold.png">&nbsp;&nbsp;&nbsp;Gold Medal</h1>
 +
<p>To earn a Gold Medal, in addition to the Silver Medal requirements, a team must:</p>
 +
<h3>1.Have another team utilized the software developed by your team. You must clearly show how your software was used and the results that were obtained? </h3>
 +
<p>XMU-China used our software to kee their experimental records and put them <a href="https://2013.igem.org/Team:XMU-China/wetlab_journal" target="_blank">on their wiki.</a></p>
 +
<h3>2a. Outline and detail how your software effects Human Practices in Synthetic Biology. Such topics include: safety, security, ethics, or ownership, sharing, and innovation.</h3>
 +
<p><span onClick="requirements();"><a href="#_safety">Link to Safety Questions </a></span></p>
 +
<p><span onClick="eeeeeenote();"><a href="#_enote1">Link to E' NOTE effects on Human Practices </a></span></p>
 +
<h3>OR</h3>
 +
<h3>2b. In place of requirement two, a team may instead use SBOL in your software documentation.</h3>
 +
<p>The sequences, written by SBOL, can be input into Brick Worker to be optimized.</p>
 +
<h3>PLUS</h3>
 +
<h3>3a. Develop and document a new technical standard that supports one of the following:</h3>
 +
<h3>1. design of BioBrick Parts or Devices</br>
 +
2. construction of BioBrick Parts or Devices</br>
 +
3. characterization of BioBrick Parts or Devices</br>
 +
4. the analysis, modeling, and simulation of BioBrick Parts or Devices</br>
 +
5. the sharing of BioBrick Parts or Devices, either via physical DNA or as information via the internet.</h3>
 +
<p>Brick Worker fulfils first 4 tasks with BioBrick Parts. </p>
 +
<p>E' NOTE can share lab journals and other information within a team or a group via the Internet.</p>
 +
<h3>OR</h3>
 +
<h3>3b. Build upon existing software from a previous iGEM competition found on the The Registry of Software Tools</h3>
 +
<p>Brick Worker expands the evaluation range of SUSCT-Shenzhen-B, by which we can optimize all kinds of BioBricks.</p>
 +
</div></br></br>
 +
<div id="medals_silver">
 +
<h1><img src="https://static.igem.org/mediawiki/2013/2/22/Xmusoftware_Silver.png">&nbsp;&nbsp;&nbsp;Silver Medal</h1>
 +
<p>To earn a Silver Medal, in addition to the Bronze Medal requirements, a team must do ONE of the following:</p>
 +
<h3>1. Provide a detailed, draft specification for the next version of your software tool</h3>
 +
<div onClick="project_brickdemo();"><a href="#_demo"><p>Tutorial of Brick Worker</p></a></div>
 +
<div onClick="project_enote();"><a href="#_enotedemo"><p>Tutorial of E' NOTE</p></a></div>
 +
<h3>2. Provide a second, distinct (yet complementary) software tools project.</h3>
 +
<p>We design two softwares called Brick Worker and E' NOTE.</p>
 +
<h3>In addition the team must:</h3>
 +
<h3>1. Provide a demonstration of their software either as a textual or video tutorial made available on their wiki. This tutorial should explain all the features of the tool as well as provide sample input and output as appropriate.</h3>
 +
<div onClick="project_brickdemo();"><a href="#_demo"><p>Tutorial of Brick Worker</p></a></div>
 +
<div onClick="project_enote();"><a href="#_enotedemo"><p>Tutorial of E' NOTE</p></a></div></br>
 +
 +
</div>
 +
<div id="medals_bronze">
 +
<h1><img src="https://static.igem.org/mediawiki/2013/c/c8/Xmusoftware_Bronze.png">&nbsp;&nbsp;&nbsp;Bronze Medal</h1>
 +
<h3>1. Register the team, have a great summer, and have fun attending the Jamboree.</h3>
 +
<img src="https://static.igem.org/mediawiki/2013/5/50/Xmusoftware_Team.jpg">
 +
<h3>2. Create and share a description of the team's project via the iGEM wiki.</h3>
 +
<h3>3. Present a Poster and Talk at the iGEM Jamboree.</h3>
 +
<h3>4. Develop and make available via The Registry of Software Toolsan open source software tool that supports synthetic biology based on BioBrick standard biological parts (remember, the iGEM judges will be looking for substantial team-based software projects).</h3>
 +
<p>Our code can be found on <a href="https://github.com/igemsoftware/XMU_Software2013" target="blank">the Registry of Software Tools</a></p>
 +
</div>
 +
</div>
 +
</div>
</div>
</div>
</div>
</div>

Revision as of 10:54, 23 October 2013

REQUIREMENTS
Medals Safety Back To Top
Medals

   Gold Medal

To earn a Gold Medal, in addition to the Silver Medal requirements, a team must:

1.Have another team utilized the software developed by your team. You must clearly show how your software was used and the results that were obtained?

XMU-China used our software to kee their experimental records and put them on their wiki.

2a. Outline and detail how your software effects Human Practices in Synthetic Biology. Such topics include: safety, security, ethics, or ownership, sharing, and innovation.

Link to Safety Questions 

Link to E' NOTE effects on Human Practices 

OR

2b. In place of requirement two, a team may instead use SBOL in your software documentation.

The sequences, written by SBOL, can be input into Brick Worker to be optimized.

PLUS

3a. Develop and document a new technical standard that supports one of the following:

1. design of BioBrick Parts or Devices
2. construction of BioBrick Parts or Devices
3. characterization of BioBrick Parts or Devices
4. the analysis, modeling, and simulation of BioBrick Parts or Devices
5. the sharing of BioBrick Parts or Devices, either via physical DNA or as information via the internet.

Brick Worker fulfils first 4 tasks with BioBrick Parts.

E' NOTE can share lab journals and other information within a team or a group via the Internet.

OR

3b. Build upon existing software from a previous iGEM competition found on the The Registry of Software Tools

Brick Worker expands the evaluation range of SUSCT-Shenzhen-B, by which we can optimize all kinds of BioBricks.



   Silver Medal

To earn a Silver Medal, in addition to the Bronze Medal requirements, a team must do ONE of the following:

1. Provide a detailed, draft specification for the next version of your software tool

2. Provide a second, distinct (yet complementary) software tools project.

We design two softwares called Brick Worker and E' NOTE.

In addition the team must:

1. Provide a demonstration of their software either as a textual or video tutorial made available on their wiki. This tutorial should explain all the features of the tool as well as provide sample input and output as appropriate.


   Bronze Medal

1. Register the team, have a great summer, and have fun attending the Jamboree.

2. Create and share a description of the team's project via the iGEM wiki.

3. Present a Poster and Talk at the iGEM Jamboree.

4. Develop and make available via The Registry of Software Toolsan open source software tool that supports synthetic biology based on BioBrick standard biological parts (remember, the iGEM judges will be looking for substantial team-based software projects).

Our code can be found on the Registry of Software Tools

Retrieved from "http://2013.igem.org/Team:XMU_Software/Requirements"